BLASTX nr result

ID: Bupleurum21_contig00012279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012279
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303179.1| chromatin remodeling complex subunit [Populu...   211   2e-52
emb|CBI30029.3| unnamed protein product [Vitis vinifera]              206   4e-51
ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...   199   7e-49
ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795...   198   1e-48
ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...   190   4e-46

>ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840611|gb|EEE78158.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1682

 Score =  211 bits (536), Expect = 2e-52
 Identities = 122/290 (42%), Positives = 175/290 (60%), Gaps = 8/290 (2%)
 Frame = -1

Query: 854  GGYFRGIYRHPSHCCERFRELFHRYILSSTE--IQNDKLNNAGSGKALLKVTEDNVRMLL 681
            GG++RG YRHP HCCERFREL HRY+LSS E  I N+K++N  SGKALLKVTEDN+RMLL
Sbjct: 1310 GGFYRGRYRHPVHCCERFRELIHRYVLSSPEYPINNEKMSNMVSGKALLKVTEDNIRMLL 1369

Query: 680  GAASELADNEPLIQKHFFALLSSVWRVSS-TRYLKNSNPTFQSSYPGGR----SLNHLFK 516
              A+E  D+E L+QKHF ALLS+VWRV+S     +N + +  + Y  GR    S+N L  
Sbjct: 1370 NVAAEQPDHELLLQKHFTALLSAVWRVNSRAERQQNLSSSRNALYNHGRVFNSSVNQLPS 1429

Query: 515  TNTVQTSSKMNFANLGTSRKLVAAALRDADATSVHTGASNLNSRDEDSAVADQLVVSLEL 336
             ++ +++ +M F NLG S KL+A AL DA +       S  N  +   A+ +QL ++LE 
Sbjct: 1430 NSSKESAKRMKFTNLGHSSKLLADALHDASSRRPDDRVSYSNLSEVAPAIGEQLEITLEF 1489

Query: 335  PNGANNDMDQLPSVVNVLISGPEPSSSACMS-AGGKMIKSSIVVAENRFRASFRTSDEDC 159
                ++ + Q P ++++ I    P +S     A    +++S  +AENRFR + R   E  
Sbjct: 1490 QKEEDDSLIQFPPIISLSIPSSAPLTSVNKDRAEAHHLRASTSIAENRFRDAARACVEGD 1549

Query: 158  SAPTXXXXXXLDVESKMPVKSQSLGKHKMPILELVKSAKSKVRKTVAESS 9
                       D + ++P K+QSLGKHK+ + E  K  +SK++KT+ E S
Sbjct: 1550 LGWVSSSAPANDFKLRLPSKTQSLGKHKLSVSESTKPPRSKMKKTLIEHS 1599


>emb|CBI30029.3| unnamed protein product [Vitis vinifera]
          Length = 1695

 Score =  206 bits (525), Expect = 4e-51
 Identities = 124/290 (42%), Positives = 175/290 (60%), Gaps = 8/290 (2%)
 Frame = -1

Query: 854  GGYFRGIYRHPSHCCERFRELFHRYILSSTEI-QNDKLNNAGSGKALLKVTEDNVRMLLG 678
            GG++RG YRHP HCCERFREL  RY+LS+ E   N+K++N GSGKALLKVTEDN+RMLL 
Sbjct: 1326 GGFYRGRYRHPVHCCERFRELVQRYVLSAPENPNNEKVSNTGSGKALLKVTEDNIRMLLD 1385

Query: 677  AASELADNEPLIQKHFFALLSSVWRVSS-TRYLKNSNPTFQSSYPGGR----SLNHLFKT 513
             A +L D+E L+QKHF ALL+SVWR++S   + +N  P     Y  GR    ++N +   
Sbjct: 1386 VAIDLPDSELLLQKHFTALLTSVWRMTSRVHHRQNHLPYRNGQYSTGRFFSSTVNQISWN 1445

Query: 512  NTVQTSSKMNFANLG-TSRKLVAAALRDADATSVHTGASNLNSRDEDSAVADQLVVSLEL 336
            +  + + + N+ N G +S +LVAAAL DA+       A   N R+E S V +QL + LE+
Sbjct: 1446 SVREPTERTNWNNFGYSSSRLVAAALHDANNKQHDDSAFLSNRREEVSTVPEQLEIRLEI 1505

Query: 335  PNGANNDMDQLPSVVNVLISGPEPSSSACMS-AGGKMIKSSIVVAENRFRASFRTSDEDC 159
                 + M  LPSV+N+ I G EP S+        +++KSS  +AENRFRA+ R   +  
Sbjct: 1506 ERDFCDSMIPLPSVINLSILGSEPPSAVNNPIEESQILKSSQDMAENRFRAASRACFDGT 1565

Query: 158  SAPTXXXXXXLDVESKMPVKSQSLGKHKMPILELVKSAKSKVRKTVAESS 9
                       D++ +  +KS SLGKHK+   + ++ +KSK +K   E S
Sbjct: 1566 LDWASSAFPTSDIKPRSAIKSHSLGKHKICTSDSIRPSKSKFKKVAVEPS 1615


>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score =  199 bits (506), Expect = 7e-49
 Identities = 119/287 (41%), Positives = 163/287 (56%), Gaps = 5/287 (1%)
 Frame = -1

Query: 854  GGYFRGIYRHPSHCCERFRELFHRYILSSTEIQN-DKLNNAGSGKALLKVTEDNVRMLLG 678
            GG +RG YRHP HCCERF ELF +Y+L S +  N +K+N+ GSGKALLKVTEDN+RMLL 
Sbjct: 1671 GGSYRGRYRHPVHCCERFGELFQKYVLLSLDNANHEKINSPGSGKALLKVTEDNIRMLLD 1730

Query: 677  AASELADNEPLIQKHFFALLSSVWRVSS-TRYLKNSNPTFQSSYPGGR---SLNHLFKTN 510
             ASE  + E L+QKHFFALLSSVW+V+S     +N  PT    Y       S+    + +
Sbjct: 1731 VASEQVNRELLLQKHFFALLSSVWKVASHVDRRRNPLPTCNGLYFDQSFYTSIGQPSQNS 1790

Query: 509  TVQTSSKMNFANLGTSRKLVAAALRDADATSVHTGASNLNSRDEDSAVADQLVVSLELPN 330
              ++S +M F NL  S+KLVAAAL D     V+      N  ++    ADQL ++LE   
Sbjct: 1791 LKKSSKRMTFTNLAQSKKLVAAALDDITTRQVNDKVILSNQGEDMPVSADQLDITLEFTK 1850

Query: 329  GANNDMDQLPSVVNVLISGPEPSSSACMSAGGKMIKSSIVVAENRFRASFRTSDEDCSAP 150
              ++ +   PSV+N+ I G EP+ S     G   +K  + +AENRFR + R  +ED S  
Sbjct: 1851 EDSDVLSSFPSVINLSIIGTEPTPSLNKQTGEDDLKVGLFIAENRFREAARVCEEDSSGW 1910

Query: 149  TXXXXXXLDVESKMPVKSQSLGKHKMPILELVKSAKSKVRKTVAESS 9
                    D  S+   + QS GK K  + +  K ++SK +K   + S
Sbjct: 1911 ASSAFPTNDARSRAGSRIQSSGKQKSSMSDSSKPSRSKSKKASMDPS 1957


>ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795613 [Glycine max]
          Length = 2057

 Score =  198 bits (503), Expect = 1e-48
 Identities = 118/287 (41%), Positives = 164/287 (57%), Gaps = 5/287 (1%)
 Frame = -1

Query: 854  GGYFRGIYRHPSHCCERFRELFHRYILSSTEIQN-DKLNNAGSGKALLKVTEDNVRMLLG 678
            GG +RG YRHP  CCERFRELF +Y+L S +  N +K+N+ GSGKALLKVTEDN+RMLL 
Sbjct: 1687 GGSYRGRYRHPVQCCERFRELFQKYVLLSMDNANHEKINSPGSGKALLKVTEDNIRMLLD 1746

Query: 677  AASELADNEPLIQKHFFALLSSVWRVSS-TRYLKNSNPTFQSSYPGGR---SLNHLFKTN 510
             ASE  + E L+QKHFFALLSSVW+V+S   + +N +P+    Y       S+    + +
Sbjct: 1747 VASEQVNRELLLQKHFFALLSSVWKVASHVDHRRNPSPSCNGLYFDQSFYTSIGQPSQNS 1806

Query: 509  TVQTSSKMNFANLGTSRKLVAAALRDADATSVHTGASNLNSRDEDSAVADQLVVSLELPN 330
              ++S +M FANL  S+ LVAAAL D     V+      N  ++    ADQL ++LE   
Sbjct: 1807 LKKSSERMAFANLAPSKNLVAAALDDITTRQVNDKVILSNQGEDMPVSADQLDITLEFAK 1866

Query: 329  GANNDMDQLPSVVNVLISGPEPSSSACMSAGGKMIKSSIVVAENRFRASFRTSDEDCSAP 150
              ++ +   PSV+N+ I G EP+ S     G   +K  + +AENRFR + R   ED S  
Sbjct: 1867 EDSDVLSSFPSVINLSIHGTEPTPSLNKLTGEDDLKVGLFIAENRFREAARVCGEDSSGW 1926

Query: 149  TXXXXXXLDVESKMPVKSQSLGKHKMPILELVKSAKSKVRKTVAESS 9
                    D  S+   + QS GK K  + +  K ++SK +K   + S
Sbjct: 1927 ASSAFPTNDTRSRPGSRLQSSGKRKSSVSDSSKPSRSKSKKASMDRS 1973


>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
            Helicase, putative [Ricinus communis]
          Length = 2029

 Score =  190 bits (482), Expect = 4e-46
 Identities = 116/287 (40%), Positives = 167/287 (58%), Gaps = 9/287 (3%)
 Frame = -1

Query: 854  GGYFRGIYRHPSHCCERFRELFHRYILSSTEIQ-NDKLNNAGSGKALLKVTEDNVRMLLG 678
            GG++RG YRHP HCCERFREL  RY+LS+ E   N+K  N GSGKALLKVTEDN++ LL 
Sbjct: 1654 GGFYRGRYRHPVHCCERFRELIQRYVLSTPENPINEKACNTGSGKALLKVTEDNIQKLLN 1713

Query: 677  AASELADNEPLIQKHFFALLSSVWRVSSTRYLKNSNPTFQSS----YPGGR---SLNHLF 519
             A+E  D+E L+QKHF ALLSSVWR++S     +  P F SS    Y GGR   S N + 
Sbjct: 1714 FATEQPDHELLLQKHFTALLSSVWRMTSR---TDRQPHFSSSRNGLYFGGRLFSSFNQIS 1770

Query: 518  KTNTVQTSSKMNFANLGTSRKLVAAALRDADATSVHTGASNLNSRDEDSAVADQLVVSLE 339
              +  + + +M   NL  S +L+A+AL +A++  +    S LN  +   + ++QL ++LE
Sbjct: 1771 LNSMKEPAKRMRITNLSESSRLLASALHEANSRPMDDTVSILNRMENVPSTSEQLEITLE 1830

Query: 338  LPNGANNDMDQLPSVVNVLISGPEPSSSACMSAGGK-MIKSSIVVAENRFRASFRTSDED 162
                  + +  LP V+N+ I   +         G +  IK+S+ VAE+RFR + R  DE 
Sbjct: 1831 FEKEETDSLVPLPPVINLSIPLSDSQRFITKDVGEENRIKASMNVAESRFRDAARACDEG 1890

Query: 161  CSAPTXXXXXXLDVESKMPVKSQSLGKHKMPILELVKSAKSKVRKTV 21
                        D++ +   K QSLGKHK  + + VK  +SK+++T+
Sbjct: 1891 GLGWASSAFPANDIKLRPGPKPQSLGKHKPSLPDTVKPPRSKLKRTL 1937


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