BLASTX nr result

ID: Bupleurum21_contig00012198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012198
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534073.1| RNA-binding protein, putative [Ricinus commu...   112   3e-23
emb|CBI30812.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002271605.1| PREDICTED: protein MEI2-like 2-like [Vitis v...   112   4e-23
ref|XP_002306739.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002519750.1| RNA-binding protein, putative [Ricinus commu...   110   1e-22

>ref|XP_002534073.1| RNA-binding protein, putative [Ricinus communis]
           gi|223525900|gb|EEF28317.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 779

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/87 (63%), Positives = 68/87 (78%)
 Frame = -3

Query: 263 YSARPNPMFHGDGRYLEVSPINVEVPTERGRSSRREQSASQVDNKKQFQLDLEKILKGED 84
           + +  +PMF G+  YL    I+ +V  ERGRS R E   +Q+D+KKQ+QLDL+KI+ GED
Sbjct: 590 FPSHNSPMFLGNASYLGPGTISSDVFAERGRSRRLENYGNQIDSKKQYQLDLDKIISGED 649

Query: 83  ARTTLMIKNIPNKYTSKMLLAAIDENH 3
           +RTTLMIKNIPNKYTSKMLLAAIDENH
Sbjct: 650 SRTTLMIKNIPNKYTSKMLLAAIDENH 676


>emb|CBI30812.3| unnamed protein product [Vitis vinifera]
          Length = 787

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/86 (65%), Positives = 68/86 (79%)
 Frame = -3

Query: 260 SARPNPMFHGDGRYLEVSPINVEVPTERGRSSRREQSASQVDNKKQFQLDLEKILKGEDA 81
           S R +PMF G+G +  ++P N+E   +RGRS   E + +Q+D+KKQFQLDL+KIL GED 
Sbjct: 563 SPRLSPMFPGNGPFPGLAPSNIEGLADRGRSRWVENNGNQIDSKKQFQLDLDKILNGEDT 622

Query: 80  RTTLMIKNIPNKYTSKMLLAAIDENH 3
           RTTLMIKNIPNKYTSKMLLAAIDE H
Sbjct: 623 RTTLMIKNIPNKYTSKMLLAAIDEYH 648


>ref|XP_002271605.1| PREDICTED: protein MEI2-like 2-like [Vitis vinifera]
          Length = 860

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/86 (65%), Positives = 68/86 (79%)
 Frame = -3

Query: 260 SARPNPMFHGDGRYLEVSPINVEVPTERGRSSRREQSASQVDNKKQFQLDLEKILKGEDA 81
           S R +PMF G+G +  ++P N+E   +RGRS   E + +Q+D+KKQFQLDL+KIL GED 
Sbjct: 636 SPRLSPMFPGNGPFPGLAPSNIEGLADRGRSRWVENNGNQIDSKKQFQLDLDKILNGEDT 695

Query: 80  RTTLMIKNIPNKYTSKMLLAAIDENH 3
           RTTLMIKNIPNKYTSKMLLAAIDE H
Sbjct: 696 RTTLMIKNIPNKYTSKMLLAAIDEYH 721


>ref|XP_002306739.1| predicted protein [Populus trichocarpa] gi|222856188|gb|EEE93735.1|
           predicted protein [Populus trichocarpa]
          Length = 741

 Score =  110 bits (276), Expect = 9e-23
 Identities = 58/84 (69%), Positives = 63/84 (75%)
 Frame = -3

Query: 254 RPNPMFHGDGRYLEVSPINVEVPTERGRSSRREQSASQVDNKKQFQLDLEKILKGEDART 75
           R NPMF G G Y     I  E   ER RS R E S SQ+D+KKQ+QLDL+KI+ GED RT
Sbjct: 523 RHNPMFFGAGSYSGPGTIGNEGFAERVRSRRVENSGSQIDSKKQYQLDLDKIISGEDNRT 582

Query: 74  TLMIKNIPNKYTSKMLLAAIDENH 3
           TLMIKNIPNKYTSKMLLAAIDENH
Sbjct: 583 TLMIKNIPNKYTSKMLLAAIDENH 606


>ref|XP_002519750.1| RNA-binding protein, putative [Ricinus communis]
           gi|223541167|gb|EEF42723.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 723

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/86 (63%), Positives = 67/86 (77%)
 Frame = -3

Query: 260 SARPNPMFHGDGRYLEVSPINVEVPTERGRSSRREQSASQVDNKKQFQLDLEKILKGEDA 81
           S R +P+F G+  Y  V+P  +E  T+RGRS R E + +Q D++KQFQLDL+KI+ GED 
Sbjct: 499 SPRLSPVFLGNAPYPGVAPTAIEGFTDRGRSRRVESNGNQADSRKQFQLDLDKIISGEDT 558

Query: 80  RTTLMIKNIPNKYTSKMLLAAIDENH 3
           RTTLMIKNIPNKYTS MLLAAIDENH
Sbjct: 559 RTTLMIKNIPNKYTSNMLLAAIDENH 584


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