BLASTX nr result
ID: Bupleurum21_contig00012340
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00012340 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004138392.1| PREDICTED: transcription elongation factor A... 81 8e-14 emb|CBI18026.3| unnamed protein product [Vitis vinifera] 78 9e-13 ref|XP_002272768.1| PREDICTED: transcription elongation factor A... 78 9e-13 ref|XP_002528699.1| transcription elongation factor s-II, putati... 77 1e-12 emb|CBI25342.3| unnamed protein product [Vitis vinifera] 76 3e-12 >ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like [Cucumis sativus] Length = 369 Score = 81.3 bits (199), Expect = 8e-14 Identities = 41/74 (55%), Positives = 50/74 (67%) Frame = +2 Query: 35 MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214 ME EL++L + +K A D EE RC+D L+QL+K PV Y +LVSTQVGK Sbjct: 1 MENELVELFEAAKKAADAAA---APSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGK 57 Query: 215 RLRHLTKHPRKKIQ 256 RLRHLTKHP+KKIQ Sbjct: 58 RLRHLTKHPKKKIQ 71 >emb|CBI18026.3| unnamed protein product [Vitis vinifera] Length = 322 Score = 77.8 bits (190), Expect = 9e-13 Identities = 38/74 (51%), Positives = 49/74 (66%) Frame = +2 Query: 35 MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214 ME+EL++L ++ +K G+ PE RC+D LKQL+ PV Y+ L STQVGK Sbjct: 1 MERELVELFESAKKAADAA--ATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGK 58 Query: 215 RLRHLTKHPRKKIQ 256 RLRHLTKHP+ KIQ Sbjct: 59 RLRHLTKHPKGKIQ 72 >ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis vinifera] Length = 367 Score = 77.8 bits (190), Expect = 9e-13 Identities = 38/74 (51%), Positives = 49/74 (66%) Frame = +2 Query: 35 MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214 ME+EL++L ++ +K G+ PE RC+D LKQL+ PV Y+ L STQVGK Sbjct: 1 MERELVELFESAKKAADAA--ATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGK 58 Query: 215 RLRHLTKHPRKKIQ 256 RLRHLTKHP+ KIQ Sbjct: 59 RLRHLTKHPKGKIQ 72 >ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis] gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis] Length = 342 Score = 77.0 bits (188), Expect = 1e-12 Identities = 38/74 (51%), Positives = 52/74 (70%) Frame = +2 Query: 35 MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214 ME+EL++L + +K + G+ PE RC+D LKQL+ P++YD+LVS+QVGK Sbjct: 1 MERELVELFEAAKKAADAA--ASDGVSSNGPEVVRCVDALKQLKIFPISYDILVSSQVGK 58 Query: 215 RLRHLTKHPRKKIQ 256 RLR LTKHPR+KIQ Sbjct: 59 RLRPLTKHPREKIQ 72 >emb|CBI25342.3| unnamed protein product [Vitis vinifera] Length = 302 Score = 76.3 bits (186), Expect = 3e-12 Identities = 42/74 (56%), Positives = 50/74 (67%) Frame = +2 Query: 35 MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214 MEKEL++L + +K N+G EE+RC+D LKQL+ PV Y VLVSTQVGK Sbjct: 1 MEKELLELFEATKKAADAAAV-NSGAPS---EEERCLDALKQLKDFPVTYQVLVSTQVGK 56 Query: 215 RLRHLTKHPRKKIQ 256 RLR LTKHP KKIQ Sbjct: 57 RLRTLTKHPTKKIQ 70