BLASTX nr result
ID: Bupleurum21_contig00012239
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012239
(2420 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain... 257 1e-65
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain... 243 1e-61
ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b... 242 3e-61
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu... 239 2e-60
ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain... 223 2e-55
>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
vinifera]
Length = 2164
Score = 257 bits (656), Expect = 1e-65
Identities = 157/384 (40%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Frame = -1
Query: 2102 DLTSVRTQIVQLNNLIASLESRYLKVSVRREFLGRDSSGRLYWALADTGTQPSPISSGNT 1923
+L S++ I L + +AS+ES+ LK+SVRREFLG DS+GRLYW LA G P + G+
Sbjct: 1553 ELNSIKNDISDLQDSMASIESQLLKLSVRREFLGSDSAGRLYWILAKPGWHPWVLVDGSM 1612
Query: 1922 EMQQSRQIFSASFAEDVSNVRTDAAGSLDALRTFGSSGTSCLCPYEIYDN---NICPTWV 1752
+Q+ ++ D S + + S+D L T G S SC P+ N +IC WV
Sbjct: 1613 ALQKKEKMRYLKNPGDSSVQKNSTSLSMDILSTLGGSNASC--PFLYRPNASISICSQWV 1670
Query: 1751 TYNTDEEIKGLLDYLQDDNSSDRELKESILQWENLRTQG-----------NEATLSQPPE 1605
+Y + EEI L+ +L+D + ++ELKESIL LR + ++ TLS+ P
Sbjct: 1671 SYQSGEEIDALIGWLKDADPREKELKESILHLHKLRFRDWKLTGDPDQVDSQTTLSRFPN 1730
Query: 1604 CKKSTSSNSISTLATSFLEGKFGPRVAPEISDRRFK---RAKRIDQQKMCRCECLELIWP 1434
++ S+ + T A L K+GP PEI+D K R+K ++ KM RCECLE IW
Sbjct: 1731 -SENAFSDGLLTKAGILLGKKYGPWFEPEIADSSKKWDLRSKVTNESKMYRCECLEPIWS 1789
Query: 1433 SRPHCSTCHRSFLNYMELDGHIGGKCSMALPASDKCVSNEIP-KVKGMMKS--------- 1284
SR HC +CHR+F ++L+ H G C P S+K N K KG MKS
Sbjct: 1790 SRHHCPSCHRTFFTDIQLEEHNDGSCRSGPPTSEKSKENSSHLKGKGTMKSKISREESTG 1849
Query: 1283 -----ELGVGGYSA--SSVIRHQNDKLICPFDLEEICSRFVINESNKDLVNGIGLIGSNG 1125
E+ GG S S +I+ QN+ L+CP+D EEICS+FV SNK+LV IGLIGS G
Sbjct: 1850 DIDMVEIPKGGCSQPRSRLIKFQNEGLVCPYDFEEICSKFVTKNSNKELVQEIGLIGSKG 1909
Query: 1124 IPAFVPSVSPYISDSTAMLLPHEE 1053
+P+FV S PYISD+T +L+P E
Sbjct: 1910 VPSFVSSRPPYISDATLLLVPSGE 1933
Score = 172 bits (435), Expect = 5e-40
Identities = 87/144 (60%), Positives = 107/144 (74%)
Frame = -2
Query: 916 QAAAQHKRGKVSMHCCAPLCDAWSGCIVPEPSLRPLRGKAGCFLQQLKINLLDMDAALPE 737
++A + K K S++ P + C++P+ SLRPL GK L+QLKINLLDMDAALPE
Sbjct: 1977 KSALEQKDKKYSLNNNGPEMEVGRCCVIPQSSLRPLVGKVYQILRQLKINLLDMDAALPE 2036
Query: 736 EAIRPSKRKAEHRWAWRIFVKSAERIYELAQATVTLEDMIKSEYLRNTWWYWSSSTTAAK 557
EA++PS+ E R AWR FVKSAE I+E+ QAT+ LEDMIK+EYL N WWYWSS + AAK
Sbjct: 2037 EALKPSRADLEKRLAWRAFVKSAETIFEMVQATIMLEDMIKTEYLMNGWWYWSSLSAAAK 2096
Query: 556 ISTLSALALRIYSLDAAIYYNKTS 485
ST+S+LALRIYSLDAAI Y K S
Sbjct: 2097 TSTVSSLALRIYSLDAAIAYEKIS 2120
>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
[Cucumis sativus]
Length = 2131
Score = 243 bits (621), Expect = 1e-61
Identities = 181/543 (33%), Positives = 278/543 (51%), Gaps = 97/543 (17%)
Frame = -1
Query: 2414 KLMQNLRSTWAELKTLKCKEESLEAKAARSSRVL------GSDTEQGINKYFTRQYSSKL 2253
+L Q LRS + E K LKC+EE + A+AA+ + G + G + QYSS
Sbjct: 1349 ELQQKLRSCFIEWKNLKCREEVVAARAAKLDTTMLSAVREGQGSCDGARLGASDQYSSLT 1408
Query: 2252 KIDNT--NAACFTPDLAPSEDLQ-------GVSASFATESAG----------------VG 2148
++N N A F ++ + D+ V +S ++++G V
Sbjct: 1409 SLENKCHNHASFQEQMSSAHDVTDNNDAGGNVLSSSGSQNSGKPVKFNEPSLSGLPQEVD 1468
Query: 2147 ASSPSTL-------------------------------NNSQSDSQDLTSVRTQIVQLNN 2061
S S + N SQ+ +L S++ I+Q+ +
Sbjct: 1469 GSDQSNMETEISILPSGKQYFTPCDANGVPVAPQVPPPNESQAYHSELDSIKKDILQVQD 1528
Query: 2060 LIASLESRYLKVSVRREFLGRDSSGRLYWALADTGTQPSPISSGNTEM--QQSR-QIFSA 1890
IAS E LK+SVRREFLG D++GRLYWA + P ISSG++ +SR ++
Sbjct: 1529 SIASTELELLKISVRREFLGSDAAGRLYWASVMSNGLPQIISSGSSVHIGSESRDRVVKG 1588
Query: 1889 SFAEDVSNVRTDAAGSLDALRTFGSSGTSCLC--PYEIYDNNICPTWVTYNTDEEIKGLL 1716
F ++ ++ T A S T S+ S L P + N+ C ++Y T+ +I L+
Sbjct: 1589 RFFKNYTS--TSNANS----STLNSNMYSSLLHLPKDFIGNSPC---ISYQTEADILELI 1639
Query: 1715 DYLQDDNSSDRELKESILQWENLRTQGNEATLSQPPE--CKKSTSSNSISTL-------- 1566
D+L+D + +RELKESILQW + Q + + +Q PE K S+SS+ + L
Sbjct: 1640 DWLKDSDPKERELKESILQWLKPKLQTSSRSNNQSPEEQLKDSSSSSDVEKLECSGFLVN 1699
Query: 1565 -ATSFLEGKFGPR---VAPEISDRRFKRAKRIDQQKMCRCECLELIWPSRPHCSTCHRSF 1398
A++ LE K+GP V P+ +R +A+ + +KM RC C+E +WPSR HC +CHRSF
Sbjct: 1700 RASALLESKYGPFLEFVTPDDLNRWLDKARLAEDEKMFRCVCMEPVWPSRYHCLSCHRSF 1759
Query: 1397 LNYMELDGHIGGKCSMALPAS------------DKC---VSNEIPKVKGMMKSELGVGGY 1263
+EL+ H G+CS +LPAS KC ++ + M+ +E G +
Sbjct: 1760 STDVELEEHDNGQCS-SLPASCDGIKEVGDSSKSKCNIKFESKQEESSSMVIAETSRGYF 1818
Query: 1262 SAS-SVIRHQNDKLICPFDLEEICSRFVINESNKDLVNGIGLIGSNGIPAFVPSVSPYIS 1086
+ S +I++QND ++CP+D E ICS+F+ +SNKDL+ IGLI SNG+P+F+ SVSPYI
Sbjct: 1819 NHSMGLIKYQNDGMMCPYDFELICSKFLTKDSNKDLIKEIGLISSNGVPSFLSSVSPYIM 1878
Query: 1085 DST 1077
+ST
Sbjct: 1879 EST 1881
Score = 160 bits (406), Expect = 1e-36
Identities = 77/118 (65%), Positives = 95/118 (80%)
Frame = -2
Query: 838 IVPEPSLRPLRGKAGCFLQQLKINLLDMDAALPEEAIRPSKRKAEHRWAWRIFVKSAERI 659
++P+ S RPL GK ++ LK+NLLDMDAALP+EA++PSK E RWAWR FVKSA I
Sbjct: 1969 VIPQSSQRPLVGKILQVVRGLKMNLLDMDAALPDEALKPSKLHIERRWAWRAFVKSAGTI 2028
Query: 658 YELAQATVTLEDMIKSEYLRNTWWYWSSSTTAAKISTLSALALRIYSLDAAIYYNKTS 485
YE+ QAT+ LEDMI++EYL+N WWYWSS + AAKIST+S+LALRI+SLDAAI Y K S
Sbjct: 2029 YEMVQATIALEDMIRTEYLKNEWWYWSSLSAAAKISTVSSLALRIFSLDAAIIYEKIS 2086
>ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing
protein 9-like [Cucumis sativus]
Length = 1277
Score = 242 bits (618), Expect = 3e-61
Identities = 180/543 (33%), Positives = 278/543 (51%), Gaps = 97/543 (17%)
Frame = -1
Query: 2414 KLMQNLRSTWAELKTLKCKEESLEAKAARSSRVL------GSDTEQGINKYFTRQYSSKL 2253
+L Q LRS + E K LKC+EE + A+AA+ + G + G + QYSS
Sbjct: 495 ELQQKLRSCFIEWKNLKCREEVVAARAAKLDTTMLSAVREGQGSCDGARLGASDQYSSLT 554
Query: 2252 KIDNT--NAACFTPDLAPSEDLQ-------GVSASFATESAG----------------VG 2148
++N N A F ++ + D+ V +S ++++G V
Sbjct: 555 SLENKCHNHASFQEQMSSAHDVTDNNDAGGNVLSSSGSQNSGKPVKFNEPSLSGLPQEVD 614
Query: 2147 ASSPSTL-------------------------------NNSQSDSQDLTSVRTQIVQLNN 2061
S S + N SQ+ +L S++ I+Q+ +
Sbjct: 615 GSDQSNMETEISILPSGKQYFTPCDANGVPVAPQVPPPNESQAYHSELDSIKKDILQVQD 674
Query: 2060 LIASLESRYLKVSVRREFLGRDSSGRLYWALADTGTQPSPISSGNTEM--QQSR-QIFSA 1890
IAS E LK+SVRREFLG D++GRLYWA + P ISSG++ +SR ++
Sbjct: 675 SIASTELELLKISVRREFLGSDAAGRLYWASVMSNGLPQIISSGSSVHIGSESRDRVVKG 734
Query: 1889 SFAEDVSNVRTDAAGSLDALRTFGSSGTSCLC--PYEIYDNNICPTWVTYNTDEEIKGLL 1716
F ++ ++ T A S T S+ S L P + N+ C ++Y T+ +I L+
Sbjct: 735 RFFKNYTS--TSNANS----STLNSNMYSSLLHLPKDFIGNSPC---ISYQTEADILELI 785
Query: 1715 DYLQDDNSSDRELKESILQWENLRTQGNEATLSQPPE--CKKSTSSNSISTL-------- 1566
D+L+D + +RELKESILQW + Q + + +Q PE K S+SS+ + L
Sbjct: 786 DWLKDSDPKERELKESILQWLKPKLQTSSRSNNQSPEEQLKDSSSSSDVEKLECSGFLVN 845
Query: 1565 -ATSFLEGKFGPR---VAPEISDRRFKRAKRIDQQKMCRCECLELIWPSRPHCSTCHRSF 1398
A++ LE K+GP V P+ +R +A+ + +KM RC C+E +WPSR HC +CH+SF
Sbjct: 846 RASALLESKYGPFLEFVTPDDLNRWLDKARLAEDEKMFRCVCMEPVWPSRYHCLSCHKSF 905
Query: 1397 LNYMELDGHIGGKCSMALPAS------------DKC---VSNEIPKVKGMMKSELGVGGY 1263
+EL+ H G+CS +LPAS KC ++ + M+ +E G +
Sbjct: 906 STDVELEEHDNGQCS-SLPASCDGIKEVGDSSKSKCNIKFESKQEESSSMVIAETSRGYF 964
Query: 1262 SAS-SVIRHQNDKLICPFDLEEICSRFVINESNKDLVNGIGLIGSNGIPAFVPSVSPYIS 1086
+ S +I++QND ++CP+D E ICS+F+ +SNKDL+ IGLI SNG+P+F+ SVSPYI
Sbjct: 965 NHSMGLIKYQNDGMMCPYDFELICSKFLTKDSNKDLIKEIGLISSNGVPSFLSSVSPYIM 1024
Query: 1085 DST 1077
+ST
Sbjct: 1025 EST 1027
Score = 160 bits (406), Expect = 1e-36
Identities = 77/118 (65%), Positives = 95/118 (80%)
Frame = -2
Query: 838 IVPEPSLRPLRGKAGCFLQQLKINLLDMDAALPEEAIRPSKRKAEHRWAWRIFVKSAERI 659
++P+ S RPL GK ++ LK+NLLDMDAALP+EA++PSK E RWAWR FVKSA I
Sbjct: 1115 VIPQSSQRPLVGKILQVVRGLKMNLLDMDAALPDEALKPSKLHIERRWAWRAFVKSAGTI 1174
Query: 658 YELAQATVTLEDMIKSEYLRNTWWYWSSSTTAAKISTLSALALRIYSLDAAIYYNKTS 485
YE+ QAT+ LEDMI++EYL+N WWYWSS + AAKIST+S+LALRI+SLDAAI Y K S
Sbjct: 1175 YEMVQATIALEDMIRTEYLKNEWWYWSSLSAAAKISTVSSLALRIFSLDAAIIYEKIS 1232
>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
gi|223543360|gb|EEF44891.1| DNA binding protein, putative
[Ricinus communis]
Length = 2145
Score = 239 bits (611), Expect = 2e-60
Identities = 177/562 (31%), Positives = 272/562 (48%), Gaps = 109/562 (19%)
Frame = -1
Query: 2414 KLMQNLRSTWAELKTLKCKEESLEAKAARS------------------------------ 2325
++ Q LR+ +AE K LK KEE + K+A+
Sbjct: 1353 EVQQKLRTLYAEWKNLKSKEEFMALKSAKMGTGASGEVKEGLVSALKDQGKSVGQPPVLG 1412
Query: 2324 -------------SRVLGSDTEQGIN---------KYFTRQYSSKLKIDNTNAACFTPDL 2211
S V GS GIN Y + ID+TN D+
Sbjct: 1413 DKPSDCCAPSDDVSAVDGSPEGNGINGFDKHPSEINYEKKPSHDSQNIDSTNNHGPVKDM 1472
Query: 2210 APSEDLQGVSASFATESAGVGASSPS------------------TLNNSQSDSQDLTSVR 2085
+ ++G + S +G + P T+N SQ+ D+++++
Sbjct: 1473 --HDAMEGSNDPSKENSKPLGPNHPGFSLSSDMNALVVLNLPSVTMNESQAYHTDVSAIK 1530
Query: 2084 TQIVQLNNLIASLESRYLKVSVRREFLGRDSSGRLYWALADTGTQPSPISSGNTEMQQSR 1905
I++L NLI+S+ES+ K S+RREFLG DS G LYWA A P + + Q +
Sbjct: 1531 DDILRLQNLISSMESQLSKQSLRREFLGSDSRGHLYWASATPNGHPQIVVDRSLTFQHRK 1590
Query: 1904 ----QIFSASFAEDVSNVRTDAAGSLDALRT-----FGSSGTSCLCPYEIYDNNICPTWV 1752
++ ++S + S+ DA +L+ R F +GT ++ WV
Sbjct: 1591 ISHHRLGNSSVLQHSSSSGIDACLNLEGSRACFPFLFNPNGTL----------SMSSAWV 1640
Query: 1751 TYNTDEEIKGLLDYLQDDNSSDRELKESILQWENLRTQGNEATLSQ-PPECKKSTSS--- 1584
+Y TD EI+ L+ +L ++N + ELKESI+QW LR Q ++ EC+ S+
Sbjct: 1641 SYETDAEIEELIGWLGNNNQKEIELKESIMQWLKLRFQESQRIRDPVQEECRAGLSTIRN 1700
Query: 1583 ------NSISTLATSFLEGKFGPRVAPEISD---RRFKRAKRIDQQKMCRCECLELIWPS 1431
++ T AT LE +G V + SD +R K+A+ +++K RC+CLELIWPS
Sbjct: 1701 NDQTAFSNCLTKATLLLEKNYGAFVELDTSDMLKKRGKKARGTNEEKTYRCDCLELIWPS 1760
Query: 1430 RPHCSTCHRSFLNYMELDGHIGGKCSMALPASDKCV-SNEIPKVKGMMKSEL-------- 1278
R HC +CHR+ N +E +GH G+CS + +K +N+ K +G +K+E+
Sbjct: 1761 RNHCYSCHRTSSNDVEFEGHSDGRCSSVPQSREKSEETNDSLKGRGNVKAEVTWKEKKSE 1820
Query: 1277 ------GVGGYSA--SSVIRHQNDKLICPFDLEEICSRFVINESNKDLVNGIGLIGSNGI 1122
+GG S + +I+ QN+ + CP+DL +ICS+FV +SNK+LV IGLIGSNGI
Sbjct: 1821 IDKLHSSMGGLSELRARLIKFQNEGINCPYDLLDICSKFVTEDSNKELVQDIGLIGSNGI 1880
Query: 1121 PAFVPSVSPYISDSTAMLLPHE 1056
P FV S+SPY+SDS ++L+ E
Sbjct: 1881 PPFVTSISPYLSDSISVLISPE 1902
Score = 171 bits (434), Expect = 6e-40
Identities = 84/140 (60%), Positives = 103/140 (73%)
Frame = -2
Query: 904 QHKRGKVSMHCCAPLCDAWSGCIVPEPSLRPLRGKAGCFLQQLKINLLDMDAALPEEAIR 725
Q + K S+ C P C+VPE SL PL GK L+QLKINLLDM+AALPEEA+R
Sbjct: 1963 QRRGKKSSLGKCFPEMGPGCCCVVPESSLMPLVGKVSSILRQLKINLLDMEAALPEEALR 2022
Query: 724 PSKRKAEHRWAWRIFVKSAERIYELAQATVTLEDMIKSEYLRNTWWYWSSSTTAAKISTL 545
P+K + RWAWR +VKSAE IY++ +AT+ LE+MIK+EYLRN WWYWSS + AAK ST+
Sbjct: 2023 PAKGQLGRRWAWRAYVKSAESIYQMVRATIMLEEMIKTEYLRNEWWYWSSLSAAAKTSTV 2082
Query: 544 SALALRIYSLDAAIYYNKTS 485
++LALRIYSLDA I Y K S
Sbjct: 2083 ASLALRIYSLDACIVYEKNS 2102
>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
vinifera]
Length = 2060
Score = 223 bits (567), Expect = 2e-55
Identities = 149/390 (38%), Positives = 214/390 (54%), Gaps = 32/390 (8%)
Frame = -1
Query: 2120 SQSDSQDLTSVRTQIVQLNNLIASLESRYLKVSVRREFLGRDSSGRLYWALADTGTQPSP 1941
SQ+ +Q+ S++ +I L + IASLES+ LKVS+R+EFLG+DS+GRLYW + GT P
Sbjct: 1416 SQAYNQEADSLKNEISVLQDSIASLESQLLKVSMRKEFLGKDSAGRLYWVFSRAGTSPWV 1475
Query: 1940 ISSGNTEMQQSRQIFSASFAEDVSNVRTDAAGSLDALRTFG-SSGTSCLCPYEIYDNN-- 1770
+ G+ M + A ED + GS R SS + ++D
Sbjct: 1476 VIDGS--MMAGLRGGEAKEHEDTLANNSTLRGSFPCGREKKFSSREFNISNRHMHDQEYS 1533
Query: 1769 --ICPTWVTYNTDEEIKGLLDYLQDDNSSDRELKESILQWENLRTQGNEATLS-----QP 1611
+ WV+ +++EI+ L+ +L+D+ +REL ESILQW+ + + + S QP
Sbjct: 1534 IPMSFPWVSCQSNDEIEELIQWLRDNEPRERELLESILQWQRTKYKDSNKAKSYVKDEQP 1593
Query: 1610 PECKKSTSSNSISTLAT---SFLEGKFGPRVAPEISDRRFKRAKRI---DQQKMCRCECL 1449
K S ++ L T + LE K+GP + E +D KR +Q+M RCECL
Sbjct: 1594 TSSKTKNSERTLDYLKTRAGTILEKKYGPCMELEATDIPKKRCPNSLVRCEQRMHRCECL 1653
Query: 1448 ELIWPSRPHCSTCHRSFLNYMELDGHIGGKCSMALPASDKC-VSNEIPKVKGMMKSEL-- 1278
E IWPSR HC TCH+SF EL GH CS AS+ V++E K K MM ++
Sbjct: 1654 EPIWPSRKHCLTCHQSFSTSEELKGHDDRICSSGASASENSMVNDESGKGKMMMNTDALQ 1713
Query: 1277 ----GVGGYSASSVIRHQ--------NDKLICPFDLEEICSRFVINESNKDLVNGIGLIG 1134
+G AS +H+ + +LICPFD+EEI ++F++ SNK+LV IGLIG
Sbjct: 1714 EHSDDLGMIGASKSEKHETVSGLINFDKELICPFDIEEISTKFIVKSSNKELVREIGLIG 1773
Query: 1133 SNGIPAFVPSVSP-YISDSTAMLLPHEEAV 1047
SNGIP+F+P+ SP Y++D T MLL E V
Sbjct: 1774 SNGIPSFLPNTSPYYLNDPTLMLLARENEV 1803
Score = 159 bits (403), Expect = 3e-36
Identities = 79/137 (57%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Frame = -2
Query: 841 CIVPEPSLRPLRGKAGCFLQQLKINLLDMDAALPEEAIRPSKRKAEHRWAWRIFVKSAER 662
CI+ E SL+PL G A FL++LKI+LLDMDAALPEEA++PS E R AWR FVKSA
Sbjct: 1882 CIINESSLKPLEGWASQFLRKLKIDLLDMDAALPEEAVKPSNASLERRCAWRAFVKSAVS 1941
Query: 661 IYELAQATVTLEDMIKSEYLRNTWWYWSSSTTAAKISTLSALALRIYSLDAAIYYN--KT 488
I+++ Q+T+ LE+MIK+EYLRN WWYWSS + AAKIS +S+LALRIY+LDAAI Y+
Sbjct: 1942 IFQMVQSTIILENMIKTEYLRNGWWYWSSLSAAAKISNISSLALRIYTLDAAIVYDGPLP 2001
Query: 487 SCAETPQKKISTNKRKE 437
C+ T +K+ + K+
Sbjct: 2002 GCSSTEIEKLGSESDKK 2018