BLASTX nr result
ID: Bupleurum21_contig00012245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012245
(1275 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera] 276 e-105
ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like ... 273 e-105
ref|XP_002516384.1| transcription factor, putative [Ricinus comm... 254 2e-98
ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Popu... 249 2e-96
emb|CBI17295.3| unnamed protein product [Vitis vinifera] 237 7e-94
>emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 276 bits (705), Expect(2) = e-105
Identities = 176/367 (47%), Positives = 205/367 (55%), Gaps = 90/367 (24%)
Frame = +1
Query: 154 WNSLQFGMEIQANELNSSSEQIPNCYFNPNWDNSMDQNDPFESALSSIVSSPATSNLGIP 333
WN FGMEIQ+NELN SS+ + NC+ NPNWDNSMDQ+DPFESALSSIVSSP S+ G
Sbjct: 19 WN---FGMEIQSNELNCSSQAVQNCFLNPNWDNSMDQSDPFESALSSIVSSPVGSSAG-- 73
Query: 334 AKNGDQQNVVLRELIGRLGSICNSGDIXXXXXXXXXXXXXXX----------PLNSPPRL 483
GD ++ +RELIGRLGSICNSG+I PLNSPP+L
Sbjct: 74 GMPGD--SIAIRELIGRLGSICNSGEISPQSYIGGGGHGNTNNSNNTSCYNTPLNSPPKL 131
Query: 484 NLSVMDHQ---IRGGNLSNQLPFSP-------DPGFAERAAKFSCFGSG----------- 600
NLS+MDHQ IR +N LP P DPGFAERAA+FSCFG+G
Sbjct: 132 NLSIMDHQQHQIRTNFPTNHLPTHPSLAPFPADPGFAERAARFSCFGTGNFSGLSAQFGL 191
Query: 601 ---KLP-----------------KVGGSQMGIQENKN---------------GFLNSRSS 675
+LP K GSQ+G QE K+ G + SRSS
Sbjct: 192 NDTELPYRSSTGKLSRVSSNQSFKAAGSQLGAQEFKDRSPPQDGVSASDKKLGKI-SRSS 250
Query: 676 SLEKVEIGDSMEESSVSEQIPGGETGLRGQKEGNAKKRKAIPRGKAKEIPSDPSXXXXXX 855
+ + E+GDS EESSVSEQIPGGET L+GQ + N +KRK+IPRGKAKE+PS PS
Sbjct: 251 TPDNAELGDSREESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKV 310
Query: 856 XXXXXXSNSKRSKGDE------------------------GNQKQTKDNSKAQEPPKDYI 963
SN+KRSK DE GNQKQ+KDN K E PKDYI
Sbjct: 311 ASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPEAPKDYI 370
Query: 964 HVRARRG 984
HVRARRG
Sbjct: 371 HVRARRG 377
Score = 134 bits (338), Expect(2) = e-105
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +3
Query: 1068 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKL 1247
TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 380 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 439
Query: 1248 STVNPRMDF 1274
+TVNPRMDF
Sbjct: 440 ATVNPRMDF 448
>ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 273 bits (699), Expect(2) = e-105
Identities = 175/367 (47%), Positives = 204/367 (55%), Gaps = 90/367 (24%)
Frame = +1
Query: 154 WNSLQFGMEIQANELNSSSEQIPNCYFNPNWDNSMDQNDPFESALSSIVSSPATSNLGIP 333
WN GMEIQ+NELN SS+ + NC+ NPNWDNSMDQ+DPFESALSSIVSSP S+ G
Sbjct: 19 WN---LGMEIQSNELNCSSQAVQNCFLNPNWDNSMDQSDPFESALSSIVSSPVGSSAG-- 73
Query: 334 AKNGDQQNVVLRELIGRLGSICNSGDIXXXXXXXXXXXXXXX----------PLNSPPRL 483
GD ++ +RELIGRLGSICNSG+I PLNSPP+L
Sbjct: 74 GMPGD--SIAIRELIGRLGSICNSGEISPQSYIGGGGHGNTNNSNNTSCYNTPLNSPPKL 131
Query: 484 NLSVMDHQ---IRGGNLSNQLPFSP-------DPGFAERAAKFSCFGSG----------- 600
NLS+MDHQ IR +N LP P DPGFAERAA+FSCFG+G
Sbjct: 132 NLSIMDHQQHQIRTNFPTNHLPTHPSLAPFPADPGFAERAARFSCFGTGNFSGLSAQFGL 191
Query: 601 ---KLP-----------------KVGGSQMGIQENKN---------------GFLNSRSS 675
+LP K GSQ+G QE K+ G + SRSS
Sbjct: 192 NDTELPYRSSTGKLSRVSSNQSFKAAGSQLGAQEFKDRSPPQDGVSASDKKLGKI-SRSS 250
Query: 676 SLEKVEIGDSMEESSVSEQIPGGETGLRGQKEGNAKKRKAIPRGKAKEIPSDPSXXXXXX 855
+ + E+GDS EESSVSEQIPGGET L+GQ + N +KRK+IPRGKAKE+PS PS
Sbjct: 251 TPDNTELGDSREESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKV 310
Query: 856 XXXXXXSNSKRSKGDE------------------------GNQKQTKDNSKAQEPPKDYI 963
SN+KRSK DE GNQKQ+KDN K E PKDYI
Sbjct: 311 ASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPEAPKDYI 370
Query: 964 HVRARRG 984
HVRARRG
Sbjct: 371 HVRARRG 377
Score = 134 bits (338), Expect(2) = e-105
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +3
Query: 1068 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKL 1247
TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 380 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 439
Query: 1248 STVNPRMDF 1274
+TVNPRMDF
Sbjct: 440 ATVNPRMDF 448
>ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor,
putative [Ricinus communis]
Length = 534
Score = 254 bits (650), Expect(2) = 2e-98
Identities = 162/341 (47%), Positives = 191/341 (56%), Gaps = 63/341 (18%)
Frame = +1
Query: 151 IWNSLQFGMEIQA-NELNSSSEQIPNCYFNPNWDNSMDQNDPFESALSSIVSSPATSNLG 327
IWNS FGMEI + NELNS +QIPN +FN NW+NSMDQ+DPFESALSSIVSSP +
Sbjct: 19 IWNSCNFGMEISSSNELNS--DQIPNSFFNSNWENSMDQSDPFESALSSIVSSPNAN--A 74
Query: 328 IPAKNGDQQNVVLRELIGRLGSICNSGD------IXXXXXXXXXXXXXXXPLNSPPRLNL 489
+P NGD V++RELIGRLG+ICNS D I PLNSPP+LN+
Sbjct: 75 VPNSNGDP--VMIRELIGRLGNICNSRDISPQSYINTNNNNSTNTSCYTTPLNSPPKLNI 132
Query: 490 SVMDHQIRGGNLSNQ---------LPFSPDPGFAERAAKFSCFGSGKLPKVGGSQMGIQE 642
S++D QIRG +N P DPGF ERAA+FSCFGS + + G
Sbjct: 133 SILDSQIRGNTNTNNSHNLPIASLAPLPADPGFVERAARFSCFGSSR--NLSGLSGQFGS 190
Query: 643 NKNGFLN--------------------------------SRSSSLEKVEIGDSMEESSVS 726
N++ FL+ SRSS+ E E GDS EESS+S
Sbjct: 191 NESSFLSRIPATGSQVNASNVQQAVADGKPNSDRKLNVISRSSTPENAEFGDSREESSLS 250
Query: 727 EQIPGGETGLRGQKEG--NAKKRKAIPRGKAKEIP-SDPSXXXXXXXXXXXXSNSKRSKG 897
EQIPGGE ++ Q + +KRKAIPRGKAKE P S PS S +KRSK
Sbjct: 251 EQIPGGELSIKVQNNNDFSVRKRKAIPRGKAKETPSSSPSASDVKVAAEKDESTAKRSKS 310
Query: 898 DE------------GNQKQTKDNSKAQEPPKDYIHVRARRG 984
DE GNQKQ KDN+K EPPKDYIHVRARRG
Sbjct: 311 DEANGHDKAKAEQNGNQKQNKDNTKLPEPPKDYIHVRARRG 351
Score = 132 bits (332), Expect(2) = 2e-98
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = +3
Query: 1068 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKL 1247
TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 354 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 413
Query: 1248 STVNPRMD 1271
+TVNPRMD
Sbjct: 414 ATVNPRMD 421
>ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein
POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 249 bits (637), Expect(2) = 2e-96
Identities = 161/357 (45%), Positives = 197/357 (55%), Gaps = 79/357 (22%)
Frame = +1
Query: 151 IWNSLQFGMEIQANELNSSSEQIPNCYFNPNWDNSMDQNDPFESALSSIVSSPATSNL-- 324
IWNS FGME+QANEL+ E++ NC+ NPNWDNS+DQ+DPFESALSSIVSSP S
Sbjct: 18 IWNSCSFGMEMQANELSCGPEKLANCFLNPNWDNSLDQSDPFESALSSIVSSPVASGANA 77
Query: 325 ---GIPAKNGDQQNVVLRELIGRLGSICNSGDI-----XXXXXXXXXXXXXXXPLNSPPR 480
IP ++++RELIGRLG+ICNSGDI P+NSPP+
Sbjct: 78 NANAIPNAGVGGDSLMIRELIGRLGNICNSGDISLQSFVNNNNNSTNTSCYSTPMNSPPK 137
Query: 481 LNLSVMDHQIRG-----GNLSNQLP-FSPDPG-FAERAAKFSCFGS-------------- 597
LNLS+MD Q+RG GN + P +P P F ERAA++SCFGS
Sbjct: 138 LNLSMMDSQMRGNLPIPGNSVVKHPGLAPFPADFVERAARYSCFGSNNPGGINKQFGLNE 197
Query: 598 -------------GKLPKVGG--------SQMGIQEN-----KNGFLN-----SRSSSLE 684
GKL +V SQ +QE+ ++G LN SR S
Sbjct: 198 SELINRLMPRVEPGKLSRVSSNNSMKVTVSQANVQESNKSSPQDGSLNSEKKFSRQSRPT 257
Query: 685 KVEIGDSMEESSVSEQIPGGETGLRGQKEGNAKKRKAIPRGKAKEIP-SDPSXXXXXXXX 861
E GDS EESS+SEQ+PGG+ ++ Q + N++KRK+IPRGKAKE P S PS
Sbjct: 258 TSENGDSREESSLSEQVPGGKLSMKSQNDANSRKRKSIPRGKAKETPSSSPSASDVKVAA 317
Query: 862 XXXXSNSKRSKGDE----------------GNQKQTKDNSKAQEPPKDYIHVRARRG 984
S +KRSK DE GNQKQ K+NSK EPPKDYIHVRARRG
Sbjct: 318 ENDESKAKRSKSDETNGSDKDTAKEKEEENGNQKQNKNNSKPPEPPKDYIHVRARRG 374
Score = 130 bits (327), Expect(2) = 2e-96
Identities = 65/68 (95%), Positives = 68/68 (100%)
Frame = +3
Query: 1068 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKL 1247
TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 377 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 436
Query: 1248 STVNPRMD 1271
S+VNPRM+
Sbjct: 437 SSVNPRME 444
>emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 237 bits (605), Expect(2) = 7e-94
Identities = 148/304 (48%), Positives = 175/304 (57%), Gaps = 34/304 (11%)
Frame = +1
Query: 175 MEIQANELNSSSEQIPNCYFNPNWDNSMDQNDPFESALSSIVSSPATSNLGIPAKNGDQQ 354
MEIQ+NELN SS+ + NC+ NPNWDNSMDQ+DPFESALSSIVSSP S+
Sbjct: 1 MEIQSNELNCSSQAVQNCFLNPNWDNSMDQSDPFESALSSIVSSPVGSS----------- 49
Query: 355 NVVLRELIGRLGSICNSGDIXXXXXXXXXXXXXXXPLNSPPRLNLSVMDHQ---IRGGNL 525
G+ NS + PLNSPP+LNLS+MDHQ IR
Sbjct: 50 ---------GHGNTNNSNNTSCYNT----------PLNSPPKLNLSIMDHQQHQIRTNFP 90
Query: 526 SNQLPFSP-------DPGFAERAAKFSCFGSGKLPKVGGSQMGIQENKNGFLNSRSSSLE 684
+N LP P DPGFAERAA+FSCFG+G + +Q G+ + + L RSS+
Sbjct: 91 TNHLPTHPSLAPFPADPGFAERAARFSCFGTGNFSGLS-AQFGLNDTE---LPYRSSTGW 146
Query: 685 KVEIGDSMEESSVSEQIPGGETGLRGQKEGNAKKRKAIPRGKAKEIPSDPSXXXXXXXXX 864
K +GDS EESSVSEQIPGGET L+GQ + N +KRK+IPRGKAKE+PS PS
Sbjct: 147 K--LGDSREESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASD 204
Query: 865 XXXSNSKRSKGDE------------------------GNQKQTKDNSKAQEPPKDYIHVR 972
SN+KRSK DE GNQKQ+KDN K E PKDYIHVR
Sbjct: 205 KDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPEAPKDYIHVR 264
Query: 973 ARRG 984
ARRG
Sbjct: 265 ARRG 268
Score = 134 bits (338), Expect(2) = 7e-94
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +3
Query: 1068 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKL 1247
TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 271 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 330
Query: 1248 STVNPRMDF 1274
+TVNPRMDF
Sbjct: 331 ATVNPRMDF 339