BLASTX nr result
ID: Bupleurum21_contig00012361
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012361
(1472 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containin... 622 e-175
ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containin... 611 e-172
ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containin... 603 e-170
emb|CBI27906.3| unnamed protein product [Vitis vinifera] 602 e-169
ref|XP_002514115.1| nucleic acid binding protein, putative [Rici... 593 e-167
>ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Vitis
vinifera]
Length = 607
Score = 622 bits (1603), Expect = e-175
Identities = 300/449 (66%), Positives = 353/449 (78%), Gaps = 7/449 (1%)
Frame = +2
Query: 143 LFLTNEWPSGILNGVPTTDIPPGISDLSGSDSTVSELVAEIKPRYHIAGSRGMFYAREPY 322
LFLTNEWPSG+ G T++IPPGISD SG DS +SELV EIKPRYHIAG++G+FY REPY
Sbjct: 157 LFLTNEWPSGVTKGAVTSNIPPGISDSSGCDSAISELVGEIKPRYHIAGTKGIFYDREPY 216
Query: 323 VNIDAVHVTRFIGLAPVGNSDKQKFIHXXXXXXXXXXXXXXXXXKPTNTTSSPYVFLDKV 502
N+DAVHVTRF+GLAPVGN DKQKFIH KP NTT PY +++
Sbjct: 217 SNLDAVHVTRFLGLAPVGNKDKQKFIHAISPIPASTMSSAEISMKPPNTTLFPYKIIEET 276
Query: 503 S--HNGGKRSSEDISDSQYWRYDVSKKRQKHG--DDDRLCFKFISSGSCPRGEQCHFRHD 670
+ + KR S+ ISD+QYWRYDVS+KRQKHG D D+LCFKF+SSGSCPRG +C+F HD
Sbjct: 277 APTNQATKRPSDSISDTQYWRYDVSQKRQKHGAGDGDKLCFKFVSSGSCPRGNKCNFLHD 336
Query: 671 MEAREQSLRGVCFDFLNKGRCERGPDCNFKHSLQEEGENASIRRPKD---KSDRSKECWF 841
EAREQ +RGVCFDF+NKG+CERGPDCNFKHSLQ+E E + RR KS RSK CWF
Sbjct: 337 TEAREQYMRGVCFDFINKGKCERGPDCNFKHSLQDEDEGFASRRSGSENAKSSRSKRCWF 396
Query: 842 CLSSPNVESHLITSIGEHCYSALAKGPLVPDHVLILPVEHLPNTLSSPQECEIDILRFQN 1021
CLSSP+VESHLI SIGE Y ALAKGPLV D VL++PVEH NTLS P ECEI++ RFQ
Sbjct: 397 CLSSPDVESHLIISIGESYYCALAKGPLVEDQVLVIPVEHSANTLSLPPECEIELDRFQK 456
Query: 1022 SLRSYFREQSKEVVFFEWIFVRGTHANLQAIPIPSSRAASLNEVFSLAAKRMGFKFDILK 1201
SL+ YFR Q KEVVFFEWIF RGTHAN+QA+PIP SRA+++ +F LAA+++GF+F K
Sbjct: 457 SLKMYFRTQGKEVVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTK 516
Query: 1202 NSTSSEGRNALREQFNRNCSLFYVELPGGTILSHAVEENEKFPAQFGREVLAGLLNMADR 1381
++ SEGR +LR QF+ S FYVELP GTILSHA+E+NEKFP QFGREVLAGLLNMADR
Sbjct: 517 SNNDSEGRKSLRAQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADR 576
Query: 1382 ADWRNCKLSKDEEIKMAENFKNSFEKYDP 1468
ADWRNCK SK++E+KMAE FKN F+K+DP
Sbjct: 577 ADWRNCKQSKEDEMKMAEVFKNQFKKFDP 605
>ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
[Glycine max]
Length = 601
Score = 611 bits (1575), Expect = e-172
Identities = 299/447 (66%), Positives = 352/447 (78%), Gaps = 4/447 (0%)
Frame = +2
Query: 143 LFLTNEWPSGILNGVPTTDIPPGISDLSGSDSTVSELVAEIKPRYHIAGSRGMFYAREPY 322
LFLTNEWPSG+ N +DIP G+SD +G DSTVSELV EIKPRYHIAG++G++YAREPY
Sbjct: 156 LFLTNEWPSGVTNRAADSDIPAGLSDAAGGDSTVSELVQEIKPRYHIAGTKGIYYAREPY 215
Query: 323 VNIDAVHVTRFIGLAPVGNSDKQKFIHXXXXXXXXXXXXXXXXXKPTNTTSSPYVFLDKV 502
N+DAVHVTRFIGLA VGN DKQKFIH K TNTT SPY + +K
Sbjct: 216 SNVDAVHVTRFIGLASVGNKDKQKFIHAISPTPASTMSSTEIAMKTTNTTLSPYTYEEKR 275
Query: 503 SH--NGGKRSSEDISDSQYWRYDVSKKRQKH--GDDDRLCFKFISSGSCPRGEQCHFRHD 670
+ + KRSS+ ISD QYWRYDVS+KRQKH G D+LCFKF+SSGSCPRGE+C+FRHD
Sbjct: 276 TSPMDSTKRSSDSISDPQYWRYDVSQKRQKHEAGHGDKLCFKFVSSGSCPRGEKCNFRHD 335
Query: 671 MEAREQSLRGVCFDFLNKGRCERGPDCNFKHSLQEEGENASIRRPKDKSDRSKECWFCLS 850
+AREQ +RGVCFDFLNKG+CERGPDCNFKHSLQ+EG RRP S RSKECWFCLS
Sbjct: 336 TDAREQCMRGVCFDFLNKGKCERGPDCNFKHSLQDEGGRLPSRRPG--SGRSKECWFCLS 393
Query: 851 SPNVESHLITSIGEHCYSALAKGPLVPDHVLILPVEHLPNTLSSPQECEIDILRFQNSLR 1030
SPNVESHLI SIGE+ Y ALAKGPLV DHVLI+PVEH+P+TLS E EI++ RFQNSL+
Sbjct: 394 SPNVESHLIISIGENYYLALAKGPLVEDHVLIIPVEHMPSTLSMSSESEIELSRFQNSLK 453
Query: 1031 SYFREQSKEVVFFEWIFVRGTHANLQAIPIPSSRAASLNEVFSLAAKRMGFKFDILKNST 1210
SY + Q KEV+FFEW+ VRGTHAN+QAIPIPSS+A ++F+LAA+++GF+F K +
Sbjct: 454 SYCKSQEKEVIFFEWVSVRGTHANIQAIPIPSSKAIMAEKIFNLAAQKLGFEFVTKKFDS 513
Query: 1211 SSEGRNALREQFNRNCSLFYVELPGGTILSHAVEENEKFPAQFGREVLAGLLNMADRADW 1390
SEGR L+ Q + + SLFY ++PGGTIL H VEE EKFPAQFGREVLAGLLNMAD ADW
Sbjct: 514 ISEGRKFLKAQIDGDSSLFYAQIPGGTILLHHVEEKEKFPAQFGREVLAGLLNMADNADW 573
Query: 1391 RNCKLSKDEEIKMAENFKNSFEKYDPN 1471
RN K SKDEE+K+ E FK+ F++YDPN
Sbjct: 574 RNRKHSKDEEMKIVEVFKSRFQEYDPN 600
>ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
[Cucumis sativus] gi|449489882|ref|XP_004158448.1|
PREDICTED: zinc finger CCCH domain-containing protein
64-like [Cucumis sativus]
Length = 606
Score = 603 bits (1554), Expect = e-170
Identities = 290/449 (64%), Positives = 348/449 (77%), Gaps = 6/449 (1%)
Frame = +2
Query: 143 LFLTNEWPSGILNGVPTTDIPPGISDLSGSDSTVSELVAEIKPRYHIAGSRGMFYAREPY 322
LFL+NEWP+ + N VPT+DIPPG+SDLSGSD+T+SELV EIKPRYHIAG++G+F+AREPY
Sbjct: 157 LFLSNEWPTEVTNRVPTSDIPPGVSDLSGSDATISELVVEIKPRYHIAGTKGVFFAREPY 216
Query: 323 VNIDAVHVTRFIGLAPVGNSDKQKFIHXXXXXXXXXXXXXXXXXKPTNTTSSPYVFLDKV 502
N+DAVHVTRF+GLA VGN +KQKFIH KP NTT SPY ++
Sbjct: 217 SNVDAVHVTRFLGLASVGNKEKQKFIHAISPIPSSTMSAVEISMKPPNTTLSPYTLTERK 276
Query: 503 SH--NGGKRSSEDISDSQYWRYDVSKKRQKHG--DDDRLCFKFISSGSCPRGEQCHFRHD 670
S + KRSS +S+SQYWRY+VS+KRQK+G D ++LCFKF SSGSCPRGE+C+F HD
Sbjct: 277 SEASDSAKRSSNSVSESQYWRYEVSQKRQKYGTSDTNKLCFKFTSSGSCPRGEKCNFHHD 336
Query: 671 MEAREQSLRGVCFDFLNKGRCERGPDCNFKHSLQEEGENASIRRPKDKS--DRSKECWFC 844
M+AREQS RGVCFDFLNKG+CERGPDCNFKHS Q E ++ S +R + +RSKECWFC
Sbjct: 337 MDAREQSQRGVCFDFLNKGKCERGPDCNFKHSFQNEFDSHSGKRRSGNAGTNRSKECWFC 396
Query: 845 LSSPNVESHLITSIGEHCYSALAKGPLVPDHVLILPVEHLPNTLSSPQECEIDILRFQNS 1024
LSSPN+ESHLI S+GE Y ALAKGPLVPDH+L++PVEH PNTLS + E +I R QN
Sbjct: 397 LSSPNIESHLIVSVGESFYCALAKGPLVPDHILVIPVEHFPNTLSLGPDYETEINRLQNC 456
Query: 1025 LRSYFREQSKEVVFFEWIFVRGTHANLQAIPIPSSRAASLNEVFSLAAKRMGFKFDILKN 1204
LR YF+ Q KEVVFFEW+ R THANLQA+PIPSSRA + +F +AA+++GFKF I K+
Sbjct: 457 LRKYFKSQGKEVVFFEWVSKRSTHANLQAVPIPSSRAHVVQNIFDMAAEKLGFKFVISKS 516
Query: 1205 STSSEGRNALREQFNRNCSLFYVELPGGTILSHAVEENEKFPAQFGREVLAGLLNMADRA 1384
SEGR +LR QF+ + S FY ELP LSH +EENE FPAQFGREVLAGLLNMAD+A
Sbjct: 517 DAPSEGRKSLRTQFDSDHSFFYAELPECVTLSHVIEENEIFPAQFGREVLAGLLNMADKA 576
Query: 1385 DWRNCKLSKDEEIKMAENFKNSFEKYDPN 1471
DWRNC SK+EE KMAE+FK FE +DPN
Sbjct: 577 DWRNCAHSKEEETKMAEDFKIRFENFDPN 605
>emb|CBI27906.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 602 bits (1551), Expect = e-169
Identities = 291/440 (66%), Positives = 344/440 (78%), Gaps = 7/440 (1%)
Frame = +2
Query: 170 GILNGVPTTDIPPGISDLSGSDSTVSELVAEIKPRYHIAGSRGMFYAREPYVNIDAVHVT 349
G+ G T++IPPGISD SG DS +SELV EIKPRYHIAG++G+FY REPY N+DAVHVT
Sbjct: 152 GVTKGAVTSNIPPGISDSSGCDSAISELVGEIKPRYHIAGTKGIFYDREPYSNLDAVHVT 211
Query: 350 RFIGLAPVGNSDKQKFIHXXXXXXXXXXXXXXXXXKPTNTTSSPYVFLDKVS--HNGGKR 523
RF+GLAPVGN DKQKFIH KP NTT PY +++ + + KR
Sbjct: 212 RFLGLAPVGNKDKQKFIHAISPIPASTMSSAEISMKPPNTTLFPYKIIEETAPTNQATKR 271
Query: 524 SSEDISDSQYWRYDVSKKRQKHG--DDDRLCFKFISSGSCPRGEQCHFRHDMEAREQSLR 697
S+ ISD+QYWRYDVS+KRQKHG D D+LCFKF+SSGSCPRG +C+F HD EAREQ +R
Sbjct: 272 PSDSISDTQYWRYDVSQKRQKHGAGDGDKLCFKFVSSGSCPRGNKCNFLHDTEAREQYMR 331
Query: 698 GVCFDFLNKGRCERGPDCNFKHSLQEEGENASIRRPKD---KSDRSKECWFCLSSPNVES 868
GVCFDF+NKG+CERGPDCNFKHSLQ+E E + RR KS RSK CWFCLSSP+VES
Sbjct: 332 GVCFDFINKGKCERGPDCNFKHSLQDEDEGFASRRSGSENAKSSRSKRCWFCLSSPDVES 391
Query: 869 HLITSIGEHCYSALAKGPLVPDHVLILPVEHLPNTLSSPQECEIDILRFQNSLRSYFREQ 1048
HLI SIGE Y ALAKGPLV D VL++PVEH NTLS P ECEI++ RFQ SL+ YFR Q
Sbjct: 392 HLIISIGESYYCALAKGPLVEDQVLVIPVEHSANTLSLPPECEIELDRFQKSLKMYFRTQ 451
Query: 1049 SKEVVFFEWIFVRGTHANLQAIPIPSSRAASLNEVFSLAAKRMGFKFDILKNSTSSEGRN 1228
KEVVFFEWIF RGTHAN+QA+PIP SRA+++ +F LAA+++GF+F K++ SEGR
Sbjct: 452 GKEVVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSNNDSEGRK 511
Query: 1229 ALREQFNRNCSLFYVELPGGTILSHAVEENEKFPAQFGREVLAGLLNMADRADWRNCKLS 1408
+LR QF+ S FYVELP GTILSHA+E+NEKFP QFGREVLAGLLNMADRADWRNCK S
Sbjct: 512 SLRAQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADRADWRNCKQS 571
Query: 1409 KDEEIKMAENFKNSFEKYDP 1468
K++E+KMAE FKN F+K+DP
Sbjct: 572 KEDEMKMAEVFKNQFKKFDP 591
>ref|XP_002514115.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223546571|gb|EEF48069.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 606
Score = 593 bits (1529), Expect = e-167
Identities = 285/448 (63%), Positives = 347/448 (77%), Gaps = 6/448 (1%)
Frame = +2
Query: 143 LFLTNEWPSGILNGVPTTDIPPGISDLSGSDSTVSELVAEIKPRYHIAGSRGMFYAREPY 322
LFLTNEWPSG+ N +DIP GISD GSDSTVSELVAEIKPRYHIAG++G+F+AREPY
Sbjct: 157 LFLTNEWPSGVTNRASISDIPTGISDSVGSDSTVSELVAEIKPRYHIAGTKGVFFAREPY 216
Query: 323 VNIDAVHVTRFIGLAPVGNSDKQKFIHXXXXXXXXXXXXXXXXXKPTNTTSSPYVFLDKV 502
N DAVHVTRF+GLA VGN DKQKFIH KP+NTT SPY F+++
Sbjct: 217 SNSDAVHVTRFLGLASVGNKDKQKFIHAISPTPGSTMTSAEISMKPSNTTLSPYTFIEQA 276
Query: 503 S--HNGGKRSSEDISDSQYWRYDVSKKRQKHG-DDDRLCFKFISSGSCPRGEQCHFRHDM 673
+ G KR S+ +SDSQYWRYDVS+KR + G D D+LCFKF+ SGSCPR E+CHF HDM
Sbjct: 277 AAPKEGTKRPSDSMSDSQYWRYDVSQKRHRTGADGDKLCFKFVFSGSCPREEKCHFLHDM 336
Query: 674 EAREQSLRGVCFDFLNKGRCERGPDCNFKHSLQEEGENASIRR---PKDKSDRSKECWFC 844
+AREQ RGVC DFL KG+CERGPDCNFKH+L EGE+ S RR ++RSKECWFC
Sbjct: 337 DAREQYSRGVCIDFLVKGKCERGPDCNFKHNLLSEGESYSHRRRGFENANTNRSKECWFC 396
Query: 845 LSSPNVESHLITSIGEHCYSALAKGPLVPDHVLILPVEHLPNTLSSPQECEIDILRFQNS 1024
LSSP VESHLI SIGE+ Y ALAKGPLV DH+L++P+EH PNTLS PQECE +++R + S
Sbjct: 397 LSSPGVESHLIISIGENYYCALAKGPLVQDHILLVPIEHSPNTLSLPQECESELVRLRKS 456
Query: 1025 LRSYFREQSKEVVFFEWIFVRGTHANLQAIPIPSSRAASLNEVFSLAAKRMGFKFDILKN 1204
L+ Y+ +Q KE + FEW RGTHANLQA+P+PSSRAA++ ++F++AA+++GFKF +K
Sbjct: 457 LKLYYNKQGKETILFEWASKRGTHANLQAVPVPSSRAAAVQDIFNMAAEKLGFKFVTMKF 516
Query: 1205 STSSEGRNALREQFNRNCSLFYVELPGGTILSHAVEENEKFPAQFGREVLAGLLNMADRA 1384
+ +S+GR LR QF+RN S FYVELP GT+LSH+V+ENE FPAQFGREVLAGLLNM +RA
Sbjct: 517 NNNSDGRKWLRTQFDRNYSFFYVELPDGTVLSHSVKENESFPAQFGREVLAGLLNMPERA 576
Query: 1385 DWRNCKLSKDEEIKMAENFKNSFEKYDP 1468
DWR C LSK+EE KM + K FE+ +P
Sbjct: 577 DWRTCTLSKEEETKMIDELKKQFEELNP 604