BLASTX nr result

ID: Bupleurum21_contig00012320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012320
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269518.2| PREDICTED: survival of motor neuron-related-...   172   3e-41
ref|XP_002328804.1| predicted protein [Populus trichocarpa] gi|1...   167   1e-39
ref|XP_004142808.1| PREDICTED: survival of motor neuron-related-...   161   6e-38
ref|XP_003550056.1| PREDICTED: survival of motor neuron-related-...   157   1e-36
gb|ACU18936.1| unknown [Glycine max]                                  157   1e-36

>ref|XP_002269518.2| PREDICTED: survival of motor neuron-related-splicing factor 30-like
           [Vitis vinifera]
          Length = 301

 Score =  172 bits (435), Expect = 3e-41
 Identities = 89/136 (65%), Positives = 105/136 (77%)
 Frame = +2

Query: 8   MQGDGEEVSIQELASNLSTYKEQLQQVKSLLRDDPGNSEYEDMEKELAEVIALTEELLET 187
           MQG GEE+SI ELASNLSTYK+QLQQV+ LL DDPGNSEY DMEKEL EVI LTEELL T
Sbjct: 1   MQG-GEELSIDELASNLSTYKDQLQQVRKLLVDDPGNSEYVDMEKELEEVIVLTEELLAT 59

Query: 188 AKQNEKSELITGTGVGVSHSSHHAEGASPHYLDSGLMPDQSDRFPVGTKVQAVYSEDGEW 367
           AKQ+E S    GT    S   H + G+S H ++ G   D   +FP+GTKVQAV+SEDGEW
Sbjct: 60  AKQSEISLPAFGTNADASPIQHQSGGSSEHLMEPGNNSDHYGKFPIGTKVQAVWSEDGEW 119

Query: 368 YDATIEALTPNGYFVS 415
           Y+ATI++LTP+GY+VS
Sbjct: 120 YEATIDSLTPDGYYVS 135


>ref|XP_002328804.1| predicted protein [Populus trichocarpa] gi|118483337|gb|ABK93570.1|
           unknown [Populus trichocarpa]
           gi|222839102|gb|EEE77453.1| predicted protein [Populus
           trichocarpa]
          Length = 287

 Score =  167 bits (422), Expect = 1e-39
 Identities = 90/132 (68%), Positives = 101/132 (76%)
 Frame = +2

Query: 20  GEEVSIQELASNLSTYKEQLQQVKSLLRDDPGNSEYEDMEKELAEVIALTEELLETAKQN 199
           GEEVSI+ELASNLSTYKEQL QV+ LL DDPGNSEY DMEKEL EVIALTEELLETAKQN
Sbjct: 3   GEEVSIEELASNLSTYKEQLHQVRQLLVDDPGNSEYVDMEKELIEVIALTEELLETAKQN 62

Query: 200 EKSELITGTGVGVSHSSHHAEGASPHYLDSGLMPDQSDRFPVGTKVQAVYSEDGEWYDAT 379
           E S    GTG            ASP Y +     DQ ++FP+G+KVQAV+SEDGEWYDAT
Sbjct: 63  EISGSHLGTGA----------SASPGYAEP-QEADQHEKFPIGSKVQAVWSEDGEWYDAT 111

Query: 380 IEALTPNGYFVS 415
           +E LTPNGY+V+
Sbjct: 112 VEDLTPNGYYVT 123


>ref|XP_004142808.1| PREDICTED: survival of motor neuron-related-splicing factor 30-like
           isoform 1 [Cucumis sativus]
          Length = 299

 Score =  161 bits (407), Expect = 6e-38
 Identities = 87/138 (63%), Positives = 108/138 (78%), Gaps = 2/138 (1%)
 Frame = +2

Query: 8   MQGDGEEVSIQELASNLSTYKEQLQQVKSLLRDDPGNSEYEDMEKELAEVIALTEELLET 187
           MQG GE+VSI+ELA+NLSTYK+QL QV+ LL DDPGNSEY DMEKEL EVIALTEELL T
Sbjct: 1   MQG-GEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLST 59

Query: 188 AKQNEKSELITGTGV--GVSHSSHHAEGASPHYLDSGLMPDQSDRFPVGTKVQAVYSEDG 361
           AKQNE    ++G+ V  G   +S   + +  + +++G M D  ++FP+GTKVQAV+SEDG
Sbjct: 60  AKQNE----VSGSNVETGDDSASIGFQQSKENEMEAGSMSDYHEKFPIGTKVQAVWSEDG 115

Query: 362 EWYDATIEALTPNGYFVS 415
           EWYDATIEA T NG++VS
Sbjct: 116 EWYDATIEAHTVNGFYVS 133


>ref|XP_003550056.1| PREDICTED: survival of motor neuron-related-splicing factor 30-like
           isoform 1 [Glycine max]
          Length = 298

 Score =  157 bits (396), Expect = 1e-36
 Identities = 87/137 (63%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
 Frame = +2

Query: 8   MQGDG-EEVSIQELASNLSTYKEQLQQVKSLLRDDPGNSEYEDMEKELAEVIALTEELLE 184
           MQG G +EVSI+ELASNLS YK+QL QV+ LL DDP NSEY DME+EL+EVIALTEELL 
Sbjct: 1   MQGQGVDEVSIEELASNLSLYKDQLNQVRELLNDDPANSEYVDMERELSEVIALTEELLA 60

Query: 185 TAKQNEKSELITGTGVGVSHSSHHAEGASPHYLDSGLMPDQSDRFPVGTKVQAVYSEDGE 364
           TAKQNE S          + S H+        LDS    D  ++ PVGTKVQAV+SEDGE
Sbjct: 61  TAKQNEISAPPNNAAASPTLSIHNEN----QLLDSS--SDHQEKLPVGTKVQAVWSEDGE 114

Query: 365 WYDATIEALTPNGYFVS 415
           WYDATIEA TPNGY+VS
Sbjct: 115 WYDATIEAYTPNGYYVS 131


>gb|ACU18936.1| unknown [Glycine max]
          Length = 298

 Score =  157 bits (396), Expect = 1e-36
 Identities = 87/137 (63%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
 Frame = +2

Query: 8   MQGDG-EEVSIQELASNLSTYKEQLQQVKSLLRDDPGNSEYEDMEKELAEVIALTEELLE 184
           MQG G +EVSI+ELASNLS YK+QL QV+ LL DDP NSEY DME+EL+EVIALTEELL 
Sbjct: 1   MQGQGVDEVSIEELASNLSLYKDQLNQVRELLNDDPANSEYVDMERELSEVIALTEELLA 60

Query: 185 TAKQNEKSELITGTGVGVSHSSHHAEGASPHYLDSGLMPDQSDRFPVGTKVQAVYSEDGE 364
           TAKQNE S          + S H+        LDS    D  ++ PVGTKVQAV+SEDGE
Sbjct: 61  TAKQNEISAPPNNAAASPTLSIHNEN----QLLDSS--SDHQEKLPVGTKVQAVWSEDGE 114

Query: 365 WYDATIEALTPNGYFVS 415
           WYDATIEA TPNGY+VS
Sbjct: 115 WYDATIEAYTPNGYYVS 131


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