BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012284
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]             137   7e-31
gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]      137   7e-31
emb|CBI19489.3| unnamed protein product [Vitis vinifera]              137   9e-31
ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [...   137   9e-31
ref|XP_002518733.1| polyadenylate-binding protein, putative [Ric...   136   2e-30

>gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
          Length = 652

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/87 (73%), Positives = 75/87 (86%)
 Frame = -2

Query: 263 VARFLPKQERDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISK 84
           V  FL KQER++T  +T+FNN+YVKNLS  TTE+DLKKIFG+FG ITS  VMRD DG SK
Sbjct: 200 VGPFLRKQERESTADKTRFNNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSK 259

Query: 83  CFGFVNFDNPDDASKAVEALNGKKFDD 3
           CFGFVNFD+PDDA+++VEALNGKKFDD
Sbjct: 260 CFGFVNFDDPDDAARSVEALNGKKFDD 286



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/77 (45%), Positives = 52/77 (67%)
 Frame = -2

Query: 245 KQERDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVN 66
           +Q    T  + +  N+YVKNL  + +++ LK++F +FGTITS  VMRD +GIS+  GFV 
Sbjct: 309 EQSLKETADKFEGLNLYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVA 368

Query: 65  FDNPDDASKAVEALNGK 15
           F   ++ASKA+  +NGK
Sbjct: 369 FSTAEEASKALTEMNGK 385



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/78 (38%), Positives = 43/78 (55%)
 Frame = -2

Query: 236 RDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVNFDN 57
           RD T+ ++   NI++KNL  +   + L   F  FG I S  V  D  G S+ +GFV FDN
Sbjct: 118 RDPTIRKSGAGNIFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQSRGYGFVQFDN 177

Query: 56  PDDASKAVEALNGKKFDD 3
            + A  A++ LNG   +D
Sbjct: 178 EESAKSAIDKLNGMLLND 195


>gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
          Length = 658

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/87 (73%), Positives = 78/87 (89%)
 Frame = -2

Query: 263 VARFLPKQERDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISK 84
           V  FL KQ+RD+ +S+TKFNNIYVKNLS +T+E+DL+K FG++GTITS VVMRD DG SK
Sbjct: 200 VGVFLRKQDRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSK 259

Query: 83  CFGFVNFDNPDDASKAVEALNGKKFDD 3
           CFGFVNF+NP+DA+KAV+ALNGKKFDD
Sbjct: 260 CFGFVNFENPEDAAKAVDALNGKKFDD 286



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/63 (52%), Positives = 45/63 (71%)
 Frame = -2

Query: 203 NIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVNFDNPDDASKAVEAL 24
           N+YVKNL     +E LK++F ++GTITS  VMRD  GIS+  GFV F  P++AS+A+  +
Sbjct: 323 NLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEM 382

Query: 23  NGK 15
           NGK
Sbjct: 383 NGK 385



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/78 (37%), Positives = 44/78 (56%)
 Frame = -2

Query: 236 RDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVNFDN 57
           RD T  ++   NI++KNL  +   + L + F  FGTI S  +  D  G SK +GFV +D+
Sbjct: 118 RDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISCKIATDASGQSKGYGFVQYDS 177

Query: 56  PDDASKAVEALNGKKFDD 3
            + A  A++ LNG   +D
Sbjct: 178 EEAAQTAIDKLNGMLMND 195


>emb|CBI19489.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/87 (74%), Positives = 76/87 (87%)
 Frame = -2

Query: 263 VARFLPKQERDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISK 84
           V +FL KQER+  L++TKFNN+YVKNLS +TTEEDLK IFG+FG ITS VVMRD DG SK
Sbjct: 178 VGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSK 237

Query: 83  CFGFVNFDNPDDASKAVEALNGKKFDD 3
           CFGFVNF+N DDA++AVEALNGKKFD+
Sbjct: 238 CFGFVNFENADDAAEAVEALNGKKFDE 264



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = -2

Query: 203 NIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVNFDNPDDASKAVEAL 24
           N+Y+KNL  +  ++ LK++F +FGTITS  VMRD  GIS+  GFV F   ++AS+A+  +
Sbjct: 301 NLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEM 360

Query: 23  NGK 15
           NGK
Sbjct: 361 NGK 363



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/78 (37%), Positives = 43/78 (55%)
 Frame = -2

Query: 236 RDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVNFDN 57
           RD ++ ++   NI++KNL  +   + L   F  FG I S  +  D  G SK +GFV FDN
Sbjct: 96  RDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDN 155

Query: 56  PDDASKAVEALNGKKFDD 3
            + A  A++ LNG   +D
Sbjct: 156 EESAQNAIDKLNGMLIND 173


>ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|147773643|emb|CAN76464.1| hypothetical protein
           VITISV_017035 [Vitis vinifera]
          Length = 640

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/87 (74%), Positives = 76/87 (87%)
 Frame = -2

Query: 263 VARFLPKQERDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISK 84
           V +FL KQER+  L++TKFNN+YVKNLS +TTEEDLK IFG+FG ITS VVMRD DG SK
Sbjct: 178 VGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSK 237

Query: 83  CFGFVNFDNPDDASKAVEALNGKKFDD 3
           CFGFVNF+N DDA++AVEALNGKKFD+
Sbjct: 238 CFGFVNFENADDAAEAVEALNGKKFDE 264



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = -2

Query: 203 NIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVNFDNPDDASKAVEAL 24
           N+Y+KNL  +  ++ LK++F +FGTITS  VMRD  GIS+  GFV F   ++AS+A+  +
Sbjct: 301 NLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEM 360

Query: 23  NGK 15
           NGK
Sbjct: 361 NGK 363



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/78 (37%), Positives = 43/78 (55%)
 Frame = -2

Query: 236 RDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVNFDN 57
           RD ++ ++   NI++KNL  +   + L   F  FG I S  +  D  G SK +GFV FDN
Sbjct: 96  RDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDN 155

Query: 56  PDDASKAVEALNGKKFDD 3
            + A  A++ LNG   +D
Sbjct: 156 EESAQNAIDKLNGMLIND 173


>ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223542114|gb|EEF43658.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 644

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/87 (73%), Positives = 75/87 (86%)
 Frame = -2

Query: 263 VARFLPKQERDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISK 84
           V  FL KQER++ + +T+FNN+YVKNLS  TTEEDLKK FG++GTITSAVVMRD DG +K
Sbjct: 184 VGPFLRKQERESAIDKTRFNNVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGKTK 243

Query: 83  CFGFVNFDNPDDASKAVEALNGKKFDD 3
           CFGFVNF+N DDA+ AVEALNGKKFDD
Sbjct: 244 CFGFVNFENADDAATAVEALNGKKFDD 270



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/63 (52%), Positives = 46/63 (73%)
 Frame = -2

Query: 203 NIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVNFDNPDDASKAVEAL 24
           N+Y+KNL  +  ++ LK++F  FGTITS  VMRD +GIS+  GFV F  P++ASKA+  +
Sbjct: 307 NLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEM 366

Query: 23  NGK 15
           NGK
Sbjct: 367 NGK 369



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/78 (41%), Positives = 43/78 (55%)
 Frame = -2

Query: 236 RDATLSRTKFNNIYVKNLSAATTEEDLKKIFGDFGTITSAVVMRDEDGISKCFGFVNFDN 57
           RD ++ ++   NI++KNL      + L   F  FG I S  V  D  G SK +GFV FDN
Sbjct: 102 RDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDSSGQSKGYGFVQFDN 161

Query: 56  PDDASKAVEALNGKKFDD 3
            + A KA+E LNG   +D
Sbjct: 162 EESAQKAIEKLNGMLLND 179