BLASTX nr result

ID: Bupleurum21_contig00012333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012333
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312436.1| auxin efflux carrier component [Populus tric...   238   2e-71
ref|XP_002314810.1| auxin efflux carrier component [Populus tric...   228   4e-67
gb|AAM54033.1|AF515434_1 PIN1-like auxin transport protein [Popu...   229   1e-66
gb|AAP59843.1| PIN1-like protein [Populus tomentosa]                  228   3e-66
emb|CAN66787.1| hypothetical protein VITISV_013835 [Vitis vinifera]   216   4e-65

>ref|XP_002312436.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222852256|gb|EEE89803.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 649

 Score =  238 bits (606), Expect(2) = 2e-71
 Identities = 129/200 (64%), Positives = 136/200 (68%), Gaps = 7/200 (3%)
 Frame = -3

Query: 790 SRNPTPRGSNFNHNDFYSMMGFPGGRLSNFGPADMYSVPSSRGPTPRPSNFEENCASGGL 611
           SRNPTPRGSNFN +DFYSMMG  GGR SN GPAD+YSV SSRGPTPRPSNFEENCA    
Sbjct: 242 SRNPTPRGSNFNPSDFYSMMGVQGGRHSNLGPADLYSVQSSRGPTPRPSNFEENCAP--- 298

Query: 610 AATTTSPRFGFXXXXXXXXXXXXXXXXXPD-IASXXXXXXXXXXXXXXQLQ------SKG 452
            AT TSPRFGF                    I S               LQ      SK 
Sbjct: 299 MATITSPRFGFYPAQTVPTSYPAPNPELASTITSKTTKNQQQQNHQQQLLQPQPQQNSKV 358

Query: 451 SHDAKELHMFVWSSSASPVSDAGGLHVFGGPDFGASEQSGRSDQGAKEIRMLVADQPQNG 272
           +HDAKELHMFVWSSSASPVS+ GGLHVFGG DFGASEQSGRSDQGAKEIRMLVAD PQNG
Sbjct: 359 NHDAKELHMFVWSSSASPVSEGGGLHVFGGTDFGASEQSGRSDQGAKEIRMLVADHPQNG 418

Query: 271 DTKAIPERGEYNREDFSFGG 212
           D+K IP+ G +  EDFSF G
Sbjct: 419 DSKTIPQAGNFAGEDFSFAG 438



 Score = 58.2 bits (139), Expect(2) = 2e-71
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -1

Query: 129 GDQEEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMP 1
           G+ ++REK+GP GL+KLGSSST ELHPK A GA D G  K MP
Sbjct: 442 GEDDQREKEGPTGLNKLGSSSTAELHPK-AVGAPDSGGSKQMP 483


>ref|XP_002314810.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222863850|gb|EEF00981.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 645

 Score =  228 bits (581), Expect(2) = 4e-67
 Identities = 127/200 (63%), Positives = 134/200 (67%), Gaps = 7/200 (3%)
 Frame = -3

Query: 790 SRNPTPRGSNFNHNDFYSMMGFPGGRLSNFGPADMYSVPSSRGPTPRPSNFEENCASGGL 611
           SRNPTPRGSNFN +DFYSMMG  GGR SN GPAD+YSV SSRGPTPRPSNFEENCA    
Sbjct: 242 SRNPTPRGSNFNPSDFYSMMGVQGGRHSNLGPADLYSVQSSRGPTPRPSNFEENCAP--- 298

Query: 610 AATTTSPRFGFXXXXXXXXXXXXXXXXXPD-IASXXXXXXXXXXXXXXQLQ------SKG 452
            AT TSPRFGF                    I S               LQ      SK 
Sbjct: 299 MATITSPRFGFYPAQTVPTSYPAPNPELASTITSKTTKNQQQQNHQQQLLQPQPQQNSKV 358

Query: 451 SHDAKELHMFVWSSSASPVSDAGGLHVFGGPDFGASEQSGRSDQGAKEIRMLVADQPQNG 272
           +HDAKELHMFVWSSSASPVS+ GGLHVFGG DFGASEQSGRSDQGAKEIRMLVAD PQNG
Sbjct: 359 NHDAKELHMFVWSSSASPVSEGGGLHVFGGTDFGASEQSGRSDQGAKEIRMLVADHPQNG 418

Query: 271 DTKAIPERGEYNREDFSFGG 212
           D+K     G++  EDFSF G
Sbjct: 419 DSK----NGDFAGEDFSFAG 434



 Score = 53.5 bits (127), Expect(2) = 4e-67
 Identities = 27/43 (62%), Positives = 32/43 (74%)
 Frame = -1

Query: 129 GDQEEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMP 1
           GD ++REK+GP GL+KLGSSST EL PK AA A D G  + MP
Sbjct: 438 GDDDQREKEGPTGLNKLGSSSTAELQPK-AAEAPDSGGSRKMP 479


>gb|AAM54033.1|AF515434_1 PIN1-like auxin transport protein [Populus tremula x Populus
           tremuloides]
          Length = 640

 Score =  229 bits (585), Expect(2) = 1e-66
 Identities = 124/196 (63%), Positives = 135/196 (68%), Gaps = 3/196 (1%)
 Frame = -3

Query: 790 SRNPTPRGSNFNHNDFYSMMGFPG--GRLSNFGPADMYSVPSSRGPTPRPSNFEENCASG 617
           SRNPTPRGSNFN +DFYSMMG  G  GR SN GPAD+YSV SSRGPTPRPSNFEENCA  
Sbjct: 242 SRNPTPRGSNFNPSDFYSMMGVQGFPGRHSNLGPADLYSVQSSRGPTPRPSNFEENCAP- 300

Query: 616 GLAATTTSPRFGFXXXXXXXXXXXXXXXXXPDIASXXXXXXXXXXXXXXQLQSKGSHDAK 437
              AT +SPRFGF                     +                 SK +HDAK
Sbjct: 301 --TATLSSPRFGFYPAQTVPTSYPAPNPEFASTVTTKTAKNQQQQ------NSKANHDAK 352

Query: 436 ELHMFVWSSSASPVSDAGGLHVFGGPDFGASEQSGRSDQGAKEIRMLVADQPQNGDTKAI 257
           ELHMFVWSSSASPVS+ GGLHVFGG DFGASEQSGRSDQGAKEIRMLVAD PQNG+TK I
Sbjct: 353 ELHMFVWSSSASPVSEGGGLHVFGGTDFGASEQSGRSDQGAKEIRMLVADHPQNGETKTI 412

Query: 256 PER-GEYNREDFSFGG 212
           P++ G++  EDFSF G
Sbjct: 413 PQQDGDFAGEDFSFAG 428



 Score = 50.4 bits (119), Expect(2) = 1e-66
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -1

Query: 126 DQEEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMP 1
           D ++REK+GP GL+KLGSSST EL PK AA A D G  + MP
Sbjct: 434 DVDQREKEGPTGLNKLGSSSTAELQPK-AAEAPDSGGSRKMP 474


>gb|AAP59843.1| PIN1-like protein [Populus tomentosa]
          Length = 619

 Score =  228 bits (581), Expect(2) = 3e-66
 Identities = 123/196 (62%), Positives = 135/196 (68%), Gaps = 3/196 (1%)
 Frame = -3

Query: 790 SRNPTPRGSNFNHNDFYSMMGFPG--GRLSNFGPADMYSVPSSRGPTPRPSNFEENCASG 617
           SRNPTPRGSNFN +DFYSMMG  G  GR SN GPAD+YSV SSRGPTPRPSNFEENCA  
Sbjct: 242 SRNPTPRGSNFNPSDFYSMMGVQGFPGRHSNLGPADLYSVQSSRGPTPRPSNFEENCAP- 300

Query: 616 GLAATTTSPRFGFXXXXXXXXXXXXXXXXXPDIASXXXXXXXXXXXXXXQLQSKGSHDAK 437
              AT +SPRFGF                     +                 SK +HDAK
Sbjct: 301 --TATLSSPRFGFYPAQTVPTSYPAPNPEFASTVTTKTAKNQQQQ------NSKANHDAK 352

Query: 436 ELHMFVWSSSASPVSDAGGLHVFGGPDFGASEQSGRSDQGAKEIRMLVADQPQNGDTKAI 257
           ELHMFVWSSSASPVS+ GGLHVFGG DFGASEQSGRSDQGAKEIRMLVAD P+NG+TK I
Sbjct: 353 ELHMFVWSSSASPVSEGGGLHVFGGTDFGASEQSGRSDQGAKEIRMLVADHPRNGETKTI 412

Query: 256 PER-GEYNREDFSFGG 212
           P++ G++  EDFSF G
Sbjct: 413 PQQDGDFAGEDFSFAG 428



 Score = 50.4 bits (119), Expect(2) = 3e-66
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -1

Query: 126 DQEEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMP 1
           D ++REK+GP GL+KLGSSST EL PK AA A D G  + MP
Sbjct: 434 DVDQREKEGPTGLNKLGSSSTAELQPK-AAEAPDSGGSRKMP 474


>emb|CAN66787.1| hypothetical protein VITISV_013835 [Vitis vinifera]
          Length = 627

 Score =  216 bits (550), Expect(2) = 4e-65
 Identities = 122/198 (61%), Positives = 136/198 (68%), Gaps = 5/198 (2%)
 Frame = -3

Query: 790 SRNPTPRGSNFNHNDFYSMMGFPG--GRLSNFGPADMYSVPSSRGPTPRPSNFEENCASG 617
           SRNPTPRGSNFN++DFYSMMG PG  GR S    AD+YS+ SSRGPTPRPSNFEENCA G
Sbjct: 242 SRNPTPRGSNFNNSDFYSMMGVPGFPGRPS----ADLYSMQSSRGPTPRPSNFEENCAPG 297

Query: 616 GLAATTTSPRFGFXXXXXXXXXXXXXXXXXPDIASXXXXXXXXXXXXXXQLQSKGSHDAK 437
             A   +SPRFGF                    A+              Q QSK +HDAK
Sbjct: 298 --AQAISSPRFGFYP------------------ANSYPAPNPEISATQPQPQSKANHDAK 337

Query: 436 ELHMFVWSSSASPVSDAGGLHVFGGPDFGASEQSGRSDQGAKEIRMLVAD---QPQNGDT 266
           ELHMFVWSSSASPVS+ GGLHVFGG DFGA+EQSGRSDQGAKEIRMLVAD    PQNG++
Sbjct: 338 ELHMFVWSSSASPVSEGGGLHVFGGTDFGAAEQSGRSDQGAKEIRMLVADHPPHPQNGES 397

Query: 265 KAIPERGEYNREDFSFGG 212
           KAIPE  ++  EDF+F G
Sbjct: 398 KAIPEAEDFGGEDFTFVG 415



 Score = 58.9 bits (141), Expect(2) = 4e-65
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -1

Query: 123 QEEREKDGPHGLSKLGSSSTTELHPKGAAGAHDIGAGKHMP 1
           +EEREK+GP GLSKLGSSST ELHPK   GA + GAGK MP
Sbjct: 422 EEEREKEGPIGLSKLGSSSTAELHPK-MLGAPESGAGKQMP 461


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