BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012345
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...    74   2e-11
ref|XP_002330570.1| high mobility group family [Populus trichoca...    70   2e-10
ref|XP_002531766.1| transcription factor, putative [Ricinus comm...    69   6e-10
ref|NP_566454.1| high mobility group-box and ARID domain-binding...    55   7e-06

>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
 Frame = +3

Query: 33  LKPGCSINGTIDAKCEWGYLISVDLGHEQLHGVMFHVPEDTGAVD--------------S 170
           L+PGC + GTID K + GYL+SV+LG + L GV++H+P +   +                
Sbjct: 185 LQPGCLVTGTIDGKFDNGYLVSVNLGSDVLKGVLYHIPNNESHMSRSSNASAVPPPRNWK 244

Query: 171 QSQRRFRDPS-GTXXXXXXXXXXXXXXDKLKPLYGEHGEDMNKKIWLMWNRLSEADKQEW 347
           +SQ   RDPS                  +LKPLY      ++KKI  +WNRL++A+KQ +
Sbjct: 245 RSQLALRDPSRPKRSQSGYNFFFAENYARLKPLYSGQERAISKKIGFLWNRLTDAEKQVY 304

Query: 348 R 350
           +
Sbjct: 305 Q 305


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|222872128|gb|EEF09259.1| high mobility group family
           [Populus trichocarpa]
          Length = 316

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
 Frame = +3

Query: 21  ANSTLKPGCSINGTIDAKCEWGYLISVDLGHEQLHGVMFHVP------EDTGAVDSQSQR 182
           ++  L+ GCS++G ID K + GYL++V+LG  QL GV++H+P      +D+ + D   +R
Sbjct: 170 SSQQLQIGCSVSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIPHTFHESQDSRSSDLPPRR 229

Query: 183 R-------FRDPS-GTXXXXXXXXXXXXXXDKLKPLYGEHGEDMNKKIWLMWNRLSEADK 338
           R        RDPS                  +LKPL+    + ++KKI L+WN L+EA+K
Sbjct: 230 RRKRSRLALRDPSQPKSNRSGYNFFFTEHYAQLKPLHHGQEKVISKKIGLLWNNLTEAEK 289

Query: 339 QEWR 350
           Q ++
Sbjct: 290 QVYQ 293


>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
 Frame = +3

Query: 24  NSTLKPGCSINGTIDAKCEWGYLISVDLGHEQLHGVMFHVPEDTGAVDS----------- 170
           +S L+ G S+NGTID K + GYLI+V LG EQL GV++H+P +     S           
Sbjct: 168 SSQLQLGSSVNGTIDGKFDNGYLITVTLGSEQLKGVLYHIPNEFYMSQSSHNSDLPPRRH 227

Query: 171 --QSQRRFRDPS-GTXXXXXXXXXXXXXXDKLKPLYGEHGEDMNKKIWLMWNRLSEADKQ 341
             +S+   RDPS                  +LKPL+    + ++KKI L+WN L+EA+K+
Sbjct: 228 RKRSRLLLRDPSRPKSHRSGYNFFFAEHYAQLKPLHYGQEKVISKKIGLLWNNLTEAEKE 287


>ref|NP_566454.1| high mobility group-box and ARID domain-binding domain-containing
           protein [Arabidopsis thaliana]
           gi|75274126|sp|Q9LTT3.1|HMG10_ARATH RecName: Full=High
           mobility group B protein 10; AltName:
           Full=Nucleosome/chromatin assembly factor group D 10
           gi|13605513|gb|AAK32750.1|AF361582_1 AT3g13350/MDC11_14
           [Arabidopsis thaliana] gi|9294541|dbj|BAB02804.1| high
           mobility group protein-like [Arabidopsis thaliana]
           gi|21593357|gb|AAM65306.1| unknown [Arabidopsis
           thaliana] gi|22137084|gb|AAM91387.1| At3g13350/MDC11_14
           [Arabidopsis thaliana] gi|332641816|gb|AEE75337.1| high
           mobility group-box and ARID domain-binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 319

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 19/122 (15%)
 Frame = +3

Query: 42  GCSINGTIDAKCEWGYLISVDLGHEQLHGVMFHVP----------EDTGAVDSQSQRRFR 191
           G  + G ID K + GYL+++ LG ++L GV++H+P          E   A+   SQRR R
Sbjct: 166 GYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQSQQTMETPSAIVQSSQRRHR 225

Query: 192 DPS---------GTXXXXXXXXXXXXXXDKLKPLYGEHGEDMNKKIWLMWNRLSEADKQE 344
             S                          +LKP Y      + KKI  MW+ L+E++KQ 
Sbjct: 226 KKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQV 285

Query: 345 WR 350
           ++
Sbjct: 286 YQ 287