BLASTX nr result

ID: Bupleurum21_contig00012375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012375
         (2577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   845   0.0  
ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   835   0.0  
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   833   0.0  
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   827   0.0  
ref|XP_002267581.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   816   0.0  

>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
            vinifera]
          Length = 622

 Score =  845 bits (2184), Expect = 0.0
 Identities = 436/567 (76%), Positives = 468/567 (82%), Gaps = 22/567 (3%)
 Frame = -2

Query: 2276 MPTSWADSVXXXXXXXXXXXXG--------------RSAYVPPHLRNRPPSSDSLATVQS 2139
            M TSWADSV                           RS+YVPPHLRNRPPSSD  A   +
Sbjct: 1    MRTSWADSVANSTSDNLVSGSSDNSGFGAGAPSRSGRSSYVPPHLRNRPPSSDPPAPSYT 60

Query: 2138 GSTSGNVA--LGGNRWAAPXXXXXXXXXXXXXXXXXXXXXXXXXG------WDRGKEREA 1983
               S       GG RW                                   WDRG++RE 
Sbjct: 61   SQASAGYGGPPGGTRWGGGSRADFGRSGVTTGVTSGGRVGGSSGWNTRSGGWDRGRDREV 120

Query: 1982 NPFDNDDSVEPDVGEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGDALNRNIQR 1803
            NPF +DD+ EP   EQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLG+ALN+NI+R
Sbjct: 121  NPFGDDDNAEPAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRR 180

Query: 1802 CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTNQFAQRAPRMPRM 1623
            CKYVKPTPVQRHAIPISL+G+DLMACAQTGSGKTAAFCFPIISGIMT QFAQR PR  R 
Sbjct: 181  CKYVKPTPVQRHAIPISLSGKDLMACAQTGSGKTAAFCFPIISGIMTGQFAQR-PRGART 239

Query: 1622 SCPLALILSPTRELSCQIHEEARKFAYQTGVKVVVAYGGAPINQQLRELERGVDILVATP 1443
              PLALILSPTRELSCQIH+EARKF+YQTGVKVVVAYGGAPINQQLRELERGVDILVATP
Sbjct: 240  VYPLALILSPTRELSCQIHDEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATP 299

Query: 1442 GRLVDLLERARVSLQLIKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSAT 1263
            GRLVDLLERARVSLQ+I+YLALDEADRMLDMGFEPQIRKIV+QMDMPPPG+RQTMLFSAT
Sbjct: 300  GRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSAT 359

Query: 1262 FPKEIQRLASDFLANYIFLAVGRVGSSTDLILQRVEYVQESDKRSHLMDLLHAQRANGAH 1083
            FPKEIQRLASDFL++YIFLAVGRVGSSTDLI+QRVE+V ESDKRSHLMDLLHAQRANGAH
Sbjct: 360  FPKEIQRLASDFLSSYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAH 419

Query: 1082 GKQALTLVFVETKKGADSLEYWLCSNGFPATTIHGDRSQMEREQALRSFKSGHTPILVAT 903
            GKQ+LTLVFVETKKGADSLE+WLC NGFPATTIHGDR+Q ERE ALRSFKSG+TPILVAT
Sbjct: 420  GKQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREHALRSFKSGNTPILVAT 479

Query: 902  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLSE 723
            DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFNENNSS+AR L++
Sbjct: 480  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARPLAD 539

Query: 722  LMQEANQEVPAWLSRFAARAVYSGGKN 642
            LMQEANQEVPAWL+R+A+RA Y GGKN
Sbjct: 540  LMQEANQEVPAWLTRYASRASYGGGKN 566


>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine max]
          Length = 614

 Score =  835 bits (2157), Expect = 0.0
 Identities = 426/525 (81%), Positives = 457/525 (87%), Gaps = 2/525 (0%)
 Frame = -2

Query: 2210 RSAYVPPHLRNRPPSSDSLATVQ--SGSTSGNVALGGNRWAAPXXXXXXXXXXXXXXXXX 2037
            R  YVPPHLRNR P+++S A     SG +SG     G+R+AAP                 
Sbjct: 36   RPVYVPPHLRNRQPAAESPAPAPAYSGPSSG-AGNSGSRYAAPRNDYRPGYGGGGGGRTG 94

Query: 2036 XXXXXXXXGWDRGKEREANPFDNDDSVEPDVGEQENTGINFDAYEDIPVETSGDNVPPPV 1857
                     WDRG+ERE NPF+ +D+ E    EQENTGINFDAYEDIPVETSGDNVPPPV
Sbjct: 95   GWGNKSGG-WDRGREREVNPFEEEDNAEEAFSEQENTGINFDAYEDIPVETSGDNVPPPV 153

Query: 1856 NTFAEIDLGDALNRNIQRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPII 1677
            NTFAEIDLG+ALN+NI+RCKYV+PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPII
Sbjct: 154  NTFAEIDLGEALNQNIRRCKYVRPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPII 213

Query: 1676 SGIMTNQFAQRAPRMPRMSCPLALILSPTRELSCQIHEEARKFAYQTGVKVVVAYGGAPI 1497
            SGIM  Q  QR PR  R   PLAL+LSPTRELS QIHEEARKF+YQTGV+VVVAYGGAPI
Sbjct: 214  SGIMRGQSVQRPPRGVRTVYPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPI 273

Query: 1496 NQQLRELERGVDILVATPGRLVDLLERARVSLQLIKYLALDEADRMLDMGFEPQIRKIVQ 1317
            NQQLR+LERGVDILVATPGRLVDLLERARVSLQ+I+YLALDEADRMLDMGFEPQIRKIV+
Sbjct: 274  NQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVE 333

Query: 1316 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLILQRVEYVQESD 1137
            QMDMPPPG RQTMLFSATFPKEIQRLASDFL+NYIFLAVGRVGSSTDLI+QRVEYVQESD
Sbjct: 334  QMDMPPPGARQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESD 393

Query: 1136 KRSHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLEYWLCSNGFPATTIHGDRSQMER 957
            KRSHLMDLLHAQRANG  GKQALTLVFVETKKGADSLE+WLC NGFPATTIHGDRSQ ER
Sbjct: 394  KRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQER 453

Query: 956  EQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 777
            E ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK GL
Sbjct: 454  ELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGL 513

Query: 776  ATAFFNENNSSMARSLSELMQEANQEVPAWLSRFAARAVYSGGKN 642
            ATAFFN+NNSS+AR+LSELMQEANQEVPAWLSRFAAR+ + GG+N
Sbjct: 514  ATAFFNDNNSSLARALSELMQEANQEVPAWLSRFAARSSFGGGRN 558


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine max]
          Length = 619

 Score =  833 bits (2151), Expect = 0.0
 Identities = 426/531 (80%), Positives = 458/531 (86%), Gaps = 8/531 (1%)
 Frame = -2

Query: 2210 RSAYVPPHLRNRPPSSDSLATVQS--------GSTSGNVALGGNRWAAPXXXXXXXXXXX 2055
            R  YVPPHLRNR P+++S A   +        GS+SG     G+R+AAP           
Sbjct: 36   RPVYVPPHLRNRQPAAESPAPAPAYSGPSSGAGSSSG-AGNSGSRYAAPRNDYRPGYGGG 94

Query: 2054 XXXXXXXXXXXXXXGWDRGKEREANPFDNDDSVEPDVGEQENTGINFDAYEDIPVETSGD 1875
                           WDRG+ERE NPF+ +D+ E    EQENTGINFDAYEDIPVETSGD
Sbjct: 95   GGRTGGWGNKSGG--WDRGREREVNPFEEEDNAEEAFSEQENTGINFDAYEDIPVETSGD 152

Query: 1874 NVPPPVNTFAEIDLGDALNRNIQRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAA 1695
            NVPPPVNTFAEIDLG+ALN+NI+RCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAA
Sbjct: 153  NVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAA 212

Query: 1694 FCFPIISGIMTNQFAQRAPRMPRMSCPLALILSPTRELSCQIHEEARKFAYQTGVKVVVA 1515
            FCFPIISGIM  Q  QR PR  R   PLAL+LSPTRELS QIHEEARKF+YQTGV+VVVA
Sbjct: 213  FCFPIISGIMRGQPVQRPPRGVRTVYPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVA 272

Query: 1514 YGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQLIKYLALDEADRMLDMGFEPQ 1335
            YGGAPINQQLR+LERGVDILVATPGRLVDLLERARVSLQ+I+YLALDEADRMLDMGFEPQ
Sbjct: 273  YGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 332

Query: 1334 IRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLILQRVE 1155
            IRKIV+QMDMPPPG RQTMLFSATFPKEIQRLASDFL+NYIFLAVGRVGSSTDLI+QRVE
Sbjct: 333  IRKIVEQMDMPPPGARQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVE 392

Query: 1154 YVQESDKRSHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLEYWLCSNGFPATTIHGD 975
            YVQESDKRSHLMDLLHAQRANG  GKQALTLVFVETKKGADSLE+WLC NGFPATTIHGD
Sbjct: 393  YVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLCLNGFPATTIHGD 452

Query: 974  RSQMEREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 795
            RSQ ERE ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR
Sbjct: 453  RSQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 512

Query: 794  AGKSGLATAFFNENNSSMARSLSELMQEANQEVPAWLSRFAARAVYSGGKN 642
            AGK GLATAFFN+NNSS+AR+LSELMQEANQEVPAWLSR+AAR+ + GG+N
Sbjct: 513  AGKKGLATAFFNDNNSSLARALSELMQEANQEVPAWLSRYAARSSFGGGRN 563


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
            gi|147854540|emb|CAN78578.1| hypothetical protein
            VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  827 bits (2137), Expect = 0.0
 Identities = 425/556 (76%), Positives = 460/556 (82%), Gaps = 14/556 (2%)
 Frame = -2

Query: 2276 MPTSWADSVXXXXXXXXXXXXG------------RSAYVPPHLRNRPPSSDSLATVQSGS 2133
            M +SWADSV                         R AY+PPHLRN  PSS+  A   SG 
Sbjct: 1    MRSSWADSVVNSAAENVAAGSSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYSGP 60

Query: 2132 TSGNVALG--GNRWAAPXXXXXXXXXXXXXXXXXXXXXXXXXGWDRGKEREANPFDNDDS 1959
            +S N   G  GNRW  P                          WDRG+ERE NPF +D  
Sbjct: 61   SSANDRSGYSGNRWGGPRNDSNQTGYSSGGRTGGWNNKSGG--WDRGREREVNPFGDDVD 118

Query: 1958 VEPDVGEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGDALNRNIQRCKYVKPTP 1779
             E    EQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLG+ALN+NI+RCKYVKPTP
Sbjct: 119  TEKVFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIKRCKYVKPTP 178

Query: 1778 VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTNQFAQRAPRMPRMSCPLALIL 1599
            VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM  Q +QR PR  R   PLALIL
Sbjct: 179  VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQASQRPPRGARTVYPLALIL 238

Query: 1598 SPTRELSCQIHEEARKFAYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 1419
            SPTRELSCQIH+EA+KF+YQTGVKVVVAYGGAPI+QQLR+LERGVDILVATPGRLVDLLE
Sbjct: 239  SPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPISQQLRDLERGVDILVATPGRLVDLLE 298

Query: 1418 RARVSLQLIKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 1239
            RARVSLQ+I+YLALDEADRMLDMGFEPQIRKIV+QMDMPP G+RQTMLFSATFPKEIQ+L
Sbjct: 299  RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPQGVRQTMLFSATFPKEIQKL 358

Query: 1238 ASDFLANYIFLAVGRVGSSTDLILQRVEYVQESDKRSHLMDLLHAQRANGAHGKQALTLV 1059
            ASDFL+NY+FLAVGRVGSSTDLI+QRVE+V ++DKRSHLMDLLHAQRANG HGKQ LTLV
Sbjct: 359  ASDFLSNYVFLAVGRVGSSTDLIVQRVEFVHDTDKRSHLMDLLHAQRANGVHGKQYLTLV 418

Query: 1058 FVETKKGADSLEYWLCSNGFPATTIHGDRSQMEREQALRSFKSGHTPILVATDVAARGLD 879
            FVETKKGADSLE+WLC NGFPATTIHGDR+Q EREQALRSFKSG TPILVATDVAARGLD
Sbjct: 419  FVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREQALRSFKSGVTPILVATDVAARGLD 478

Query: 878  IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLSELMQEANQE 699
            IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFN+NNSS+A++LSELMQEANQE
Sbjct: 479  IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSLAKALSELMQEANQE 538

Query: 698  VPAWLSRFAARAVYSG 651
            VPAWLSR+AAR+ Y G
Sbjct: 539  VPAWLSRYAARSPYVG 554


>ref|XP_002267581.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
            vinifera]
          Length = 617

 Score =  816 bits (2109), Expect = 0.0
 Identities = 414/521 (79%), Positives = 449/521 (86%)
 Frame = -2

Query: 2210 RSAYVPPHLRNRPPSSDSLATVQSGSTSGNVALGGNRWAAPXXXXXXXXXXXXXXXXXXX 2031
            RSAYVPPHLRNRPPSS       S   + N   GG                         
Sbjct: 45   RSAYVPPHLRNRPPSSTPPPPAVSAPPAANTRWGGGGGGG---------GRSGGSFGGAA 95

Query: 2030 XXXXXXGWDRGKEREANPFDNDDSVEPDVGEQENTGINFDAYEDIPVETSGDNVPPPVNT 1851
                  GWDRG+ERE NPF +D  VEP   +QEN+GINFDAYEDIPV+TSGDNVPP VN+
Sbjct: 96   SNTRTGGWDRGREREVNPFGDDVDVEPPFVQQENSGINFDAYEDIPVDTSGDNVPPAVNS 155

Query: 1850 FAEIDLGDALNRNIQRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISG 1671
            F+EIDLGDALN NI+RCKYVKPTPVQRHAIPIS+AGRDLMACAQTGSGKTAAFCFPIISG
Sbjct: 156  FSEIDLGDALNLNIRRCKYVKPTPVQRHAIPISIAGRDLMACAQTGSGKTAAFCFPIISG 215

Query: 1670 IMTNQFAQRAPRMPRMSCPLALILSPTRELSCQIHEEARKFAYQTGVKVVVAYGGAPINQ 1491
            IM  Q+AQR PR  R + PLALILSPTRELSCQIH+EA+KF+YQTGV+VVVAYGGAPINQ
Sbjct: 216  IMKGQYAQR-PRGSRTAYPLALILSPTRELSCQIHDEAKKFSYQTGVRVVVAYGGAPINQ 274

Query: 1490 QLRELERGVDILVATPGRLVDLLERARVSLQLIKYLALDEADRMLDMGFEPQIRKIVQQM 1311
            QLR+LERGVDILVATPGRLVDLLERAR+SLQ+++YLALDEADRMLDMGFEPQIR+IV+QM
Sbjct: 275  QLRDLERGVDILVATPGRLVDLLERARISLQMVQYLALDEADRMLDMGFEPQIRRIVEQM 334

Query: 1310 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLILQRVEYVQESDKR 1131
            DMPP G+RQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI+QRVE+VQESDKR
Sbjct: 335  DMPPRGVRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESDKR 394

Query: 1130 SHLMDLLHAQRANGAHGKQALTLVFVETKKGADSLEYWLCSNGFPATTIHGDRSQMEREQ 951
            SHLMDLLHAQR NG HGKQALTLVFVETKKGAD+LE+WLC NGFPAT+IHGDRSQ ERE 
Sbjct: 395  SHLMDLLHAQRENGTHGKQALTLVFVETKKGADALEHWLCINGFPATSIHGDRSQQEREH 454

Query: 950  ALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 771
            ALR FKSG TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLAT
Sbjct: 455  ALRLFKSGATPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLAT 514

Query: 770  AFFNENNSSMARSLSELMQEANQEVPAWLSRFAARAVYSGG 648
            AFFNENNSS+AR L+ELMQE+NQEVPAWLSR+AAR+ Y GG
Sbjct: 515  AFFNENNSSLARGLAELMQESNQEVPAWLSRYAARSSYGGG 555


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