BLASTX nr result
ID: Bupleurum21_contig00012304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012304
(1423 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18185.3| unnamed protein product [Vitis vinifera] 445 e-122
ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l... 445 e-122
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera] 445 e-122
ref|XP_002531128.1| exosome complex exonuclease rrp45, putative ... 414 e-113
gb|ABK95169.1| unknown [Populus trichocarpa] 399 e-109
>emb|CBI18185.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 445 bits (1144), Expect = e-122
Identities = 229/355 (64%), Positives = 280/355 (78%), Gaps = 15/355 (4%)
Frame = +2
Query: 50 DPSFEAGRPGEFAVELGRIIDRGLRESKAVDTESLCVIAGQLVWSIRIDIHILDNGGNLV 229
DPSFEAGRPGE AVELGR+IDRGLRES+AVD ESLCV+AG+LVWSIRID+HI+DNGGNL+
Sbjct: 32 DPSFEAGRPGEAAVELGRVIDRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLI 91
Query: 230 DAANIAALASLSTFRRPECTLGGEDGQQVIVHPPEVREPIPLIIHHLPVAVSFGFIGKEN 409
DAANIAALA+L TFRRPEC+ GGEDGQ++IVHPPEVREP+PLI+HHLP+AV+F IG EN
Sbjct: 92 DAANIAALAALLTFRRPECSFGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGNEN 151
Query: 410 IVVIDPTHYEETVMGGSMTATLNTNGDVCAIQKAGGEGVLPSVIMQCLRIASVKAGDMTS 589
I+VIDPTH EE VMGG MTATLNTNGDVCAIQKAGGEG++ SVIMQCLRIASVKA D+TS
Sbjct: 152 IMVIDPTHSEEAVMGGRMTATLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADITS 211
Query: 590 KIKNAVESFNTERALRKIKRHSSSAVVDVNEPA------------QKGGTKFSTNYMDRL 733
KIKNAVE+FNTERALRKIKRHSSS VDV+ P +K + S+++M+RL
Sbjct: 212 KIKNAVEAFNTERALRKIKRHSSSIAVDVSGPGAKMRENKNQSVDEKVVNELSSHHMERL 271
Query: 734 NLMTEDSKAAQSNDMEVDHQIT-QGISKR-DSDAKSFTGGPSSWDPYSKGVDSDALRASL 907
+ +E+S QS+D+EV Q++ QG + R D + +SF GGPSSWDPYSKG+DSD L+ASL
Sbjct: 272 KMESEESCVTQSSDVEVKTQLSEQGRTNRSDENTRSFIGGPSSWDPYSKGIDSDFLKASL 331
Query: 908 ASHVAVEPTKKLEDSKLDQPS-DMELNQPVPDNNSHVLSNEVTNAGLQTTEEKTL 1069
ASH ++ K +DS+ + + D++ +P D + + + QT EKTL
Sbjct: 332 ASHGLIKQNTKQKDSRGEMKAPDVKSEEPNADIDPALCPMKTVGTTPQTNGEKTL 386
>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
Length = 467
Score = 445 bits (1144), Expect = e-122
Identities = 229/355 (64%), Positives = 280/355 (78%), Gaps = 15/355 (4%)
Frame = +2
Query: 50 DPSFEAGRPGEFAVELGRIIDRGLRESKAVDTESLCVIAGQLVWSIRIDIHILDNGGNLV 229
DPSFEAGRPGE AVELGR+IDRGLRES+AVD ESLCV+AG+LVWSIRID+HI+DNGGNL+
Sbjct: 92 DPSFEAGRPGEAAVELGRVIDRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLI 151
Query: 230 DAANIAALASLSTFRRPECTLGGEDGQQVIVHPPEVREPIPLIIHHLPVAVSFGFIGKEN 409
DAANIAALA+L TFRRPEC+ GGEDGQ++IVHPPEVREP+PLI+HHLP+AV+F IG EN
Sbjct: 152 DAANIAALAALLTFRRPECSFGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGNEN 211
Query: 410 IVVIDPTHYEETVMGGSMTATLNTNGDVCAIQKAGGEGVLPSVIMQCLRIASVKAGDMTS 589
I+VIDPTH EE VMGG MTATLNTNGDVCAIQKAGGEG++ SVIMQCLRIASVKA D+TS
Sbjct: 212 IMVIDPTHSEEAVMGGRMTATLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADITS 271
Query: 590 KIKNAVESFNTERALRKIKRHSSSAVVDVNEPA------------QKGGTKFSTNYMDRL 733
KIKNAVE+FNTERALRKIKRHSSS VDV+ P +K + S+++M+RL
Sbjct: 272 KIKNAVEAFNTERALRKIKRHSSSIAVDVSGPGAKMRENKNQSVDEKVVNELSSHHMERL 331
Query: 734 NLMTEDSKAAQSNDMEVDHQIT-QGISKR-DSDAKSFTGGPSSWDPYSKGVDSDALRASL 907
+ +E+S QS+D+EV Q++ QG + R D + +SF GGPSSWDPYSKG+DSD L+ASL
Sbjct: 332 KMESEESCVTQSSDVEVKTQLSEQGRTNRSDENTRSFIGGPSSWDPYSKGIDSDFLKASL 391
Query: 908 ASHVAVEPTKKLEDSKLDQPS-DMELNQPVPDNNSHVLSNEVTNAGLQTTEEKTL 1069
ASH ++ K +DS+ + + D++ +P D + + + QT EKTL
Sbjct: 392 ASHGLIKQNTKQKDSRGEMKAPDVKSEEPNADIDPALCPMKTVGTTPQTNGEKTL 446
>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
Length = 476
Score = 445 bits (1144), Expect = e-122
Identities = 229/355 (64%), Positives = 280/355 (78%), Gaps = 15/355 (4%)
Frame = +2
Query: 50 DPSFEAGRPGEFAVELGRIIDRGLRESKAVDTESLCVIAGQLVWSIRIDIHILDNGGNLV 229
DPSFEAGRPGE AVELGR+IDRGLRES+AVD ESLCV+AG+LVWSIRID+HI+DNGGNL+
Sbjct: 101 DPSFEAGRPGEAAVELGRVIDRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLI 160
Query: 230 DAANIAALASLSTFRRPECTLGGEDGQQVIVHPPEVREPIPLIIHHLPVAVSFGFIGKEN 409
DAANIAALA+L TFRRPEC+ GGEDGQ++IVHPPEVREP+PLI+HHLP+AV+F IG EN
Sbjct: 161 DAANIAALAALLTFRRPECSFGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGNEN 220
Query: 410 IVVIDPTHYEETVMGGSMTATLNTNGDVCAIQKAGGEGVLPSVIMQCLRIASVKAGDMTS 589
I+VIDPTH EE VMGG MTATLNTNGDVCAIQKAGGEG++ SVIMQCLRIASVKA D+TS
Sbjct: 221 IMVIDPTHSEEAVMGGRMTATLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADITS 280
Query: 590 KIKNAVESFNTERALRKIKRHSSSAVVDVNEPA------------QKGGTKFSTNYMDRL 733
KIKNAVE+FNTERALRKIKRHSSS VDV+ P +K + S+++M+RL
Sbjct: 281 KIKNAVEAFNTERALRKIKRHSSSIAVDVSGPGAKMRENKNQSVDEKVVNELSSHHMERL 340
Query: 734 NLMTEDSKAAQSNDMEVDHQIT-QGISKR-DSDAKSFTGGPSSWDPYSKGVDSDALRASL 907
+ +E+S QS+D+EV Q++ QG + R D + +SF GGPSSWDPYSKG+DSD L+ASL
Sbjct: 341 KMESEESCVTQSSDVEVKTQLSEQGRTNRSDENTRSFIGGPSSWDPYSKGIDSDFLKASL 400
Query: 908 ASHVAVEPTKKLEDSKLDQPS-DMELNQPVPDNNSHVLSNEVTNAGLQTTEEKTL 1069
ASH ++ K +DS+ + + D++ +P D + + + QT EKTL
Sbjct: 401 ASHGLIKQNTKQKDSRGEMKAPDVKSEEPNADIDPALCPMKTVGTTPQTNGEKTL 455
>ref|XP_002531128.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
gi|223529292|gb|EEF31262.1| exosome complex exonuclease
rrp45, putative [Ricinus communis]
Length = 463
Score = 414 bits (1063), Expect = e-113
Identities = 216/354 (61%), Positives = 266/354 (75%), Gaps = 14/354 (3%)
Frame = +2
Query: 50 DPSFEAGRPGEFAVELGRIIDRGLRESKAVDTESLCVIAGQLVWSIRIDIHILDNGGNLV 229
DPSFE GRPGE AVELGRIIDRGLRES+AVDTESLCV+AG+LVW+IRID+HILDNGGNLV
Sbjct: 92 DPSFEPGRPGESAVELGRIIDRGLRESRAVDTESLCVLAGKLVWAIRIDLHILDNGGNLV 151
Query: 230 DAANIAALASLSTFRRPECTLGGEDGQQVIVHPPEVREPIPLIIHHLPVAVSFGFIGKEN 409
DAANIAALA+L TFRRPECTLGGEDGQQVIVHPPEV+EP+PLI+HHLP+AV+F F E+
Sbjct: 152 DAANIAALAALLTFRRPECTLGGEDGQQVIVHPPEVKEPLPLIVHHLPIAVTFAFFSSEH 211
Query: 410 IVVIDPTHYEETVMGGSMTATLNTNGDVCAIQKAGGEGVLPSVIMQCLRIASVKAGDMTS 589
+V+DPTH EE VM G MT T+N NGD+C+IQKAGGEGV+ S IM CLR+AS A +T
Sbjct: 212 TMVVDPTHNEEAVMTGRMTVTVNANGDICSIQKAGGEGVMQSRIMHCLRVASRNAESITK 271
Query: 590 KIKNAVESFNTERALRKIKRHSSSAVVDV----------NEP-AQKGGTKFSTNYMDRLN 736
KIK+AVE++NTERALRKIKRHS+S V+V N+P QKG ++ S + M+RL
Sbjct: 272 KIKDAVEAYNTERALRKIKRHSTSVAVNVSTAIDVRELENKPFIQKGISEISRHQMERLK 331
Query: 737 LMTEDSKAAQSNDMEVDHQITQ--GISKRDSDAKSFTGGPSSWDPYSKGVDSDALRASLA 910
L +E+S +QSN ++ + ++ G S R+ +A +F GGPS WDPYSKGVDSD L+ASLA
Sbjct: 332 LTSEESSVSQSNGIDSGLRSSEQGGTSNREGNATNFLGGPSRWDPYSKGVDSDFLKASLA 391
Query: 911 SHVAVEPTKKLEDSKLDQPSDMELNQPVPDNNSHVLS-NEVTNAGLQTTEEKTL 1069
SH P K + +Q S +++ P+ S E G+QT+ EKTL
Sbjct: 392 SHGVSAPNK---EKGGEQKSTQAVDEKAPETAKPATSVGETFETGIQTSGEKTL 442
>gb|ABK95169.1| unknown [Populus trichocarpa]
Length = 403
Score = 399 bits (1026), Expect = e-109
Identities = 204/353 (57%), Positives = 265/353 (75%), Gaps = 13/353 (3%)
Frame = +2
Query: 50 DPSFEAGRPGEFAVELGRIIDRGLRESKAVDTESLCVIAGQLVWSIRIDIHILDNGGNLV 229
DPSFE GRPGE AVELGRI+DRGLRES+AVDTESLCV++G+LVW+IRID+HILDNGGNLV
Sbjct: 32 DPSFEPGRPGESAVELGRIVDRGLRESRAVDTESLCVLSGKLVWAIRIDLHILDNGGNLV 91
Query: 230 DAANIAALASLSTFRRPECTLGGEDGQQVIVHPPEVREPIPLIIHHLPVAVSFGFIGKEN 409
DAANIAALA+L TFRRPECTLGG+DGQ+V VHPPE REP+PLI+HHLP+A++F F+G E
Sbjct: 92 DAANIAALAALLTFRRPECTLGGDDGQEVTVHPPEEREPLPLIVHHLPIAITFAFLGSEG 151
Query: 410 IVVIDPTHYEETVMGGSMTATLNTNGDVCAIQKAGGEGVLPSVIMQCLRIASVKAGDMTS 589
+V+DPTH EE VMGG MT T+N GD+C+IQKAGGEGV SVIM CL++AS+ A +T
Sbjct: 152 KMVVDPTHSEEAVMGGRMTVTVNAIGDICSIQKAGGEGVPQSVIMHCLQLASMSAESITK 211
Query: 590 KIKNAVESFNTERALRKIKRHSSSAV-------VDVNEP----AQKGGTKFSTNYMDRLN 736
KI NAVE+++TERALRKIKRH +SA DV E Q GG++ S ++M+RL
Sbjct: 212 KINNAVEAYSTERALRKIKRHPTSAAGNVSVAGSDVKEQNKTVEQVGGSELSRHHMERLR 271
Query: 737 LMTEDSKAAQSNDMEVDHQITQ--GISKRDSDAKSFTGGPSSWDPYSKGVDSDALRASLA 910
L++E++ +++SND + D + ++ G S +S+A SF GGPSSWDPY KGVD D+L+ ++A
Sbjct: 272 LVSEETCSSRSNDNDGDIKSSEQGGTSGGESNAVSFLGGPSSWDPYLKGVDDDSLKPNVA 331
Query: 911 SHVAVEPTKKLEDSKLDQPSDMELNQPVPDNNSHVLSNEVTNAGLQTTEEKTL 1069
S + ++SK + P M+ +P D L+ + + L+T EKTL
Sbjct: 332 SRGISTQHMEQKESKENSPK-MDTEKPTEDIKQATLATDTSGTALETNGEKTL 383