BLASTX nr result

ID: Bupleurum21_contig00012380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012380
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [M...    58   7e-07
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...    58   9e-07
emb|CBI22072.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica...    57   2e-06
ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica...    57   2e-06

>ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355518665|gb|AET00289.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 1190

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +3

Query: 270 QKLGSLLVHPMIGKMLFFSILLNCLDPTLTLAC 368
           +KLGSL VHP+I +MLFF+IL+NCLDP LTLAC
Sbjct: 758 EKLGSLPVHPLISRMLFFAILMNCLDPALTLAC 790


>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
           vinifera]
          Length = 1231

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +3

Query: 270 QKLGSLLVHPMIGKMLFFSILLNCLDPTLTLAC 368
           +KLGSL VHP+  KMLFF+ILLNCLDP LTLAC
Sbjct: 762 KKLGSLPVHPLTSKMLFFAILLNCLDPALTLAC 794


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +3

Query: 270 QKLGSLLVHPMIGKMLFFSILLNCLDPTLTLAC 368
           +KLGSL VHP+  KMLFF+ILLNCLDP LTLAC
Sbjct: 750 KKLGSLPVHPLTSKMLFFAILLNCLDPALTLAC 782


>ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
           max]
          Length = 1164

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +3

Query: 270 QKLGSLLVHPMIGKMLFFSILLNCLDPTLTLAC 368
           +KLGSL VHP+I +MLFF+IL+NCLDP LTLAC
Sbjct: 766 EKLGSLPVHPLICRMLFFAILMNCLDPALTLAC 798


>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
           max]
          Length = 1162

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +3

Query: 270 QKLGSLLVHPMIGKMLFFSILLNCLDPTLTLAC 368
           +KLGSL VHP+I +MLFF+IL+NCLDP LTLAC
Sbjct: 764 EKLGSLPVHPLICRMLFFAILMNCLDPALTLAC 796


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