BLASTX nr result

ID: Bupleurum21_contig00012232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012232
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525921.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_002517530.1| Disease resistance protein RPS5, putative [R...    55   4e-06

>ref|XP_002525921.1| conserved hypothetical protein [Ricinus communis]
           gi|223534750|gb|EEF36441.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/80 (41%), Positives = 43/80 (53%)
 Frame = -2

Query: 282 WTLPGEGKIKINTDAALFDTSNCHSFSMVVRNHTGDLIEARSKCKQGNTGPELAEAMGIH 103
           W  P    +KIN DA +F   N   + MVVRNH  +L+ AR+    G     LAEAM + 
Sbjct: 53  WRKPHNEYLKINEDAGIFQAQNRTGYGMVVRNHAANLVAARALIIHGVYEANLAEAMAVR 112

Query: 102 EALSW*RKMIAEEWNWSPIA 43
           EALSW + M     NWS ++
Sbjct: 113 EALSWIKHM-----NWSRVS 127


>ref|XP_002517530.1| Disease resistance protein RPS5, putative [Ricinus communis]
            gi|223543162|gb|EEF44694.1| Disease resistance protein
            RPS5, putative [Ricinus communis]
          Length = 1066

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
 Frame = -2

Query: 294  GAEQWTLPGEGKIKINTDAALFDTSNCHSFSMVVRNHTGDLIEARSKCKQGNTGPELAEA 115
            G+  W  P +G + +N DAA F   N   + M+ R+ +G  I AR+    G      AEA
Sbjct: 937  GSISWFKPPQGWLIVNADAATFGRENRTGWGMIARDGSGYFIAARALSLDGCFEVRDAEA 996

Query: 114  MGIHEALSW*RKMIAEEWNWSPIA-----WLLYRPFEAI 13
            MG+ EALSW     A +  W+ +      W  + P+ +I
Sbjct: 997  MGVREALSW-----ANQMGWNAVVLEMEHWWFFGPYSSI 1030


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