BLASTX nr result

ID: Bupleurum21_contig00012226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012226
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331929.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_002336365.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_002525667.1| conserved hypothetical protein [Ricinus comm...    75   4e-12
ref|XP_003549162.1| PREDICTED: uncharacterized protein LOC100812...    75   7e-12
ref|XP_002331381.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>ref|XP_002331929.1| predicted protein [Populus trichocarpa] gi|222874601|gb|EEF11732.1|
           predicted protein [Populus trichocarpa]
          Length = 802

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
 Frame = +3

Query: 18  VLLTLSIGFFLGVVTIISXXXXXXXXXXXKLNRKNVKDEETKHPSREVHGDHLD----LS 185
           V++  + GF  G++T+++           +LNRK  + + +   S   H   LD    L 
Sbjct: 4   VVVIFAGGFLSGLLTLVALQALGVYVLIKRLNRKTQQQQASHSSSSSPHHQDLDPQQSLD 63

Query: 186 YP-NKQGPVWVLDAEKIPKNWVGDKGSREQKKKIEVLEVTPVRKYAKLKDQLL 341
           Y  NK+G VWVLD++++ KNW  +K  ++QKKK E+LEVTP+RK AK+KD+ L
Sbjct: 64  YAHNKKGYVWVLDSDQVLKNWPVEKVQKDQKKKKELLEVTPIRKQAKIKDRSL 116


>ref|XP_002336365.1| predicted protein [Populus trichocarpa] gi|222834815|gb|EEE73264.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
 Frame = +3

Query: 18  VLLTLSIGFFLGVVTIISXXXXXXXXXXXKLNRKNVKDEETKHPSREVHGDHLD----LS 185
           V++  + GF  G++T+++           +LNRK  + + +   S   H   LD    L 
Sbjct: 4   VVVIFAGGFLSGLLTLVALQALGVYVLIKRLNRKTQQQQASHSSSSSPHHQDLDPQQSLD 63

Query: 186 YP-NKQGPVWVLDAEKIPKNWVGDKGSREQKKKIEVLEVTPVRKYAKLKDQLL 341
           Y  NK+G VWVLD++++ KNW  +K  ++QKKK E+LEVTP+RK AK+KD+ L
Sbjct: 64  YAHNKKGYVWVLDSDQVLKNWPVEKVQKDQKKKKELLEVTPIRKQAKIKDRSL 116


>ref|XP_002525667.1| conserved hypothetical protein [Ricinus communis]
           gi|223535103|gb|EEF36785.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 792

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
 Frame = +3

Query: 21  LLTLSIGFFLGVVTIISXXXXXXXXXXXKLNRKNVKDEETKHPSREVHGDH---LDLSYP 191
           LL    GFF+G V I++           +LN K ++ E+    S   H D    LD ++ 
Sbjct: 7   LLVFGGGFFVGSVAIVALEALLLYFFLKRLNHK-IRQEDGAADSSLQHLDSQQSLDFAF- 64

Query: 192 NKQGPVWVLDAEKIPKNWVGDKGSREQKKKIEVLEVTPVRKYAKLKDQLL 341
           +K+G VW+++++K+PKN   DK S+E KKK EV+EV PVRKYA +KD++L
Sbjct: 65  DKKGVVWIIESDKVPKN---DKVSKEPKKKKEVIEVNPVRKYANIKDRIL 111


>ref|XP_003549162.1| PREDICTED: uncharacterized protein LOC100812281 [Glycine max]
          Length = 801

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = +3

Query: 36  IGFFLGVVTIISXXXXXXXXXXXKLNRKNVKDEETKHPSREVHG---DHLDLSYPNKQGP 206
           +GF LGVV +++           +L  K  KD+       ++ G   DH       K+G 
Sbjct: 10  LGFLLGVVAVVAAEALGFLWVIKRLQSKISKDQAKIASKTQLGGAQSDHPQQQLLKKEGV 69

Query: 207 VWVLDAEKIPKNWVGDKGSREQKKKIEVLEVTPVRKYAKLKDQLL 341
           VWVL+ +K+ K WV +K S+EQK+K EVLEVTPVRKY K+  Q L
Sbjct: 70  VWVLEPDKVSKFWV-EKQSKEQKRKKEVLEVTPVRKYGKINGQSL 113


>ref|XP_002331381.1| predicted protein [Populus trichocarpa] gi|222873595|gb|EEF10726.1|
           predicted protein [Populus trichocarpa]
          Length = 776

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
 Frame = +3

Query: 39  GFFLGVVTIISXXXXXXXXXXXKLNRK-NVKDEETKHPSREVHGD---HLDLSYP-NKQG 203
           GF  G++T+++           +LNRK +++ ++    S   H D      L Y  NK+G
Sbjct: 11  GFVSGLLTLVALQALGVYFFIKRLNRKTHLQPQQQASHSSSPHQDLDPQQSLYYAFNKKG 70

Query: 204 PVWVLDAEKIPKNWVGDKGSREQKKKIEVLEVTPVRKYAKLKDQLL 341
            VWVL+++K+P NW  +K  ++QK+K E+LEVTP+RK+A +KD+ L
Sbjct: 71  IVWVLESDKVPGNWPVEKVPKDQKRKREILEVTPIRKHANIKDRSL 116


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