BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012196
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin...   137   7e-31
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu...   125   4e-27
ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]   122   4e-26
ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   120   9e-26

>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
           vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
           product [Vitis vinifera]
          Length = 450

 Score =  137 bits (346), Expect = 7e-31
 Identities = 77/162 (47%), Positives = 94/162 (58%), Gaps = 22/162 (13%)
 Frame = +3

Query: 48  YMRNRACKFGKGCKFHHPQLDSAVSV---NGQFSFGFPTSSVISTAA-----GLPTGPLP 203
           YMR   CKFG  CKFHHPQ  SA +V    G  +FG   SS++ ++      GLP   LP
Sbjct: 143 YMRTGLCKFGAACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLP 202

Query: 204 ESTYMSAPPHSSAPQTYMPVIYPPSQGMVPI---DTYMCNFSPAPFTNVYG--------- 347
            + Y+  P     PQTYMP++  PSQG+VP    +TYM N SP   T + G         
Sbjct: 203 RAPYIPGP-RMQGPQTYMPIVLSPSQGIVPAQGWNTYMGNMSPISSTGILGSNLVYNSRN 261

Query: 348 --HSGFSGQITPSPSEVSHLPERPDKPECRYFMNTGSCKYGS 467
              SG SGQ+    S + HLPERPD+PECRYFM+TGSCKYGS
Sbjct: 262 QSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKYGS 303


>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
           gi|223531614|gb|EEF33442.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 456

 Score =  125 bits (314), Expect = 4e-27
 Identities = 73/162 (45%), Positives = 92/162 (56%), Gaps = 22/162 (13%)
 Frame = +3

Query: 48  YMRNRACKFGKGCKFHHPQ---LDSAVSVNGQFSFGFPTSSVISTAA-----GLPTGPLP 203
           YMR  +CKFG  CKFHHPQ   L + +   G  + G   SS + ++      GLPT  LP
Sbjct: 150 YMRTGSCKFGVACKFHHPQPAPLGTGLPFTGPAASGPMASSNLPSSGLPYVGGLPTWSLP 209

Query: 204 ESTYMSAPPHSSAPQTYMPVIYPPSQGMVPI---DTYMCNFSPAPFTNVYG--------- 347
            + Y+S P     PQTYMP +  PSQG+V     +TY+ N SP    +V G         
Sbjct: 210 RAPYVSGP-RLQGPQTYMPAVLSPSQGVVAAQGWNTYVGNLSPMSSGSVLGSSIVYNSRN 268

Query: 348 --HSGFSGQITPSPSEVSHLPERPDKPECRYFMNTGSCKYGS 467
              SG SGQ+    +  S+LPERPD+PECRYFMNTG+CKYGS
Sbjct: 269 QSESGSSGQVHMLSTTSSNLPERPDQPECRYFMNTGTCKYGS 310


>ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|222844581|gb|EEE82128.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  123 bits (308), Expect = 2e-26
 Identities = 66/162 (40%), Positives = 96/162 (59%), Gaps = 22/162 (13%)
 Frame = +3

Query: 48  YMRNRACKFGKGCKFHHPQ---LDSAVSVNGQFSFGFPTSSVISTAA-----GLPTGPLP 203
           YMR R+CKFG  CKFHHPQ   L +++ + G  +FG   S ++ ++      GLPT  LP
Sbjct: 145 YMRTRSCKFGVACKFHHPQPASLGTSLPLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLP 204

Query: 204 ESTYMSAPPHSSAPQTYMPVIYPPSQGMVPI---DTYMCNFSPAPFTNV----------- 341
            +    +  H   PQ YMPV+  PSQG+VP+   +TY+ N +P   +++           
Sbjct: 205 RAPPYMSGTHLQGPQAYMPVVVSPSQGIVPVPGWNTYVGNSNPMSSSSILGSNRAYDSRN 264

Query: 342 YGHSGFSGQITPSPSEVSHLPERPDKPECRYFMNTGSCKYGS 467
           +G SG SG +  +   +  LPERPD+PECR+FM++G+CKYGS
Sbjct: 265 HGDSGSSGHLLSTA--IPALPERPDQPECRHFMSSGTCKYGS 304


>emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
          Length = 460

 Score =  122 bits (305), Expect = 4e-26
 Identities = 77/193 (39%), Positives = 95/193 (49%), Gaps = 53/193 (27%)
 Frame = +3

Query: 48  YMRNRACKFGKGCKFHHPQLDSAVSV---NGQFSFGFPTSSVISTAA-----GLPTGPLP 203
           YMR   CKFG  CKFHHPQ  SA +V    G  +FG   SS++ ++      GLP   LP
Sbjct: 122 YMRTGLCKFGAACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLP 181

Query: 204 ESTYMSAPPHSSAPQTYMPVIYPPSQGMVPI---DTYMCNF------------------- 317
            + Y+  P     PQTYMP++  PSQG+VP    +TYM +F                   
Sbjct: 182 RAPYIPGP-RMQGPQTYMPIVLSPSQGIVPAQGWNTYMPHFLVLMKSFHVVNLVYSIDPN 240

Query: 318 ------------SPAPFTNVYG-----------HSGFSGQITPSPSEVSHLPERPDKPEC 428
                       SP   T + G            SG SGQ+    S + HLPERPD+PEC
Sbjct: 241 EFVICEIPRGNMSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQPEC 300

Query: 429 RYFMNTGSCKYGS 467
           RYFM+TGSCKYGS
Sbjct: 301 RYFMSTGSCKYGS 313


>ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 3-like [Vitis vinifera]
          Length = 324

 Score =  120 bits (302), Expect = 9e-26
 Identities = 68/162 (41%), Positives = 87/162 (53%), Gaps = 22/162 (13%)
 Frame = +3

Query: 48  YMRNRACKFGKGCKFHHPQ---LDSAVSVNGQFSFG-----FPTSSVISTAAGLPTGPLP 203
           YMR   CKFG  CKFHH Q   + + + V G  +FG        SS +S   G+P   LP
Sbjct: 81  YMRTGLCKFGVACKFHHLQPASIGTVLPVTGSVAFGSTGISITPSSGLSYVGGIPAWLLP 140

Query: 204 ESTYMSAPPHSSAPQTYMPVIYPPSQGMVPI---DTYMCNFSPAPFTNVYG--------- 347
            + YM  P     PQTYMP++  PSQG++P    +TYM N SP   T++ G         
Sbjct: 141 RAPYMPGP-RMQGPQTYMPIVLSPSQGIIPAQGWNTYMGNMSPISSTSILGSNLVYNTKN 199

Query: 348 --HSGFSGQITPSPSEVSHLPERPDKPECRYFMNTGSCKYGS 467
              S  +GQ+      + HLPER D+PEC YFM+TGSCKY S
Sbjct: 200 PSESSSNGQVHLLSLSIPHLPERRDQPECXYFMSTGSCKYDS 241