BLASTX nr result

ID: Bupleurum21_contig00012277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012277
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
ref|XP_003623493.1| Sex determination protein tasselseed-2 [Medi...   154   9e-36
ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002265892.1| PREDICTED: sex determination protein tassels...   152   3e-35
ref|XP_002533789.1| short chain alcohol dehydrogenase, putative ...   151   5e-35

>ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|222854216|gb|EEE91763.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  154 bits (389), Expect = 7e-36
 Identities = 72/96 (75%), Positives = 85/96 (88%)
 Frame = -3

Query: 334 RLMSVNLRGMALGMKHAARVMIPQGHGCIISTASIAGIMGGLGSHAYTASKHAIIGLMKN 155
           R+M VN+RGMALG+KHAARVMIP+G GCIISTAS+AG+MGGLG HAYTASKHAI+GL KN
Sbjct: 139 RVMHVNVRGMALGIKHAARVMIPRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 198

Query: 154 VSGELGKYGIRVNCISPFGVVTPMTMNAWKEALDEE 47
            + ELG+YGIRVNCISPFGV T M +NAW+ + +EE
Sbjct: 199 TACELGRYGIRVNCISPFGVATSMLVNAWRSSGEEE 234


>ref|XP_003623493.1| Sex determination protein tasselseed-2 [Medicago truncatula]
           gi|355498508|gb|AES79711.1| Sex determination protein
           tasselseed-2 [Medicago truncatula]
          Length = 302

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/100 (72%), Positives = 88/100 (88%), Gaps = 2/100 (2%)
 Frame = -3

Query: 334 RLMSVNLRGMALGMKHAARVMIPQGHGCIISTASIAGIMGGLGSHAYTASKHAIIGLMKN 155
           R+M+VN++G+ALGMKHAA+VMIP+G+GCI+ST+S+AG++GGLG HAYTASKHAI+GL KN
Sbjct: 135 RVMNVNVKGVALGMKHAAKVMIPRGNGCIVSTSSVAGVLGGLGPHAYTASKHAIVGLTKN 194

Query: 154 VSGELGKYGIRVNCISPFGVVTPMTMNAWKEALDE--EGI 41
            S ELGKYGIRVNCISPFGV T M +NAW+   DE  EGI
Sbjct: 195 ASCELGKYGIRVNCISPFGVATSMLVNAWRNGEDEVDEGI 234


>ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|222867664|gb|EEF04795.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = -3

Query: 334 RLMSVNLRGMALGMKHAARVMIPQGHGCIISTASIAGIMGGLGSHAYTASKHAIIGLMKN 155
           R+M VN+RG+ALG+KHAARVMIP+G GCIISTAS+AG+MGGLG HAYTASKHAI+GL KN
Sbjct: 139 RVMQVNVRGVALGIKHAARVMIPRGVGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 198

Query: 154 VSGELGKYGIRVNCISPFGVVTPMTMNAWKEALDEEGIMD 35
            + ELG+YGIRVNCISPFGV T M +NAW+   +EE  ++
Sbjct: 199 TACELGRYGIRVNCISPFGVATSMLVNAWRSGDEEEDCLN 238


>ref|XP_002265892.1| PREDICTED: sex determination protein tasselseed-2-like [Vitis
           vinifera]
          Length = 303

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/96 (72%), Positives = 85/96 (88%)
 Frame = -3

Query: 334 RLMSVNLRGMALGMKHAARVMIPQGHGCIISTASIAGIMGGLGSHAYTASKHAIIGLMKN 155
           ++M VN+RGMALG+KHAARVM+P+G GCIISTAS+AG+MGGLG HAYTASKHAI+GL KN
Sbjct: 136 QVMRVNVRGMALGIKHAARVMVPRGMGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 195

Query: 154 VSGELGKYGIRVNCISPFGVVTPMTMNAWKEALDEE 47
            + ELG+YGIRVNCISPFGV T M +NAW+ + +EE
Sbjct: 196 TACELGRYGIRVNCISPFGVATSMLVNAWRSSDEEE 231


>ref|XP_002533789.1| short chain alcohol dehydrogenase, putative [Ricinus communis]
           gi|223526278|gb|EEF28591.1| short chain alcohol
           dehydrogenase, putative [Ricinus communis]
          Length = 303

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/96 (72%), Positives = 85/96 (88%)
 Frame = -3

Query: 334 RLMSVNLRGMALGMKHAARVMIPQGHGCIISTASIAGIMGGLGSHAYTASKHAIIGLMKN 155
           R+M VN++G+ALG+KHAARVMIP+G GCIISTAS+AG+MGGLG HAYTASKHAI+GL KN
Sbjct: 135 RVMRVNVKGVALGIKHAARVMIPRGVGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 194

Query: 154 VSGELGKYGIRVNCISPFGVVTPMTMNAWKEALDEE 47
            + ELG+YGIRVNCISPFGV T M +NAW+ + D+E
Sbjct: 195 TACELGRYGIRVNCISPFGVATSMLVNAWRSSDDQE 230


Top