BLASTX nr result

ID: Bupleurum21_contig00012383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012383
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]      105   5e-21
gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]       99   4e-19
emb|CBI27170.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002524124.1| ATPP2-A2, putative [Ricinus communis] gi|223...    91   1e-16
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16

>gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]
          Length = 179

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
 Frame = -3

Query: 414 LLNVCWLEIDGKYSMQKLTEGINYEVKFLVKLLNNFNIDKPVKLSLTTPDGCKQEHNENM 235
           L+ VCWL+IDG Y+ + L +G+ Y V F+V+L +N  ++ PV L LT P+G  +EH E++
Sbjct: 65  LIEVCWLQIDGTYNARNLNKGVKYGVYFVVELNSNPCMNGPVTLKLTRPNGSPEEHKEDL 124

Query: 234 MGMPRNQIIGITAGEFQTPRSNCGCGEIKFSMMNTDG-FWKNGLEVIGALIVP 79
              PRN+ +G+  GEF    S C    +KFSM   DG  WK GL VIGA IVP
Sbjct: 125 QTKPRNKWVGLKVGEFTNTASGCD-NTVKFSMNGCDGTTWKTGLTVIGAAIVP 176


>gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]
          Length = 181

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
 Frame = -3

Query: 414 LLNVCWLEIDGKYSMQKLTEGINYEVKFLVKLLNNFNIDKPVKLSLTTPDGCKQEHNENM 235
           L+ VCWL+IDGKYS  KL +G+ Y V F+VKL  N  ++  V L LT PDG      +++
Sbjct: 68  LIEVCWLQIDGKYSASKLNQGVKYGVYFIVKLKTNLRLNGKVTLKLTRPDGRTVVTRDDL 127

Query: 234 MGMPRNQIIGITAGEFQTPRSNCGCGEIKFSMMNTDG-FWKNGLEVIGALIVP 79
              P+N  + +  GEF T    C    +KFSM   DG  WK+GL VIGA+IVP
Sbjct: 128 DKRPKNTWVALKVGEFMTNARTCH-RNVKFSMNGCDGTSWKSGLVVIGAVIVP 179


>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
 Frame = -3

Query: 414 LLNVCWLEIDGKYSMQKLTEGINYEVKFLVKLLNN-FNIDKPVKLSLTTPDGCKQEHNEN 238
           L+NVCWLE+ GK+   KL+ GI Y+V F+V + +  +    PV L L  PDG  QEH EN
Sbjct: 126 LINVCWLEVHGKFETAKLSPGIMYKVAFVVMMKDPAYGWGVPVNLKLALPDGNTQEHKEN 185

Query: 237 MMGMPRNQIIGITAGEFQTPRSNCGCGEIKFSMMNTD-GFWKNGLEVIGALIVPK 76
           +   P+ Q I I  G+FQT   N   GEI+FS+   + G WK+GL V G +I PK
Sbjct: 186 LREKPKGQWIEIPVGQFQTSAEN--IGEIEFSLFEYEGGDWKSGLVVKGVIIQPK 238


>ref|XP_002524124.1| ATPP2-A2, putative [Ricinus communis] gi|223536591|gb|EEF38235.1|
           ATPP2-A2, putative [Ricinus communis]
          Length = 213

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
 Frame = -3

Query: 414 LLNVCWLEIDGKYSMQKLTEGINYEVKFLVKLLNN-FNIDKPVKLSLTTPDGCKQEHNEN 238
           LLNVCWLEI G++   KL+ GI YE  FL+ L +  +  + PV L LT P+G KQEH E 
Sbjct: 93  LLNVCWLEIHGRFDTAKLSPGILYEAVFLIMLKDPAYGWEVPVNLRLTLPNGTKQEHKEY 152

Query: 237 MMGMPRNQIIGITAGEFQTPRSNCGCGEIKFSMMNTD-GFWKNGLEVIGALIVPK 76
           ++  PR Q I + AGEF +   N   G I+ SM + + G WK GL V G  + PK
Sbjct: 153 VVTKPRAQWIEVPAGEFVSSPDN--IGRIEISMYDYEGGKWKRGLVVKGVTLRPK 205


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 53/115 (46%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
 Frame = -3

Query: 414 LLNVCWLEIDGKYSMQKLTEGINYEVKFLVKLLN-NFNIDKPVKLSLTTPDGCKQEHNEN 238
           LL+VCWLEI GK++ + L+ GI YEV F++KL +  +    PV +SL  P+G KQE  E 
Sbjct: 167 LLDVCWLEIYGKFNTKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEK 226

Query: 237 MMGMPRNQIIGITAGEFQTPRSNCGCGEIKFSMMNTD-GFWKNGLEVIGALIVPK 76
           +   PR Q I +  GEF T   N   GEI+F M   D G WK GL + G  I PK
Sbjct: 227 LQTKPREQWIEVPVGEFITSPEN--VGEIQFGMHEYDGGEWKRGLVIKGIAIRPK 279


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