BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012246
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    62   1e-07
gb|ABR18790.1| class S F-box protein [Nicotiana alata]                 61   2e-07
gb|ABR18789.1| class S F-box protein [Nicotiana alata]                 58   2e-06
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06
gb|ABY82417.1| S-haplotype-specific F-box protein [Prunus pseudo...    56   6e-06

>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 17/239 (7%)
 Frame = -2

Query: 667 FITLHSNYHHQKVTNPKKYLLFYDKST----DFYTIRIDDIQCEEYLRLKKLVD-----S 515
           FI+ H N+  +       Y L   KS     + + + IDD   +E  R+ + +D      
Sbjct: 41  FISTHINHSIECNNRVHSYALVKQKSVPDCKERFILYIDDDSGDEPFRVYQELDFPFKGE 100

Query: 514 FIYELVS--NGLLCLFDD-IDTIYLCNPVIQKYKNXXXXXXXXXSYKRTVWKAVAFGFVQ 344
              E++S  NGL+CL D      YL NPVI+K                     V FGF  
Sbjct: 101 RYLEIISSCNGLVCLSDSQYARFYLWNPVIRKCLTILSSDSSFI---------VGFGFEY 151

Query: 343 EINDYLVVHMGRYGLKKNEPHTHHYIVACVYSLSTDSWKKITLXXXXXXXXXXSQCNSVF 164
           + NDY VV +  +  K N       ++  +Y LST +W+ IT+                +
Sbjct: 152 KKNDYKVVKIMHHPEKMNP-----VLIVKIYDLSTSAWRSITVENRTLLNFCFGDRKRAY 206

Query: 163 VNGVAIWAGNASRR----DRLLLC-FDTKTEMLRQILLPQWVQWRNFNSPIIHAFDQSI 2
            NGV  W   A  +    D+L L  FD   E+ R+++ P  +   N N   +  + +S+
Sbjct: 207 SNGVFHWLARAPGKEGSPDKLTLASFDLGDEVFREMMFPDDLAQVNENHLSLVVYGESL 265


>gb|ABR18790.1| class S F-box protein [Nicotiana alata]
          Length = 387

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
 Frame = -2

Query: 493 NGLLCLFDDIDTIYLCNPVIQKYKNXXXXXXXXXSYKRTVWKAVAFGFVQEINDYLVVHM 314
           NGL+ L D ++ + L NP  + Y+                   V FGF     DY +V  
Sbjct: 113 NGLIALTDKVNAV-LFNPATRHYRLLKPSPFDCPLGFYRSIDGVGFGFDSIAKDYKIV-- 169

Query: 313 GRYGLKKNEPHTHHYIV----ACVYSLSTDSWKKITLXXXXXXXXXXSQCNSVFVNGVAI 146
            R  +   +P  + + +      VY LSTDSW+++ L            C+  F NG + 
Sbjct: 170 -RISVIHGDPPFYDFNMREQKVEVYELSTDSWRELDLLDQHLPNVDYYPCSEKFYNGASH 228

Query: 145 WAGNASRRDRLLLCFDTKTEMLRQILLP 62
           W GN +    ++LCFD  TE+ R I +P
Sbjct: 229 WLGNDT--TLVILCFDMSTEIFRNIKMP 254


>gb|ABR18789.1| class S F-box protein [Nicotiana alata]
          Length = 394

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
 Frame = -2

Query: 493 NGLLCLFDDIDTIYLCNPVIQKYKNXXXXXXXXXSYKRTVWKAVAFGFVQEINDYLVVHM 314
           NGL+ L D ++ + L NP  + Y+                   V FGF   +NDY +V +
Sbjct: 122 NGLIFLTDKLNNV-LFNPTTRNYRLLTPSPFGCPLGFHRSINCVGFGFDLIVNDYKIVRI 180

Query: 313 GRYGLKKNEPHTHHYIV----ACVYSLSTDSWKKITLXXXXXXXXXXSQCNSVFVNGVAI 146
                 + EP  +   +      VY L TDSW+++            + C+ +F +G + 
Sbjct: 181 SEV---RGEPPFYCDSMREWKVEVYELRTDSWRELDQVNLQLPYVHWNPCSDMFYSGASH 237

Query: 145 WAGNASRRDRLLLCFDTKTEMLRQILLP 62
           W GNA+    ++LCFD  TE  R + +P
Sbjct: 238 WFGNAN--TVVILCFDLSTETFRNMKMP 263


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
 Frame = -2

Query: 580 YTIRIDDIQCEEYLRLK---KLVDSFIYEL-VSNGLLCLFDDIDTIY----LCNPVIQKY 425
           Y++R+D+    E+++L    K  +S+ + +  SNGL+CL +   ++     L NP+IQKY
Sbjct: 72  YSLRLDNQDFNEHMQLHFPFKSSESYFHVIGSSNGLICLANIFQSLIVSFILWNPLIQKY 131

Query: 424 KNXXXXXXXXXSYKRTVWKAVAFGFVQEINDYLVVHMGRYGLKKNEPHTHHYIVACVYSL 245
                           V+  V FG+    NDY ++ M     +K++  + ++    +YSL
Sbjct: 132 MIVKPRILGP------VYSFVGFGYDSRANDYKLIRM--VSFQKSKFRSENFPEIALYSL 183

Query: 244 STDSWKKITLXXXXXXXXXXSQCNSVFVNGVAIW-AGNASRRD---RLLLCFDTKTEMLR 77
           +  SW+ I             + +S F+NGV  W A  A + +    ++L FD   E+  
Sbjct: 184 NEGSWRGIR-QTGPLRYDTDQRVSSAFLNGVVHWIAYRADQHEGVSNVVLGFDMSDEIFL 242

Query: 76  QILLP 62
           +I LP
Sbjct: 243 EIALP 247


>gb|ABY82417.1| S-haplotype-specific F-box protein [Prunus pseudocerasus]
          Length = 375

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
 Frame = -2

Query: 496 SNGLLCLFDDI----DTIYLCNPVIQKYKNXXXXXXXXXSYKRTVWKAVAFGFVQEINDY 329
           SNGL+C+ DDI      IY+ NP ++K +           +      A+ FGF   +NDY
Sbjct: 114 SNGLVCISDDILNFDSPIYIWNPSVRKLRTPPISSNINIKFSHV---ALQFGFHPGVNDY 170

Query: 328 LVVHMGRYGLKKNEPHTHHYIVACVYSLSTDSWKKITLXXXXXXXXXXSQCNSVFVNGVA 149
            VV M R    KN       +   VYSL TDSWK I                 +F+NGVA
Sbjct: 171 KVVRMMR--TNKNA------LAVEVYSLRTDSWKMIEAIPPWLKCTWQDH-TGIFLNGVA 221

Query: 148 IWAGNASRRDRL--LLCFDTKTEMLRQILLP 62
               +   + R+  ++ FDT +E   + + P
Sbjct: 222 Y---HLIEKGRIFSIMSFDTGSEEFGEFITP 249