BLASTX nr result

ID: Bupleurum21_contig00012308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012308
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271355.2| PREDICTED: uncharacterized protein LOC100250...   134   4e-29
emb|CBI23073.3| unnamed protein product [Vitis vinifera]              134   4e-29
ref|XP_002318461.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-21
ref|XP_002521932.1| conserved hypothetical protein [Ricinus comm...   102   1e-19
ref|XP_003522532.1| PREDICTED: uncharacterized protein LOC100803...   100   5e-19

>ref|XP_002271355.2| PREDICTED: uncharacterized protein LOC100250422 [Vitis vinifera]
          Length = 549

 Score =  134 bits (337), Expect = 4e-29
 Identities = 117/348 (33%), Positives = 165/348 (47%), Gaps = 38/348 (10%)
 Frame = +3

Query: 3    GRPRSRKPVEPLQLPASAATKKTR-----------LHLPSNGXXXXXXXXXXXMAHELDD 149
            GRPRSRKPVE +    +++ KKTR           L  P               A +   
Sbjct: 198  GRPRSRKPVE-VHADVNSSHKKTRHCHALPATPATLSSPMLTNTSCSQSQYLGSALDPRH 256

Query: 150  NPSAFLLKNVGKAEDIS--LSLSTQHSNRDLNYMMESKMVTMNMSEQQWHQLMSQS---- 311
                FL K+  KA   +  +S+ +    R L +M + +   M  S+QQW QLM       
Sbjct: 257  QSPVFLYKSDSKASPFTPLVSVPSFKETRSLEWMAKGEAAPMATSDQQWQQLMQTKIGLT 316

Query: 312  --SIYSATNTSNFQHNNYGEAEQLNLLSIPEIG----NSEADKYESYLNPYY-------- 449
              S  S  N++    N   + E +NL S  +      N   D    +LNP          
Sbjct: 317  IESSSSICNSNASVFNQQYQEEPINLNSYTDFSAGADNPGRDSINMFLNPGVISLQKPQT 376

Query: 450  -TSKDFIDAWSNDNNLNK-NESSGAVVNENDSPSSLNLSMAMAVSDSYDSEMCQIQMG-E 620
             T + FIDAWS+    N  N  + + V+ N      +L+++M   +  ++EM + +MG  
Sbjct: 377  ETPRAFIDAWSSAVTENPANTCNKSSVSSNGKLPLSSLTLSMGGDNGIENEMGRTEMGLR 436

Query: 621  CHDAN----QRCQGLSWLSPVSWMSSAPGGPLAEVLRPLSVDVNSIPGCHYAGNSGDAIG 788
              D+     ++ Q  +WL+P SW   APGGPLAEVLRP SV   S P   + GN GD+I 
Sbjct: 437  IVDSGGGGCEKPQLSTWLTPASWAGLAPGGPLAEVLRPSSVAAASNPASPHGGN-GDSIS 495

Query: 789  PLATSASSPTGVLQRTLLPLSDSSVCNSPTVAAISTAAPGIVGFQWLN 932
               T+ASSP+GVLQ+ ++  SDSS  +SPT+ A S A P I  F WLN
Sbjct: 496  LSETAASSPSGVLQKPVVSPSDSSGNSSPTLTA-SPAKPEIT-FPWLN 541


>emb|CBI23073.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  134 bits (337), Expect = 4e-29
 Identities = 117/348 (33%), Positives = 165/348 (47%), Gaps = 38/348 (10%)
 Frame = +3

Query: 3    GRPRSRKPVEPLQLPASAATKKTR-----------LHLPSNGXXXXXXXXXXXMAHELDD 149
            GRPRSRKPVE +    +++ KKTR           L  P               A +   
Sbjct: 225  GRPRSRKPVE-VHADVNSSHKKTRHCHALPATPATLSSPMLTNTSCSQSQYLGSALDPRH 283

Query: 150  NPSAFLLKNVGKAEDIS--LSLSTQHSNRDLNYMMESKMVTMNMSEQQWHQLMSQS---- 311
                FL K+  KA   +  +S+ +    R L +M + +   M  S+QQW QLM       
Sbjct: 284  QSPVFLYKSDSKASPFTPLVSVPSFKETRSLEWMAKGEAAPMATSDQQWQQLMQTKIGLT 343

Query: 312  --SIYSATNTSNFQHNNYGEAEQLNLLSIPEIG----NSEADKYESYLNPYY-------- 449
              S  S  N++    N   + E +NL S  +      N   D    +LNP          
Sbjct: 344  IESSSSICNSNASVFNQQYQEEPINLNSYTDFSAGADNPGRDSINMFLNPGVISLQKPQT 403

Query: 450  -TSKDFIDAWSNDNNLNK-NESSGAVVNENDSPSSLNLSMAMAVSDSYDSEMCQIQMG-E 620
             T + FIDAWS+    N  N  + + V+ N      +L+++M   +  ++EM + +MG  
Sbjct: 404  ETPRAFIDAWSSAVTENPANTCNKSSVSSNGKLPLSSLTLSMGGDNGIENEMGRTEMGLR 463

Query: 621  CHDAN----QRCQGLSWLSPVSWMSSAPGGPLAEVLRPLSVDVNSIPGCHYAGNSGDAIG 788
              D+     ++ Q  +WL+P SW   APGGPLAEVLRP SV   S P   + GN GD+I 
Sbjct: 464  IVDSGGGGCEKPQLSTWLTPASWAGLAPGGPLAEVLRPSSVAAASNPASPHGGN-GDSIS 522

Query: 789  PLATSASSPTGVLQRTLLPLSDSSVCNSPTVAAISTAAPGIVGFQWLN 932
               T+ASSP+GVLQ+ ++  SDSS  +SPT+ A S A P I  F WLN
Sbjct: 523  LSETAASSPSGVLQKPVVSPSDSSGNSSPTLTA-SPAKPEIT-FPWLN 568


>ref|XP_002318461.1| predicted protein [Populus trichocarpa] gi|222859134|gb|EEE96681.1|
            predicted protein [Populus trichocarpa]
          Length = 579

 Score =  108 bits (269), Expect = 3e-21
 Identities = 106/341 (31%), Positives = 155/341 (45%), Gaps = 31/341 (9%)
 Frame = +3

Query: 3    GRPRSRKPVEPLQLPASAATKKTRLHLP-------------------SNGXXXXXXXXXX 125
            GRPRSRK VE   L AS    K   H P                   SN           
Sbjct: 259  GRPRSRKHVE---LNASNNNNKKNRHNPAICPEAPVTVAISKPTINNSNSGSASHDQFFG 315

Query: 126  XMAHELDDNPSAFLLKNVGKAEDISLSL---STQHSNRDLNYMMESKMVTMNMSEQQWHQ 296
             M       P  F+ K   K     ++    ST    R L++M++ +   +  ++QQW  
Sbjct: 316  PMPQPYIQTP-VFVNKTSEKTSTYDVNGAYGSTFKEPRSLDWMLKGEAGPIAKNDQQWPH 374

Query: 297  LMSQS---SIYSATNTSNFQHNNYGEAEQLNLLSIPEIG---NSEADKYESYLNPYYTSK 458
            L+ +    +   + N+++    +Y + E LNL S        + ++++Y  +L+     +
Sbjct: 375  LVHKEIELATEGSFNSASVLKQHY-QGESLNLNSFGNFNAREDQQSNQYSLFLDE--APR 431

Query: 459  DFIDAWSNDNNLNKNESSGAVVNENDSPSSLNLSMAMAVSDSYDSEMCQIQMGEC---HD 629
             FIDAWSND  +++N SS   V+ +       LS++M  + S D EM QIQMG      D
Sbjct: 432  SFIDAWSNDA-ISRNTSS---VSSDGKLHLSPLSLSMGSNRSTDDEMGQIQMGLGLIKSD 487

Query: 630  ANQRCQGLSWLSPVSWMSSAPGGPLAEVLRPLSVDVNSIPGCHYAGNSGDAIGPLATSAS 809
             N+ C   S         SAPGGPLAEVL+  + +            +GD+I P AT+ S
Sbjct: 488  RNEECGNTS---------SAPGGPLAEVLQLRTSNTTGTNQSSSMMENGDSISPPATTVS 538

Query: 810  SPTGVLQRTLLPLSDSSVCNSPTVAAISTAAPGIVGFQWLN 932
            SP+GVLQ+TL   SDSS  +SPT+A+  T     +   WLN
Sbjct: 539  SPSGVLQKTLASFSDSSGNSSPTLASSRTKPE--IAMLWLN 577


>ref|XP_002521932.1| conserved hypothetical protein [Ricinus communis]
            gi|223538857|gb|EEF40456.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 479

 Score =  102 bits (255), Expect = 1e-19
 Identities = 105/334 (31%), Positives = 152/334 (45%), Gaps = 24/334 (7%)
 Frame = +3

Query: 3    GRPRSRKPVEPLQLPASAATKKTRLHLPSNGXXXXXXXXXXXMAHELDDNPS-------- 158
            GRPRSRKPVE   L  +   KK R +  +N            +A++     S        
Sbjct: 178  GRPRSRKPVE--LLANTNNNKKIRYNYVNNHTNSAQSPVAWAVANKNGAADSQFLGSIAQ 235

Query: 159  ------AFLLKNVGKAEDISLSL---STQHSNRDLNYMMESKMVTMNMSEQQWHQLMSQS 311
                   FL K   K  D   S+   S    +R L +MM+ +  ++  ++QQW  +    
Sbjct: 236  PYVQAPVFLDKPSTKVADFDGSMAFASNFKESRSLQWMMKGEAASIATADQQWPGIGL-- 293

Query: 312  SIYSATNTSNFQHNNYGEAEQLNLLSIPEIGNSEADKYESYLNPYYTSKDFIDAWSNDNN 491
                   +S+   N   + E LNL S  +    E  +          S+ FIDAWSN  +
Sbjct: 294  -------SSDCSFNPEYQREALNLNSFGDFSAGEDQRNNQ-------SRGFIDAWSNVAS 339

Query: 492  LNKNESSGAVVNENDSPSSLNLSMAMAVSDSYDSEMCQIQMGECHDANQRCQGLSW---- 659
              ++++SG   N N S +S  L +++ ++ S + EM QIQMG     + +  G S     
Sbjct: 340  DKQSDNSG---NTNSSFTSSGL-LSLGIN-SINDEMSQIQMGLGLVESDQNHGSSIKPLA 394

Query: 660  LSPVSWMSSA---PGGPLAEVLRPLSVDVNSIPGCHYAGNSGDAIGPLATSASSPTGVLQ 830
            L+P +W   A   PGGPLAEVL+  S +            +GD   P AT+ASSP+GVLQ
Sbjct: 395  LAPAAWPEGATVSPGGPLAEVLQLSSGNT--------VVENGDPTSPPATAASSPSGVLQ 446

Query: 831  RTLLPLSDSSVCNSPTVAAISTAAPGIVGFQWLN 932
            RTL   SDSS  +SPT+ + S      +   WLN
Sbjct: 447  RTLASFSDSSANSSPTLGS-SVRDKSEIALMWLN 479


>ref|XP_003522532.1| PREDICTED: uncharacterized protein LOC100803096 [Glycine max]
          Length = 592

 Score =  100 bits (250), Expect = 5e-19
 Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
 Frame = +3

Query: 192  DISLSLSTQHSNRDLNYMMESKMVTMNMSEQQWHQLMSQSSIYSATNTSNFQHNNYGEAE 371
            D   S+S     R L +M+    ++++ S  QW  LM     ++    S+    N  E++
Sbjct: 327  DSVASVSANKEPRGLEWMLNGDPISLDASNSQWQSLM-----HNKVGMSSVSSCNTTESQ 381

Query: 372  QLNLLSIPEIGNSEADK-YESYLNPYYTS---------KDFIDAWSN----DNNLNKNES 509
             LN  ++   G  + ++ +  +LNP             + FIDAWSN     +N N N  
Sbjct: 382  YLNSFALYSSGLEQQNRRHPLFLNPLLVPMKNLQPEKPRGFIDAWSNAETAQSNANTNNK 441

Query: 510  SGAVVNENDSPSSLNLSMAM-AVSDSYDSEMCQIQMGECHDANQRCQGLS---WLSPVSW 677
            + A      S SSL+LSM   AVS+  D+    + + E +        +S   W +P  W
Sbjct: 442  NSAASIGKLSLSSLDLSMGGGAVSEDVDNVNMGLGLMETYGKTHTDTKISLSNWHNPAPW 501

Query: 678  MSSAP--GGPLAEVLRPLSVDVNSIPGCHYAGNS------GDAIGPLATSASSPTGVLQR 833
            ++S+   GGPLAEVLR  +V   +      A +S       ++  PL T  SSP+GVLQ+
Sbjct: 502  VASSSTLGGPLAEVLRSSTVTATTNEATSNATSSPATTTHAESNSPLGTMVSSPSGVLQK 561

Query: 834  TLLPLSDSSVCNSPTVAA 887
            TL+ LSDSS  +SPTVA+
Sbjct: 562  TLISLSDSSNNSSPTVAS 579


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