BLASTX nr result

ID: Bupleurum21_contig00012222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012222
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240013.1| uncharacterized protein LOC100804423 [Glycin...   196   2e-48
ref|XP_002303297.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_003543635.1| PREDICTED: auxin-responsive protein IAA27-li...   191   5e-47
emb|CBI36106.3| unnamed protein product [Vitis vinifera]              191   5e-47
ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-li...   191   5e-47

>ref|NP_001240013.1| uncharacterized protein LOC100804423 [Glycine max]
           gi|255636791|gb|ACU18729.1| unknown [Glycine max]
          Length = 319

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/142 (68%), Positives = 108/142 (76%), Gaps = 4/142 (2%)
 Frame = +3

Query: 30  VQEKK----TSTGHVTAPAPKAQVVGWPPIRSFRXXXXXXXXXXXXXXXEESSSLGCLYV 197
           VQEK      + GH +APA KAQVVGWPPIRSFR               E  S  GCLYV
Sbjct: 143 VQEKNDQVAATNGHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDDDEGKSGFGCLYV 202

Query: 198 KVSMDGAPYLRKVDLRTYSSYTDLSSALEKMFSCFTIGQCTSNGLPEREGLTASRLKDLV 377
           KVSMDGAPYLRKVDL+TY++Y +LSSALEKMFSCFTIGQC S GLP ++GL+ S L+DL+
Sbjct: 203 KVSMDGAPYLRKVDLKTYNNYMELSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLL 262

Query: 378 HGSEYVLTYEDKDGDWMLVGDV 443
           HGSEYVLTYEDKDGDWMLVGDV
Sbjct: 263 HGSEYVLTYEDKDGDWMLVGDV 284


>ref|XP_002303297.1| predicted protein [Populus trichocarpa] gi|222840729|gb|EEE78276.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  191 bits (486), Expect = 4e-47
 Identities = 94/144 (65%), Positives = 109/144 (75%)
 Frame = +3

Query: 12  EPSLDVVQEKKTSTGHVTAPAPKAQVVGWPPIRSFRXXXXXXXXXXXXXXXEESSSLGCL 191
           +P  + + +   +  + +APA KAQVVGWPPIRSFR               E  S  GCL
Sbjct: 171 KPVQEKISQVAAANENSSAPAAKAQVVGWPPIRSFRKNTMASSLVKNNEDVEGKSGYGCL 230

Query: 192 YVKVSMDGAPYLRKVDLRTYSSYTDLSSALEKMFSCFTIGQCTSNGLPEREGLTASRLKD 371
           YVKVSMDGAPYLRKVDL+TYS+Y +LSSALEKMFSCFTIGQC S+GL  ++GLT SRLKD
Sbjct: 231 YVKVSMDGAPYLRKVDLKTYSNYLELSSALEKMFSCFTIGQCGSHGLRGQDGLTESRLKD 290

Query: 372 LVHGSEYVLTYEDKDGDWMLVGDV 443
           ++HGSEYVLTYEDKDGDWMLVGDV
Sbjct: 291 ILHGSEYVLTYEDKDGDWMLVGDV 314


>ref|XP_003543635.1| PREDICTED: auxin-responsive protein IAA27-like [Glycine max]
          Length = 307

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/132 (69%), Positives = 102/132 (77%)
 Frame = +3

Query: 48  STGHVTAPAPKAQVVGWPPIRSFRXXXXXXXXXXXXXXXEESSSLGCLYVKVSMDGAPYL 227
           +  H  APA KAQVVGWPPIRSFR               E  S  GCLYVKVSMDGAPYL
Sbjct: 141 TNAHAIAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKSGFGCLYVKVSMDGAPYL 200

Query: 228 RKVDLRTYSSYTDLSSALEKMFSCFTIGQCTSNGLPEREGLTASRLKDLVHGSEYVLTYE 407
           RKVDL+TY++Y +LSSALEKMFSCFTIGQC S GLP ++GL+ S L+DL+HGSEYVLTYE
Sbjct: 201 RKVDLKTYNNYMELSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYE 260

Query: 408 DKDGDWMLVGDV 443
           DKDGDWMLVGDV
Sbjct: 261 DKDGDWMLVGDV 272


>emb|CBI36106.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  191 bits (485), Expect = 5e-47
 Identities = 99/142 (69%), Positives = 106/142 (74%), Gaps = 4/142 (2%)
 Frame = +3

Query: 30  VQEKKTSTG----HVTAPAPKAQVVGWPPIRSFRXXXXXXXXXXXXXXXEESSSLGCLYV 197
           VQEKK        H +APA KAQVVGWPPIRSFR               E  S LGCLYV
Sbjct: 117 VQEKKPQASAANEHASAPAAKAQVVGWPPIRSFRKNTMASSAKNNEDA-EGKSGLGCLYV 175

Query: 198 KVSMDGAPYLRKVDLRTYSSYTDLSSALEKMFSCFTIGQCTSNGLPEREGLTASRLKDLV 377
           KVSMDGAPYLRKVDL+ Y +Y +LSSALEKMFSCFTIGQC S+GLP R+GLT S L DL+
Sbjct: 176 KVSMDGAPYLRKVDLKIYCNYMELSSALEKMFSCFTIGQCGSHGLPGRDGLTESHLMDLL 235

Query: 378 HGSEYVLTYEDKDGDWMLVGDV 443
           HGSEYVLTYEDKDGDWMLVGDV
Sbjct: 236 HGSEYVLTYEDKDGDWMLVGDV 257


>ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-like isoform 1 [Vitis
           vinifera]
          Length = 343

 Score =  191 bits (485), Expect = 5e-47
 Identities = 99/142 (69%), Positives = 106/142 (74%), Gaps = 4/142 (2%)
 Frame = +3

Query: 30  VQEKKTSTG----HVTAPAPKAQVVGWPPIRSFRXXXXXXXXXXXXXXXEESSSLGCLYV 197
           VQEKK        H +APA KAQVVGWPPIRSFR               E  S LGCLYV
Sbjct: 168 VQEKKPQASAANEHASAPAAKAQVVGWPPIRSFRKNTMASSAKNNEDA-EGKSGLGCLYV 226

Query: 198 KVSMDGAPYLRKVDLRTYSSYTDLSSALEKMFSCFTIGQCTSNGLPEREGLTASRLKDLV 377
           KVSMDGAPYLRKVDL+ Y +Y +LSSALEKMFSCFTIGQC S+GLP R+GLT S L DL+
Sbjct: 227 KVSMDGAPYLRKVDLKIYCNYMELSSALEKMFSCFTIGQCGSHGLPGRDGLTESHLMDLL 286

Query: 378 HGSEYVLTYEDKDGDWMLVGDV 443
           HGSEYVLTYEDKDGDWMLVGDV
Sbjct: 287 HGSEYVLTYEDKDGDWMLVGDV 308


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