BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012240
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containi...   116   4e-24
emb|CAN75138.1| hypothetical protein VITISV_040755 [Vitis vinifera]   113   4e-23
ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containi...    98   2e-18
ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containi...    96   8e-18
ref|XP_002516677.1| pentatricopeptide repeat-containing protein,...    91   2e-16

>ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Vitis vinifera]
          Length = 672

 Score =  116 bits (291), Expect = 4e-24
 Identities = 74/175 (42%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
 Frame = +1

Query: 1   FFNMMVGKLRMDDASYKFIMKSLFDIGKPDEVLQIVASMLRDDPSDFTTELQEFTKEELG 180
           F+++MV KL+MD+ASYKF+MK+LF++GK D+VL+++  ML DD S+FTT+LQEF KEEL 
Sbjct: 476 FYDLMVKKLKMDEASYKFLMKALFEVGKHDDVLKMIGDMLDDDASEFTTDLQEFVKEELR 535

Query: 181 KEGREDEVGKLMEDXXXXXXXXXXXXXXXXXXXXXXXXXXVASLIPSK-FRNKGSD-EDS 354
           KEGRE++V KLMED                          V+SL+PSK F +K ++ E  
Sbjct: 536 KEGREEDVVKLMEDKEREKAEAQAKEAAATEAAKASAKAAVSSLLPSKLFGSKDTENEPD 595

Query: 355 SANSEKSEATSENGE---VQEENVFGQVGEVGSGNVNSAEAMKAGDVLEAEVVSD 510
                  EA S N E   V++E++     E G     S EA KA +  + +V SD
Sbjct: 596 VVIGNTVEAISVNEEVEDVEQESIGDSPAESG-----SEEATKAHNSADLDVKSD 645


>emb|CAN75138.1| hypothetical protein VITISV_040755 [Vitis vinifera]
          Length = 637

 Score =  113 bits (283), Expect = 4e-23
 Identities = 73/175 (41%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
 Frame = +1

Query: 1   FFNMMVGKLRMDDASYKFIMKSLFDIGKPDEVLQIVASMLRDDPSDFTTELQEFTKEELG 180
           F+++MV KL+MD+ SYKF MK+LF++GK D+VL+++  ML DD S+FTT+LQEF KEEL 
Sbjct: 444 FYDLMVKKLKMDEXSYKFXMKALFEVGKHDDVLKMIGDMLDDDASEFTTDLQEFVKEELR 503

Query: 181 KEGREDEVGKLMEDXXXXXXXXXXXXXXXXXXXXXXXXXXVASLIPSK-FRNKGSD-EDS 354
           KEGRE++V KLMED                          V+SL+PSK F +K ++ E  
Sbjct: 504 KEGREEDVVKLMEDKEREKAEAQAKEAAATEAAKASAKAAVSSLLPSKLFGSKDTENEPD 563

Query: 355 SANSEKSEATSENGE---VQEENVFGQVGEVGSGNVNSAEAMKAGDVLEAEVVSD 510
                  EA S N E   V++E++     E G     S EA KA +  + +V SD
Sbjct: 564 VVIGNTVEAISVNEEVEDVEQESIGDSPAESG-----SEEATKAHNSADLDVKSD 613


>ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Glycine max]
          Length = 631

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 62/145 (42%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
 Frame = +1

Query: 1   FFNMMVGKLRMDDASYKFIMKSLFDIGKPDEVLQIVASMLRDDPSDFTTELQEFTKEELG 180
           FF +MV KL+MD  SY+FIMK L D G+ DE+L+IV ++L D+  DF  E QEF K EL 
Sbjct: 472 FFELMVKKLKMDVTSYQFIMKVLSDEGRLDEMLKIVDTLLDDNGVDFDEEFQEFVKGELR 531

Query: 181 KEGREDEVGKLMEDXXXXXXXXXXXXXXXXXXXXXXXXXXVASLIPSK-FRNKGSDEDS- 354
           KEGRE+E+ KLME+                          VASL+PSK F NK +D +S 
Sbjct: 532 KEGREEELTKLMEEKERLKAEAKAKEIEAAEAAKRSARAAVASLLPSKLFGNKETDLESK 591

Query: 355 ------SANSEKSEATSENGEVQEE 411
                 + N E + AT+   E+ EE
Sbjct: 592 REGEIQALNEENTNATASEAELVEE 616


>ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Glycine max]
          Length = 632

 Score = 95.9 bits (237), Expect = 8e-18
 Identities = 60/145 (41%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
 Frame = +1

Query: 1   FFNMMVGKLRMDDASYKFIMKSLFDIGKPDEVLQIVASMLRDDPSDFTTELQEFTKEELG 180
           FF +MV KL+MD ASY+F+MK L D G+ DE+LQIV ++L D+  DF  E QEF K EL 
Sbjct: 473 FFELMVKKLKMDVASYQFMMKVLSDEGRLDEMLQIVDTLLDDNGVDFDEEFQEFVKGELR 532

Query: 181 KEGREDEVGKLMEDXXXXXXXXXXXXXXXXXXXXXXXXXXVASLIPSK-FRNKGSDEDS- 354
           KEGRE+E+ KL+E+                          VASL+PSK F NK +D +S 
Sbjct: 533 KEGREEELTKLIEEKERLKAEAKAKDIEAAEAAKRSARAAVASLLPSKLFGNKETDSESK 592

Query: 355 ------SANSEKSEATSENGEVQEE 411
                 +   E + AT+   E+ E+
Sbjct: 593 TEGEIQALGEESANATASEAELAEK 617


>ref|XP_002516677.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544172|gb|EEF45696.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 660

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 66/176 (37%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
 Frame = +1

Query: 1   FFNMMVGKLRMDDASYKFIMKSLFDIGKPDEVLQIVASMLRDDPSDFTTELQEFTKEELG 180
           F+ +MV KL+MD+ASYKF+M++L D  + DE++++V  ML D+  +   ELQEF KE LG
Sbjct: 489 FYYLMVKKLKMDNASYKFMMEALADNDQMDELIKMVDGMLDDEAIELDLELQEFAKELLG 548

Query: 181 KEGREDEVGKLMEDXXXXXXXXXXXXXXXXXXXXXXXXXXVASLIPSK-FRNKGSD-EDS 354
           + GR +E+ +LME                           VASL+PSK F NK ++ E  
Sbjct: 549 RVGRGEELMELMEKKEKEKAEAKAKEAEAAEAAKRSAKAAVASLLPSKLFGNKEAETESK 608

Query: 355 SANSEKSEATS--ENGEVQEENVFGQVGEVGSGNVNSAEAMKAGDVLEAEVVSDGA 516
            AN   SEA S  E   V+E  + G V      ++N+ E +  G   E E  SD A
Sbjct: 609 EANGNGSEAASVNEGAPVEEATIVGSV----PADMNTKEDVIQG---ETEAKSDAA 657