BLASTX nr result
ID: Bupleurum21_contig00012287
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012287
(1816 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38567.3| unnamed protein product [Vitis vinifera] 777 0.0
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos... 777 0.0
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos... 771 0.0
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6... 755 0.0
ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|2... 723 0.0
>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
Length = 1027
Score = 777 bits (2006), Expect = 0.0
Identities = 397/564 (70%), Positives = 466/564 (82%)
Frame = +3
Query: 3 VENAVGKLFNAFIVNDHKDNLVLRACAREANYNHLQIIIYDFSRPRLNIPDHMLPQINHP 182
VE A+GK+ NAFIV DHKD+L+LR CAREANYNHLQIIIYDFSRPRLNIP HMLPQ HP
Sbjct: 465 VEIAIGKMLNAFIVTDHKDSLLLRGCAREANYNHLQIIIYDFSRPRLNIPYHMLPQTQHP 524
Query: 183 TTISVLHSENATVTNVLVDVGHAERQVLVSDYNMGKSVAFDRNIRNLKEVYTLEGYKMFS 362
T IS LHS+N TV NVLVD+G+AERQVLV DY +GK+VAFD+ I NLKEVYT +GY+MFS
Sbjct: 525 TLISALHSDNPTVMNVLVDMGNAERQVLVRDYEVGKTVAFDQRIPNLKEVYTSDGYRMFS 584
Query: 363 RRSAQTTLPPNRNVRAGRLCSSYDDQIKSLERDALNXXXXXXXXXGKKRYLEEARSNLRD 542
R S QT LPPN+ R GRLCSS+D QIK LER AL+ KKR EE +L+D
Sbjct: 585 RGSVQTILPPNKKARTGRLCSSFDSQIKDLERYALDIQEHGQEVKRKKRNAEEELQDLQD 644
Query: 543 KFQLAKRRRTDAEGILRSRKFALQDAEKSYALESSSKPTSNVDELYQEISLVKNEIQERE 722
K Q KRRR +AE + S+K LQD + SY ES+ P S+VDEL+ EIS V+ EI+E+E
Sbjct: 645 KLQSIKRRRLNAERDVMSKKLRLQDVKNSYVAESNPAPASSVDELHHEISKVQAEIREKE 704
Query: 723 ILLQKCQVRSDEAKMKANELKTSFESLCESAKAEIQAFEKAEKEMMQIEEDLHSAKAERN 902
ILL+ Q+R +A KAN+LK SFE+LCESAK EI A+E AE E++ IE++L SA+ E+
Sbjct: 705 ILLEDFQLRMSKADAKANDLKLSFENLCESAKVEIDAYEAAENELVVIEQELCSAETEKT 764
Query: 903 RYEVAKDERVIPKIKEAEARKEDLVNNRKVNHKKASVICPESEIEALGGHDGSTPEQLSA 1082
YE + +V+P IKEAE + ++L +NRK + +KAS+ICPESEIEALGG STPEQLSA
Sbjct: 765 HYEGIMNNKVLPDIKEAETQYQELEHNRKESCRKASIICPESEIEALGGCK-STPEQLSA 823
Query: 1083 QLTRLNQRLQHESQKFPESIDDLRMMHEKKERKILRKQQTYKMFRQKLHACQKSLELRCS 1262
QL RLNQRLQ ESQ++ E I+DLRM+++KKER+ILRKQQTY+ FR+KL+AC+++L+LR S
Sbjct: 824 QLNRLNQRLQSESQRYAEPIEDLRMIYDKKERRILRKQQTYEAFREKLNACKEALDLRWS 883
Query: 1263 KFQRNATLLKRQLTWQFNGHLRKKGISGHITISYEDETLSIEVKMPQDASNNSVRDTRGL 1442
KFQRNATLLKRQLTWQFN HLRKKGISGHI +SYE++TLS+EVKMPQDASNN VRDTRGL
Sbjct: 884 KFQRNATLLKRQLTWQFNAHLRKKGISGHIKVSYEEKTLSVEVKMPQDASNNIVRDTRGL 943
Query: 1443 SGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFI 1622
SGGERSFSTLCFALALHEMTE+PFRAMDEFDVFMDAVSRKISLDTLV+FALAQGSQWIFI
Sbjct: 944 SGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVNFALAQGSQWIFI 1003
Query: 1623 TPHDISMVKQDERIKKQQMAAPRS 1694
TPHDISMVKQ ERIKKQQMAAPRS
Sbjct: 1004 TPHDISMVKQGERIKKQQMAAPRS 1027
>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
[Vitis vinifera]
Length = 1057
Score = 777 bits (2006), Expect = 0.0
Identities = 397/564 (70%), Positives = 466/564 (82%)
Frame = +3
Query: 3 VENAVGKLFNAFIVNDHKDNLVLRACAREANYNHLQIIIYDFSRPRLNIPDHMLPQINHP 182
VE A+GK+ NAFIV DHKD+L+LR CAREANYNHLQIIIYDFSRPRLNIP HMLPQ HP
Sbjct: 495 VEIAIGKMLNAFIVTDHKDSLLLRGCAREANYNHLQIIIYDFSRPRLNIPYHMLPQTQHP 554
Query: 183 TTISVLHSENATVTNVLVDVGHAERQVLVSDYNMGKSVAFDRNIRNLKEVYTLEGYKMFS 362
T IS LHS+N TV NVLVD+G+AERQVLV DY +GK+VAFD+ I NLKEVYT +GY+MFS
Sbjct: 555 TLISALHSDNPTVMNVLVDMGNAERQVLVRDYEVGKTVAFDQRIPNLKEVYTSDGYRMFS 614
Query: 363 RRSAQTTLPPNRNVRAGRLCSSYDDQIKSLERDALNXXXXXXXXXGKKRYLEEARSNLRD 542
R S QT LPPN+ R GRLCSS+D QIK LER AL+ KKR EE +L+D
Sbjct: 615 RGSVQTILPPNKKARTGRLCSSFDSQIKDLERYALDIQEHGQEVKRKKRNAEEELQDLQD 674
Query: 543 KFQLAKRRRTDAEGILRSRKFALQDAEKSYALESSSKPTSNVDELYQEISLVKNEIQERE 722
K Q KRRR +AE + S+K LQD + SY ES+ P S+VDEL+ EIS V+ EI+E+E
Sbjct: 675 KLQSIKRRRLNAERDVMSKKLRLQDVKNSYVAESNPAPASSVDELHHEISKVQAEIREKE 734
Query: 723 ILLQKCQVRSDEAKMKANELKTSFESLCESAKAEIQAFEKAEKEMMQIEEDLHSAKAERN 902
ILL+ Q+R +A KAN+LK SFE+LCESAK EI A+E AE E++ IE++L SA+ E+
Sbjct: 735 ILLEDFQLRMSKADAKANDLKLSFENLCESAKVEIDAYEAAENELVVIEQELCSAETEKT 794
Query: 903 RYEVAKDERVIPKIKEAEARKEDLVNNRKVNHKKASVICPESEIEALGGHDGSTPEQLSA 1082
YE + +V+P IKEAE + ++L +NRK + +KAS+ICPESEIEALGG STPEQLSA
Sbjct: 795 HYEGIMNNKVLPDIKEAETQYQELEHNRKESCRKASIICPESEIEALGGCK-STPEQLSA 853
Query: 1083 QLTRLNQRLQHESQKFPESIDDLRMMHEKKERKILRKQQTYKMFRQKLHACQKSLELRCS 1262
QL RLNQRLQ ESQ++ E I+DLRM+++KKER+ILRKQQTY+ FR+KL+AC+++L+LR S
Sbjct: 854 QLNRLNQRLQSESQRYAEPIEDLRMIYDKKERRILRKQQTYEAFREKLNACKEALDLRWS 913
Query: 1263 KFQRNATLLKRQLTWQFNGHLRKKGISGHITISYEDETLSIEVKMPQDASNNSVRDTRGL 1442
KFQRNATLLKRQLTWQFN HLRKKGISGHI +SYE++TLS+EVKMPQDASNN VRDTRGL
Sbjct: 914 KFQRNATLLKRQLTWQFNAHLRKKGISGHIKVSYEEKTLSVEVKMPQDASNNIVRDTRGL 973
Query: 1443 SGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFI 1622
SGGERSFSTLCFALALHEMTE+PFRAMDEFDVFMDAVSRKISLDTLV+FALAQGSQWIFI
Sbjct: 974 SGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVNFALAQGSQWIFI 1033
Query: 1623 TPHDISMVKQDERIKKQQMAAPRS 1694
TPHDISMVKQ ERIKKQQMAAPRS
Sbjct: 1034 TPHDISMVKQGERIKKQQMAAPRS 1057
>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
[Cucumis sativus]
Length = 1052
Score = 771 bits (1992), Expect = 0.0
Identities = 391/564 (69%), Positives = 463/564 (82%)
Frame = +3
Query: 3 VENAVGKLFNAFIVNDHKDNLVLRACAREANYNHLQIIIYDFSRPRLNIPDHMLPQINHP 182
VE A+G+L NAFIV DH+D+L+LR CA EANY L I+IYDFSRP LNIP HMLPQ HP
Sbjct: 489 VEIAIGRLLNAFIVTDHQDSLLLRRCANEANYRQLPIVIYDFSRPVLNIPAHMLPQTKHP 548
Query: 183 TTISVLHSENATVTNVLVDVGHAERQVLVSDYNMGKSVAFDRNIRNLKEVYTLEGYKMFS 362
TT+SV+HSEN TV NVL+D G AERQVLV DYN+GKSVAFD+ I NLKEV+TL+GYKMFS
Sbjct: 549 TTLSVIHSENHTVINVLIDKGDAERQVLVKDYNVGKSVAFDQRISNLKEVFTLDGYKMFS 608
Query: 363 RRSAQTTLPPNRNVRAGRLCSSYDDQIKSLERDALNXXXXXXXXXGKKRYLEEARSNLRD 542
R S QT LPP R R+GRLCSS+DDQIKSLE+DALN +KR EE +L D
Sbjct: 609 RGSVQTILPPVRKPRSGRLCSSFDDQIKSLEKDALNVKQEAEQCRKRKRVSEEQLRDLED 668
Query: 543 KFQLAKRRRTDAEGILRSRKFALQDAEKSYALESSSKPTSNVDELYQEISLVKNEIQERE 722
AKRR AE L S+ LQD KS E+SS P+SNVDEL+QEIS ++ EIQE +
Sbjct: 669 NLNNAKRRCRSAERFLMSKNLELQDLRKSQVAETSSVPSSNVDELHQEISKIEEEIQENK 728
Query: 723 ILLQKCQVRSDEAKMKANELKTSFESLCESAKAEIQAFEKAEKEMMQIEEDLHSAKAERN 902
+LL+K +VR EA+ KA +LK SFE+LCESAK EI AFE+ E++M+Q+E LHSA+ E++
Sbjct: 729 MLLEKFRVRMKEAEAKAKDLKVSFENLCESAKGEIDAFEEVERDMLQLERKLHSAEKEKD 788
Query: 903 RYEVAKDERVIPKIKEAEARKEDLVNNRKVNHKKASVICPESEIEALGGHDGSTPEQLSA 1082
YE +V+ IKEAE + ++L +RK ++ KAS+ICPESEIEALG DGSTPEQLSA
Sbjct: 789 HYEGIMTNKVLFDIKEAERQHQELERHRKESYSKASIICPESEIEALGDWDGSTPEQLSA 848
Query: 1083 QLTRLNQRLQHESQKFPESIDDLRMMHEKKERKILRKQQTYKMFRQKLHACQKSLELRCS 1262
QLTRLNQRL +E+++ ES++DLRMM+EKKER I+RK+QTYK FR+KL ACQK+L+LR +
Sbjct: 849 QLTRLNQRLNNETRRCSESLEDLRMMYEKKERTIIRKRQTYKSFREKLDACQKALQLRWN 908
Query: 1263 KFQRNATLLKRQLTWQFNGHLRKKGISGHITISYEDETLSIEVKMPQDASNNSVRDTRGL 1442
KF+RNA+LLKRQLTWQFNGHLRKKGISG+I ++YE++TLS+EVKMPQDAS++SVRDTRGL
Sbjct: 909 KFERNASLLKRQLTWQFNGHLRKKGISGNIKVNYEEKTLSVEVKMPQDASSSSVRDTRGL 968
Query: 1443 SGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFI 1622
SGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFI
Sbjct: 969 SGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFI 1028
Query: 1623 TPHDISMVKQDERIKKQQMAAPRS 1694
TPHDI +VKQ ERIKKQQMAAPRS
Sbjct: 1029 TPHDIGVVKQGERIKKQQMAAPRS 1052
>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
communis] gi|223550086|gb|EEF51573.1| structural
maintenance of chromosomes 6 smc6, putative [Ricinus
communis]
Length = 1058
Score = 755 bits (1950), Expect = 0.0
Identities = 386/564 (68%), Positives = 461/564 (81%)
Frame = +3
Query: 3 VENAVGKLFNAFIVNDHKDNLVLRACAREANYNHLQIIIYDFSRPRLNIPDHMLPQINHP 182
VENA+GKL NAFIV +H D+L+LR AREA YN+LQIIIYDFSRPRL IP HMLPQ + P
Sbjct: 495 VENAIGKLLNAFIVTNHSDSLLLRGYAREARYNNLQIIIYDFSRPRLIIPSHMLPQTSSP 554
Query: 183 TTISVLHSENATVTNVLVDVGHAERQVLVSDYNMGKSVAFDRNIRNLKEVYTLEGYKMFS 362
TT+SVL SEN TV NVLVD+G AERQVLV DY++GK+VAFDR I+NLKEVYTL+GYKMFS
Sbjct: 555 TTLSVLRSENDTVLNVLVDMGSAERQVLVEDYDVGKAVAFDRKIQNLKEVYTLDGYKMFS 614
Query: 363 RRSAQTTLPPNRNVRAGRLCSSYDDQIKSLERDALNXXXXXXXXXGKKRYLEEARSNLRD 542
R S QT LPPN+ R GRLCSSYDDQIK LE+DA + +KR E NL+
Sbjct: 615 RGSVQTVLPPNKKARTGRLCSSYDDQIKDLEQDASHVRKKAEESRKRKRDSEANLQNLQR 674
Query: 543 KFQLAKRRRTDAEGILRSRKFALQDAEKSYALESSSKPTSNVDELYQEISLVKNEIQERE 722
+ AK R +AE L S+ A++D +KSYA ESS P +NVDEL++EIS ++ +IQE+E
Sbjct: 675 DLKNAKERCLNAERELVSKNLAVRDLKKSYATESSLVPATNVDELHEEISKIQGQIQEKE 734
Query: 723 ILLQKCQVRSDEAKMKANELKTSFESLCESAKAEIQAFEKAEKEMMQIEEDLHSAKAERN 902
L+ Q + A+ KA+ELK +FE LCESAK E+ A+E+AE E+M+IE+DL SA+ E+
Sbjct: 735 ASLEMLQNSRNVAEEKASELKLAFEKLCESAKEELDAYEEAEGELMKIEKDLQSAETEKA 794
Query: 903 RYEVAKDERVIPKIKEAEARKEDLVNNRKVNHKKASVICPESEIEALGGHDGSTPEQLSA 1082
YE +V+P I+ AEA ++L NRK + +KAS+ICPES+IEALGG D STPEQLSA
Sbjct: 795 HYEGVMTNKVLPDIEAAEAHYQELEENRKESCRKASIICPESDIEALGGRDRSTPEQLSA 854
Query: 1083 QLTRLNQRLQHESQKFPESIDDLRMMHEKKERKILRKQQTYKMFRQKLHACQKSLELRCS 1262
QL RLNQRLQHESQ++ +SIDDLRM++EKK+RKIL+KQQ YK FR+KL AC+++L+LR +
Sbjct: 855 QLNRLNQRLQHESQRYSDSIDDLRMLYEKKQRKILKKQQMYKGFREKLEACKRALDLRWN 914
Query: 1263 KFQRNATLLKRQLTWQFNGHLRKKGISGHITISYEDETLSIEVKMPQDASNNSVRDTRGL 1442
KFQRN+TLLKRQLTW FNGHL KKGISG+I +SYE++TL +EVKMPQDAS+++VRDTRGL
Sbjct: 915 KFQRNSTLLKRQLTWNFNGHLGKKGISGNIKVSYEEKTLRVEVKMPQDASSSTVRDTRGL 974
Query: 1443 SGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFI 1622
SGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFI
Sbjct: 975 SGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFI 1034
Query: 1623 TPHDISMVKQDERIKKQQMAAPRS 1694
TPHDISMVKQ ERIKKQQMAAPRS
Sbjct: 1035 TPHDISMVKQGERIKKQQMAAPRS 1058
>ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|222840926|gb|EEE78473.1|
predicted protein [Populus trichocarpa]
Length = 1046
Score = 723 bits (1865), Expect = 0.0
Identities = 373/565 (66%), Positives = 449/565 (79%), Gaps = 1/565 (0%)
Frame = +3
Query: 3 VENAVGKLFNAFIVNDHKDNLVLRACAREANYNHLQIIIYDFSRPRLNIPDHMLPQINHP 182
VENAVGKL NAFIV DH+D+L+LR CAREANYN+LQIIIYDFSRPRL IP HMLPQ NHP
Sbjct: 482 VENAVGKLLNAFIVTDHRDSLLLRGCAREANYNNLQIIIYDFSRPRLTIPSHMLPQTNHP 541
Query: 183 TTISVLHSENATVTNVLVDVGHAERQVLVSDYNMGKSVAFDRNIRNLKEVYTLEGYKMFS 362
TT SV+ S+N T+ NVLVD+G AERQVLV DY+ GK+VAF++ I NLKEVYT++GYKMFS
Sbjct: 542 TTFSVIRSDNDTILNVLVDMGSAERQVLVEDYDAGKAVAFEKQISNLKEVYTIDGYKMFS 601
Query: 363 RRSAQTTLPPNRNVRAGRLCSSYDDQIKSLERDALNXXXXXXXXXGKKRYLEEARSNLRD 542
R S QT LPPN+ +RAGRLC S+DDQI++L++ N +KR E + +L+
Sbjct: 602 RGSVQTVLPPNKKLRAGRLCGSFDDQIRNLDQSKSNVQKEADQCRKRKRDSEASLQHLQH 661
Query: 543 KFQLAKRRRTDAEGILRSRKFALQDAEKSYALESSSKPT-SNVDELYQEISLVKNEIQER 719
++ K + +AE L S+K LQDA+ SYA +SS+ S VDEL QEIS ++ EIQE+
Sbjct: 662 GLKIMKEKCRNAERDLVSKKLGLQDAKNSYASATSSQAAASTVDELQQEISSIQEEIQEK 721
Query: 720 EILLQKCQVRSDEAKMKANELKTSFESLCESAKAEIQAFEKAEKEMMQIEEDLHSAKAER 899
++ L+ QVR +EA KA +L+ +FE L ES K EI A EKAE E+++IE+DL A+AE+
Sbjct: 722 KMQLESLQVRINEADSKARDLELTFEDLRESVKEEINAIEKAESELVKIEKDLQFAEAEK 781
Query: 900 NRYEVAKDERVIPKIKEAEARKEDLVNNRKVNHKKASVICPESEIEALGGHDGSTPEQLS 1079
RYE RV+P I+ AEA+ +L NRK + +KAS+ICPESEIEALGG DGSTPEQLS
Sbjct: 782 ARYEGVMTTRVLPDIEMAEAQYRELEENRKESCRKASIICPESEIEALGGCDGSTPEQLS 841
Query: 1080 AQLTRLNQRLQHESQKFPESIDDLRMMHEKKERKILRKQQTYKMFRQKLHACQKSLELRC 1259
L +LNQRLQ+E Q+ +SIDDLRM ++KKERKILRK+QTY+ FR+KL C+++L LR
Sbjct: 842 VHLNKLNQRLQNECQQHSDSIDDLRMFYQKKERKILRKRQTYRAFREKLKTCEEALNLRW 901
Query: 1260 SKFQRNATLLKRQLTWQFNGHLRKKGISGHITISYEDETLSIEVKMPQDASNNSVRDTRG 1439
SKFQRNA+ LKRQLTW FNGHL +KGISG I ISYE++TL +EVKMPQDAS +SVRDTRG
Sbjct: 902 SKFQRNASDLKRQLTWNFNGHLGEKGISGSIKISYEEKTLKVEVKMPQDASCSSVRDTRG 961
Query: 1440 LSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIF 1619
LSGGERSFSTLCFALALH+MTEA FRAMDEFDVFMDAVSRKISLDTLV FALAQGSQWIF
Sbjct: 962 LSGGERSFSTLCFALALHQMTEASFRAMDEFDVFMDAVSRKISLDTLVKFALAQGSQWIF 1021
Query: 1620 ITPHDISMVKQDERIKKQQMAAPRS 1694
ITPHDIS VK ERIKKQQ+AAPRS
Sbjct: 1022 ITPHDISGVKHHERIKKQQLAAPRS 1046