BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012336
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   214   1e-53
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   188   8e-46
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...   188   8e-46
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   180   2e-43
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   180   2e-43

>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  214 bits (544), Expect = 1e-53
 Identities = 101/208 (48%), Positives = 143/208 (68%)
 Frame = +1

Query: 1   YLFLFCVEGLSNLLDNAKQCNLIHGCRISPLAPDVTHLLFADDSFMFFNATTEEATQVKG 180
           YLF+ C EG+S L+  A++ N++HG ++   AP V+HLLFADDSF+FF A   E   +K 
Sbjct: 234 YLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFRANENETRALKD 293

Query: 181 ILDVYAAISGQAVNFQKSGIMFSSNIRRDKQAELSNILGVHNDIESSNYLGLPSLVGRSK 360
           ILD YA  S Q +N QKS I FS N+   K+  LSN+L V   I    YLGLPS++GRSK
Sbjct: 294 ILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRSK 353

Query: 361 KRVFGFMKERVMKKIQSWSNKPISRAGKSVLIRNVAQAIPSYTMSCFLLPKTLSQDIERA 540
           K +F ++K+R+  +I   S+K +S+AGK VLI++VAQAIPSY MS FLLP +++ DIE+ 
Sbjct: 354 KSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEKM 413

Query: 541 FNSYWWQSGSALKKGVKWHAWDAMSMPK 624
            NS+WW   +  + G++W +W+ ++M K
Sbjct: 414 LNSFWWGMKNEGRGGIRWMSWERLTMRK 441


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  188 bits (477), Expect = 8e-46
 Identities = 92/208 (44%), Positives = 127/208 (61%)
 Frame = +1

Query: 1    YLFLFCVEGLSNLLDNAKQCNLIHGCRISPLAPDVTHLLFADDSFMFFNATTEEATQVKG 180
            YLFL C +  S LL  A     IHG +I   AP V+HL FADDS +F  A+ +E + V  
Sbjct: 645  YLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVAD 704

Query: 181  ILDVYAAISGQAVNFQKSGIMFSSNIRRDKQAELSNILGVHNDIESSNYLGLPSLVGRSK 360
            I+  Y   SGQ VN  K+ ++FS ++ R++++ + N+LGV        YLGLP+++GRSK
Sbjct: 705  IISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSK 764

Query: 361  KRVFGFMKERVMKKIQSWSNKPISRAGKSVLIRNVAQAIPSYTMSCFLLPKTLSQDIERA 540
            K  F  +KER+ KK+Q W  K +SR GK VLI++VAQAIP+Y MS F LP  L  +I   
Sbjct: 765  KVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSL 824

Query: 541  FNSYWWQSGSALKKGVKWHAWDAMSMPK 624
               +WW S    +K + WH+WD +  PK
Sbjct: 825  LARFWWGSSDTNRK-MHWHSWDTLCYPK 851


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score =  188 bits (477), Expect = 8e-46
 Identities = 92/208 (44%), Positives = 133/208 (63%)
 Frame = +1

Query: 1   YLFLFCVEGLSNLLDNAKQCNLIHGCRISPLAPDVTHLLFADDSFMFFNATTEEATQVKG 180
           YLF+  VEGLS L+        IHG ++   AP V+HLLFAD+ F+F  A   EA ++  
Sbjct: 30  YLFILVVEGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFADNCFLFCRANVVEAQRLLT 89

Query: 181 ILDVYAAISGQAVNFQKSGIMFSSNIRRDKQAELSNILGVHNDIESSNYLGLPSLVGRSK 360
           IL  Y A SGQ +N  KS + FS N+    Q +LS I+GV + + +  YLGLPS++ R K
Sbjct: 90  ILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDLSRIIGVRHVMGTGKYLGLPSMIDRDK 149

Query: 361 KRVFGFMKERVMKKIQSWSNKPISRAGKSVLIRNVAQAIPSYTMSCFLLPKTLSQDIERA 540
             VF F+K+ + K+I  W  + +S+AGK V+I++V Q+IPSY MS +LLP ++  DIE+ 
Sbjct: 150 WSVFSFIKDSIWKRINVWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLLPSSVIDDIEKM 209

Query: 541 FNSYWWQSGSALKKGVKWHAWDAMSMPK 624
            N++WW  G +  +G+KW AW+ M+ PK
Sbjct: 210 VNAFWW-GGRSNNRGIKWMAWEHMACPK 236


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  180 bits (457), Expect = 2e-43
 Identities = 88/208 (42%), Positives = 125/208 (60%)
 Frame = +1

Query: 1    YLFLFCVEGLSNLLDNAKQCNLIHGCRISPLAPDVTHLLFADDSFMFFNATTEEATQVKG 180
            YLFL C EG S LL   ++   +HG RI   AP V+HLLFADDS +   A   EA Q++ 
Sbjct: 871  YLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQT 930

Query: 181  ILDVYAAISGQAVNFQKSGIMFSSNIRRDKQAELSNILGVHNDIESSNYLGLPSLVGRSK 360
            IL +Y   SGQ +N  KS +MFS N    ++  +   L +  +  +  YLGLP  VGRS+
Sbjct: 931  ILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSR 990

Query: 361  KRVFGFMKERVMKKIQSWSNKPISRAGKSVLIRNVAQAIPSYTMSCFLLPKTLSQDIERA 540
             ++F ++KER+ ++IQ W  K +SRAGK +LI+ VAQAIP++ M CF L K L   I + 
Sbjct: 991  TKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKM 1050

Query: 541  FNSYWWQSGSALKKGVKWHAWDAMSMPK 624
               YWW +     K + W +W+ +++PK
Sbjct: 1051 IAKYWWSNQEKDNK-MHWLSWNKLTLPK 1077


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  180 bits (456), Expect = 2e-43
 Identities = 88/208 (42%), Positives = 125/208 (60%)
 Frame = +1

Query: 1    YLFLFCVEGLSNLLDNAKQCNLIHGCRISPLAPDVTHLLFADDSFMFFNATTEEATQVKG 180
            YLFL C EG S LL   ++   +HG RI   AP V+HLLFADDS +   A   EA Q++ 
Sbjct: 898  YLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQT 957

Query: 181  ILDVYAAISGQAVNFQKSGIMFSSNIRRDKQAELSNILGVHNDIESSNYLGLPSLVGRSK 360
            IL +Y   SGQ +N  KS +MFS N    ++  +   L +  +  +  YLGLP  VGRS+
Sbjct: 958  ILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSR 1017

Query: 361  KRVFGFMKERVMKKIQSWSNKPISRAGKSVLIRNVAQAIPSYTMSCFLLPKTLSQDIERA 540
             ++F ++KER+ ++IQ W  K +SRAGK +LI+ VAQAIP++ M CF L K L   I + 
Sbjct: 1018 TKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKM 1077

Query: 541  FNSYWWQSGSALKKGVKWHAWDAMSMPK 624
               YWW +     K + W +W+ +++PK
Sbjct: 1078 IAKYWWSNQEKDNK-MHWLSWNKLTLPK 1104