BLASTX nr result

ID: Bupleurum21_contig00012307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012307
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|ACQ42220.1| R2R3 transcription factor MYB108-like protein 1 [...    65   6e-09
ref|XP_002280500.1| PREDICTED: uncharacterized protein LOC100248...    62   4e-08
emb|CAN63179.1| hypothetical protein VITISV_029107 [Vitis vinifera]    62   4e-08
ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|222865100|gb|EEF02231.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = +1

Query: 121 DYCFPDQLNFTDNVLSNPMGYYNQGSGYQCMEPNTSNSWMDGGDSSDNLLTAEDIWLLSQ 300
           DY   DQ  ++++++S P GY+NQG  +Q ME N++   M+ GD+SDNL   EDIW L Q
Sbjct: 252 DYFQADQGGYSESMIS-PAGYFNQGLDFQAMEHNSNQWLMESGDTSDNLWNPEDIWFLQQ 310

Query: 301 QFNNNV 318
           Q N N+
Sbjct: 311 QMNYNM 316


>gb|ACQ42220.1| R2R3 transcription factor MYB108-like protein 1 [Vitis vinifera]
          Length = 306

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = +1

Query: 121 DYCFPDQLNFTDNVLSNPMGYYNQGSGYQCMEPNTSNSWMDGGD--SSDNLLTAEDIWLL 294
           D+   DQ+ +TD+++S P GY+NQG  +Q MEPNT   W +GGD  ++DNL   EDIW +
Sbjct: 243 DFFQTDQVGYTDSLIS-PSGYFNQGLDFQSMEPNT--QWYEGGDTATADNLWNVEDIWSV 299

Query: 295 SQQFNN 312
             QF N
Sbjct: 300 QTQFTN 305


>ref|XP_002280500.1| PREDICTED: uncharacterized protein LOC100248153 [Vitis vinifera]
           gi|296083206|emb|CBI22842.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = +1

Query: 121 DYCFPDQLNFTDNVLSNPMGYYNQGSGYQCMEPNTSNSWMDGGD--SSDNLLTAEDIWLL 294
           D+    Q+ +TD+++S P GY+NQG  +Q MEPNT   W +GGD  ++DNL   EDIW +
Sbjct: 243 DFFQTGQVGYTDSLIS-PSGYFNQGLDFQSMEPNT--QWYEGGDTATADNLWNVEDIWSV 299

Query: 295 SQQFNN 312
             QF N
Sbjct: 300 QTQFTN 305


>emb|CAN63179.1| hypothetical protein VITISV_029107 [Vitis vinifera]
          Length = 306

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = +1

Query: 121 DYCFPDQLNFTDNVLSNPMGYYNQGSGYQCMEPNTSNSWMDGGD--SSDNLLTAEDIWLL 294
           D+    Q+ +TD+++S P GY+NQG  +Q MEPNT   W +GGD  ++DNL   EDIW +
Sbjct: 243 DFFQTGQVGYTDSLIS-PSGYFNQGLDFQSMEPNT--QWYEGGDTATADNLWNVEDIWSV 299

Query: 295 SQQFNN 312
             QF N
Sbjct: 300 QTQFTN 305


>ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|222851189|gb|EEE88736.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +1

Query: 121 DYCFPDQLNFTDNVLSNPMGYYNQGSGYQCMEPNTSNSW-MDGGDSSDNLLTAEDIWLLS 297
           DY    Q+ ++++++S P G++N G  +Q ME ++SN W MD GD+SDN+   EDIW L 
Sbjct: 258 DYFQAGQVGYSESMISPP-GFFNHGLDFQAME-HSSNQWPMDSGDTSDNMWNLEDIWFLQ 315

Query: 298 QQFNN 312
           QQ NN
Sbjct: 316 QQLNN 320


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