BLASTX nr result

ID: Bupleurum21_contig00012281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012281
         (1679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276596.2| PREDICTED: uncharacterized protein LOC100242...   319   2e-88
emb|CAN65740.1| hypothetical protein VITISV_037757 [Vitis vinifera]   315   4e-87
ref|XP_002273252.2| PREDICTED: uncharacterized protein LOC100253...   327   6e-87
ref|XP_002512575.1| nucleic acid binding protein, putative [Rici...   319   1e-84
ref|XP_003554600.1| PREDICTED: uncharacterized protein LOC100794...   295   3e-77

>ref|XP_002276596.2| PREDICTED: uncharacterized protein LOC100242533 [Vitis vinifera]
          Length = 638

 Score =  319 bits (817), Expect(2) = 2e-88
 Identities = 164/325 (50%), Positives = 221/325 (68%), Gaps = 7/325 (2%)
 Frame = -2

Query: 1402 PVRPGDFSIPPTSALSTSDLFPPNHNTG-------RRDGEGFDSAPILNLPDINKLNISE 1244
            P+RP   + P       S+ FPPN +T        R DG GF + P  N+PD+  LNISE
Sbjct: 315  PLRP---NFPSQPTFGPSNSFPPNPHTPASHIMPPRPDGPGFTNGPP-NVPDVGVLNISE 370

Query: 1243 DPSRDYNPXXXXXXXXXXXXXXSILESPNQLNTNSPVKRHMAHKSSLYVNDTQNNRYPSG 1064
             PS  +NP              +I ESPN  + +   K H+ H +  + +D QNNRY  G
Sbjct: 371  YPSNVHNPPSFQQRDGELKRNSNI-ESPNPGSLSGQQKGHILHDTPSFYHDPQNNRYSRG 429

Query: 1063 APEYLHLPSSAIVTANISNNGVCGTPGSPRPLEHIQGLIGVILLALNTLKSEKMMPTEAN 884
             PE+    SSA+ T N+ +NG+ G+ G  +P E++QGLIGVILLALNTLK+EK++PTEAN
Sbjct: 430  -PEFPPSSSSAMGTTNVPSNGIWGSHGCQKPSEYVQGLIGVILLALNTLKNEKILPTEAN 488

Query: 883  IRDCIHYGDLRHPNTDVRKAIDSAIEQKLVVKQNFGALQLYIGTNEKLWKCVNPISANPR 704
            I DCI YGD +H NTDV+KA++SAIEQ++V+KQ  G +QLY+G N++LWKCVN +  NP+
Sbjct: 489  IADCIRYGDPKHQNTDVKKALESAIEQQMVIKQKLGTVQLYVGKNDRLWKCVNLMGGNPK 548

Query: 703  SYPQSTWDELQNFLKSSAGRSDLMASRCRYEAATIIKNLCLKEYSLGDIHQIMYMAINIK 524
             Y ++TWD +QNFL S AGRS +MAS+C+YEAA I+KN+CLK+ +LGD+ QI+ M I+ K
Sbjct: 549  QYSKATWDGIQNFLISPAGRSAIMASQCKYEAAIILKNMCLKDRALGDVLQILNMVISAK 608

Query: 523  KWIIHHQSGWQPISITLA*TNLDLG 449
            KWI H QSGWQP++I+L  +N D G
Sbjct: 609  KWITHLQSGWQPVNISLPESNTDSG 633



 Score = 35.4 bits (80), Expect(2) = 2e-88
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = -1

Query: 1679 NSTNSHQLGYLHSKQVPQVLSGVYNSKVSVGLATPNRFPDNSNSSWINTANPKRSYQDRH 1500
            N  N +Q     +   PQ LSG YN   S+    PN F  + + S  N  N + +YQ+ +
Sbjct: 253  NRRNLNQPNIPRTASAPQQLSGAYNPNASLNGHAPNFFSGSPDPSRSNGHNLQSNYQNHY 312

Query: 1499 S 1497
            S
Sbjct: 313  S 313


>emb|CAN65740.1| hypothetical protein VITISV_037757 [Vitis vinifera]
          Length = 399

 Score =  315 bits (806), Expect(2) = 4e-87
 Identities = 162/325 (49%), Positives = 220/325 (67%), Gaps = 7/325 (2%)
 Frame = -2

Query: 1402 PVRPGDFSIPPTSALSTSDLFPPNHNTG-------RRDGEGFDSAPILNLPDINKLNISE 1244
            P+RP   + P       S+ FPPN +T        R DG  F + P  N+PD+  LNISE
Sbjct: 76   PLRP---NFPSQPTFGPSNSFPPNPHTPASHIMPPRPDGPVFTNGPP-NVPDVGVLNISE 131

Query: 1243 DPSRDYNPXXXXXXXXXXXXXXSILESPNQLNTNSPVKRHMAHKSSLYVNDTQNNRYPSG 1064
             PS  +NP              +I ESPN  + +   K H+ H +  + +D QNNRY  G
Sbjct: 132  YPSNVHNPPSFQQRDGELKRNSNI-ESPNPGSLSGQQKGHILHDTPSFYHDPQNNRYSRG 190

Query: 1063 APEYLHLPSSAIVTANISNNGVCGTPGSPRPLEHIQGLIGVILLALNTLKSEKMMPTEAN 884
             PE+    SSA+ T N+ +NG+ G+ G  +P E++QGLIGVILLALNTLK+E+++PTEAN
Sbjct: 191  -PEFPPSSSSAMGTTNVPSNGIWGSHGCQKPSEYVQGLIGVILLALNTLKNERILPTEAN 249

Query: 883  IRDCIHYGDLRHPNTDVRKAIDSAIEQKLVVKQNFGALQLYIGTNEKLWKCVNPISANPR 704
            I DCI YGD +H NTDV+KA++SAIEQ++V+KQ  G +QLY+G N++LWKCVN +  NP+
Sbjct: 250  IADCIRYGDPKHQNTDVKKALESAIEQQMVIKQKLGTVQLYVGKNDRLWKCVNLMGGNPK 309

Query: 703  SYPQSTWDELQNFLKSSAGRSDLMASRCRYEAATIIKNLCLKEYSLGDIHQIMYMAINIK 524
             Y ++TWD +QNFL S AGRS +MAS+C+YEAA I+KN+CLK+ +LGD+ QI+ M I+ K
Sbjct: 310  QYSKATWDGIQNFLISPAGRSAIMASQCKYEAAIILKNMCLKDLALGDVLQILNMVISAK 369

Query: 523  KWIIHHQSGWQPISITLA*TNLDLG 449
            KWI H QSGWQP++I+L  +N D G
Sbjct: 370  KWITHLQSGWQPVNISLPESNTDSG 394



 Score = 35.4 bits (80), Expect(2) = 4e-87
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = -1

Query: 1679 NSTNSHQLGYLHSKQVPQVLSGVYNSKVSVGLATPNRFPDNSNSSWINTANPKRSYQDRH 1500
            N  N +Q     +   PQ LSG YN   S+    PN F  + + S  N  N + +YQ+ +
Sbjct: 14   NRRNLNQPNIPRTASAPQQLSGAYNPNASLNGHAPNFFSGSPDPSRSNGHNLQSNYQNHY 73

Query: 1499 S 1497
            S
Sbjct: 74   S 74


>ref|XP_002273252.2| PREDICTED: uncharacterized protein LOC100253767 [Vitis vinifera]
          Length = 640

 Score =  327 bits (838), Expect = 6e-87
 Identities = 165/324 (50%), Positives = 225/324 (69%), Gaps = 7/324 (2%)
 Frame = -2

Query: 1402 PVRPGDFSIPPTSALSTSDLFPPNHNTG-------RRDGEGFDSAPILNLPDINKLNISE 1244
            P+RP +  IP  ++ ++++L+PPN  +        R +G  F SAP  N+PDI++L++SE
Sbjct: 315  PLRPNN--IPTQASFASNNLYPPNSYSHGFRPMPPRSEGPRFPSAPPANVPDISRLSMSE 372

Query: 1243 DPSRDYNPXXXXXXXXXXXXXXSILESPNQLNTNSPVKRHMAHKSSLYVNDTQNNRYPSG 1064
             P+   NP              S  ESP+    N P K ++ H S L   DT +NRYP G
Sbjct: 373  YPNYAQNPPNFHQRIGGEYKPYSS-ESPHPPGLNVPQKGYLPHTSQLLYQDTSSNRYPGG 431

Query: 1063 APEYLHLPSSAIVTANISNNGVCGTPGSPRPLEHIQGLIGVILLALNTLKSEKMMPTEAN 884
             P+     SS +   ++S+NGV G+ G P+P E++QGLIGVILL LNTLK+EK+MPTE N
Sbjct: 432  -PDLPAHSSSPVGANSVSSNGVWGSQGCPQPSEYVQGLIGVILLTLNTLKTEKIMPTEVN 490

Query: 883  IRDCIHYGDLRHPNTDVRKAIDSAIEQKLVVKQNFGALQLYIGTNEKLWKCVNPISANPR 704
            I DCI +GD +H NTDVRKA++SA+EQ++VVKQN GA+QLY+G  E+LWKCVNPI  NP 
Sbjct: 491  ISDCIRHGDPKHQNTDVRKALESAVEQQMVVKQNLGAVQLYVGKKERLWKCVNPIGGNPN 550

Query: 703  SYPQSTWDELQNFLKSSAGRSDLMASRCRYEAATIIKNLCLKEYSLGDIHQIMYMAINIK 524
             YP++TWD +Q FL +S GRS +MAS+C+YEAA I++N CL+E++LGD+ QI+ M   +K
Sbjct: 551  QYPKATWDRIQMFLATSIGRSAIMASQCKYEAALILRNKCLEEFALGDVLQILNMLSTMK 610

Query: 523  KWIIHHQSGWQPISITLA*TNLDL 452
            KWI++HQSGWQPI ITLA TN D+
Sbjct: 611  KWIVNHQSGWQPIKITLAETNTDI 634


>ref|XP_002512575.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223548536|gb|EEF50027.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 703

 Score =  319 bits (818), Expect = 1e-84
 Identities = 166/324 (51%), Positives = 219/324 (67%), Gaps = 6/324 (1%)
 Frame = -2

Query: 1402 PVRPGDFSIPPTSALSTSDLFPPNHNTG------RRDGEGFDSAPILNLPDINKLNISED 1241
            P+RP   ++ P  A    +++PPN          R +G  F S P  N+PDI  L+IS  
Sbjct: 379  PLRPNASAMQPDFA--AGNMYPPNFQIHAPLMPPRPNGTTFTSEPPTNVPDIGNLHISGY 436

Query: 1240 PSRDYNPXXXXXXXXXXXXXXSILESPNQLNTNSPVKRHMAHKSSLYVNDTQNNRYPSGA 1061
            P+  +NP                 ++P  +N N+    +    +    ++T NNRYP G+
Sbjct: 437  PTSFHNPPNAQRRNGEQKHDAK-RKAPKSVNLNNSQNGYTTQNNPSGYHETVNNRYPGGS 495

Query: 1060 PEYLHLPSSAIVTANISNNGVCGTPGSPRPLEHIQGLIGVILLALNTLKSEKMMPTEANI 881
             EY    SSA  T     N + G PG P+P E++QGLIGVILLALNTLKSEK+MPTEANI
Sbjct: 496  -EYPPSSSSATATEVAPVNVIWGMPGCPKPSEYVQGLIGVILLALNTLKSEKIMPTEANI 554

Query: 880  RDCIHYGDLRHPNTDVRKAIDSAIEQKLVVKQNFGALQLYIGTNEKLWKCVNPISANPRS 701
             DCI YGD +H NTD++KA++SAIEQ++V+KQN GA+QLY+G NEKLW+CVNPI  + + 
Sbjct: 555  ADCIRYGDPKHRNTDIKKALESAIEQQMVMKQNLGAVQLYVGKNEKLWRCVNPIGGSLKE 614

Query: 700  YPQSTWDELQNFLKSSAGRSDLMASRCRYEAATIIKNLCLKEYSLGDIHQIMYMAINIKK 521
            YP++TWDE+Q FL SSAGRS +M+S+CRYEAATIIK++CLKE +LG+I QI+ M I +KK
Sbjct: 615  YPKATWDEIQKFLASSAGRSAIMSSQCRYEAATIIKSMCLKELALGNILQILNMVIALKK 674

Query: 520  WIIHHQSGWQPISITLA*TNLDLG 449
            WIIHHQSGWQP++ITLA  N +LG
Sbjct: 675  WIIHHQSGWQPLTITLAEANCNLG 698


>ref|XP_003554600.1| PREDICTED: uncharacterized protein LOC100794608 [Glycine max]
          Length = 632

 Score =  295 bits (754), Expect = 3e-77
 Identities = 152/321 (47%), Positives = 204/321 (63%), Gaps = 7/321 (2%)
 Frame = -2

Query: 1402 PVRPGDFSIPPTSALSTSDLFPPNHNT-------GRRDGEGFDSAPILNLPDINKLNISE 1244
            P+RP +F + P  A S S  + PN +T        R  G  F S P  N+PDI  LNIS 
Sbjct: 310  PLRPNNFPLQPPFAPSNS--YTPNSHTFPTSMVPPRTGGPNFTSGPHTNVPDIGNLNISG 367

Query: 1243 DPSRDYNPXXXXXXXXXXXXXXSILESPNQLNTNSPVKRHMAHKSSLYVNDTQNNRYPSG 1064
             P+  +NP              +   +P+ L +      HM H S       Q+++    
Sbjct: 368  YPNSVHNPPTVPQRSGELKQNSNN-NAPHHLRSIDEKNGHMVHNSGT----KQSHQGYQH 422

Query: 1063 APEYLHLPSSAIVTANISNNGVCGTPGSPRPLEHIQGLIGVILLALNTLKSEKMMPTEAN 884
             PEY   P +A+   N S NG+ G+PG P+P E++QGLIGV+LLALN+LK+ KMMPTEAN
Sbjct: 423  GPEYQPPPLAAMGNNNPSGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEAN 482

Query: 883  IRDCIHYGDLRHPNTDVRKAIDSAIEQKLVVKQNFGALQLYIGTNEKLWKCVNPISANPR 704
            I DCI YGD +H NTDV+KA++SAIEQ +VVKQN GAL LY+G N+KLWKCVNP+   P+
Sbjct: 483  ITDCIRYGDPKHRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGTPK 542

Query: 703  SYPQSTWDELQNFLKSSAGRSDLMASRCRYEAATIIKNLCLKEYSLGDIHQIMYMAINIK 524
             + + TWDE++ FL + AGRS LM ++C+YEA  +IK++C K+ +LGD+ QI+ M I  K
Sbjct: 543  QHSKETWDEIEKFLTTPAGRSALMGTQCKYEAGIVIKSMCFKDLALGDVLQILNMLITHK 602

Query: 523  KWIIHHQSGWQPISITLA*TN 461
            KW+ HH SGWQP++ITL  TN
Sbjct: 603  KWVTHHPSGWQPLNITLPETN 623


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