BLASTX nr result

ID: Bupleurum21_contig00012254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012254
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB02890.1| putative small nuclear ribonucleoprotein polypept...   122   3e-26
ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleo...   120   1e-25
ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative ...   120   2e-25
ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
gb|ABK93558.1| unknown [Populus trichocarpa]                          120   2e-25

>gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
           [Jatropha curcas]
          Length = 80

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/61 (95%), Positives = 61/61 (100%)
 Frame = -2

Query: 185 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERNDIGMV 6
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+NDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKNDIGMV 60

Query: 5   V 3
           V
Sbjct: 61  V 61


>ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine max]
           gi|356572580|ref|XP_003554446.1| PREDICTED: probable
           small nuclear ribonucleoprotein G-like [Glycine max]
           gi|255625815|gb|ACU13252.1| unknown [Glycine max]
          Length = 79

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/61 (93%), Positives = 61/61 (100%)
 Frame = -2

Query: 185 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERNDIGMV 6
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNG+E+NDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 5   V 3
           V
Sbjct: 61  V 61


>ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
           gi|223530136|gb|EEF32048.1| small nuclear
           ribonucleoprotein G, putative [Ricinus communis]
          Length = 80

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/61 (93%), Positives = 60/61 (98%)
 Frame = -2

Query: 185 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERNDIGMV 6
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+ DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 5   V 3
           V
Sbjct: 61  V 61


>ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|222854442|gb|EEE91989.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/61 (93%), Positives = 60/61 (98%)
 Frame = -2

Query: 185 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERNDIGMV 6
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+ DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 5   V 3
           V
Sbjct: 61  V 61


>gb|ABK93558.1| unknown [Populus trichocarpa]
          Length = 80

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/61 (93%), Positives = 60/61 (98%)
 Frame = -2

Query: 185 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERNDIGMV 6
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+ DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 5   V 3
           V
Sbjct: 61  V 61


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