BLASTX nr result

ID: Bupleurum21_contig00012340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012340
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138392.1| PREDICTED: transcription elongation factor A...    81   8e-14
emb|CBI18026.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002272768.1| PREDICTED: transcription elongation factor A...    78   9e-13
ref|XP_002528699.1| transcription elongation factor s-II, putati...    77   1e-12
emb|CBI25342.3| unnamed protein product [Vitis vinifera]               76   3e-12

>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
           [Cucumis sativus]
          Length = 369

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = +2

Query: 35  MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214
           ME EL++L +  +K         A   D   EE RC+D L+QL+K PV Y +LVSTQVGK
Sbjct: 1   MENELVELFEAAKKAADAAA---APSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGK 57

Query: 215 RLRHLTKHPRKKIQ 256
           RLRHLTKHP+KKIQ
Sbjct: 58  RLRHLTKHPKKKIQ 71


>emb|CBI18026.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/74 (51%), Positives = 49/74 (66%)
 Frame = +2

Query: 35  MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214
           ME+EL++L ++ +K          G+    PE  RC+D LKQL+  PV Y+ L STQVGK
Sbjct: 1   MERELVELFESAKKAADAA--ATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGK 58

Query: 215 RLRHLTKHPRKKIQ 256
           RLRHLTKHP+ KIQ
Sbjct: 59  RLRHLTKHPKGKIQ 72


>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
           vinifera]
          Length = 367

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/74 (51%), Positives = 49/74 (66%)
 Frame = +2

Query: 35  MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214
           ME+EL++L ++ +K          G+    PE  RC+D LKQL+  PV Y+ L STQVGK
Sbjct: 1   MERELVELFESAKKAADAA--ATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGK 58

Query: 215 RLRHLTKHPRKKIQ 256
           RLRHLTKHP+ KIQ
Sbjct: 59  RLRHLTKHPKGKIQ 72


>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
           gi|223531871|gb|EEF33688.1| transcription elongation
           factor s-II, putative [Ricinus communis]
          Length = 342

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/74 (51%), Positives = 52/74 (70%)
 Frame = +2

Query: 35  MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214
           ME+EL++L +  +K        + G+    PE  RC+D LKQL+  P++YD+LVS+QVGK
Sbjct: 1   MERELVELFEAAKKAADAA--ASDGVSSNGPEVVRCVDALKQLKIFPISYDILVSSQVGK 58

Query: 215 RLRHLTKHPRKKIQ 256
           RLR LTKHPR+KIQ
Sbjct: 59  RLRPLTKHPREKIQ 72


>emb|CBI25342.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 42/74 (56%), Positives = 50/74 (67%)
 Frame = +2

Query: 35  MEKELIQLIQTVEKXXXXXXXGNAGLEDVSPEEDRCIDVLKQLEKCPVNYDVLVSTQVGK 214
           MEKEL++L +  +K        N+G      EE+RC+D LKQL+  PV Y VLVSTQVGK
Sbjct: 1   MEKELLELFEATKKAADAAAV-NSGAPS---EEERCLDALKQLKDFPVTYQVLVSTQVGK 56

Query: 215 RLRHLTKHPRKKIQ 256
           RLR LTKHP KKIQ
Sbjct: 57  RLRTLTKHPTKKIQ 70


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