BLASTX nr result

ID: Bupleurum21_contig00012182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012182
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...   244   7e-63
ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   244   7e-63
ref|XP_002301105.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62
emb|CBI19316.3| unnamed protein product [Vitis vinifera]              241   3e-62
ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   241   3e-62

>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 552

 Score =  244 bits (622), Expect = 7e-63
 Identities = 123/146 (84%), Positives = 128/146 (87%)
 Frame = -1

Query: 440 TPVEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW 261
           TPVEMREKLAIPEAEWPRAI ELC LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW
Sbjct: 114 TPVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW 173

Query: 260 MSKTSGVPASDLSEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXX 81
           MSKTSG+P S++ +HRFLLYNNDATQHIFEVSAGLDSLVLGEGQILA             
Sbjct: 174 MSKTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVA 233

Query: 80  GFGRNISGLFKHAITVGKRVRSELNI 3
           GFGRNISGLFKHAITVGKRVR+E NI
Sbjct: 234 GFGRNISGLFKHAITVGKRVRTETNI 259


>ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Cucumis
           sativus] gi|2495155|sp|P93111.1|HEM11_CUCSA RecName:
           Full=Glutamyl-tRNA reductase 1, chloroplastic;
           Short=GluTR; Flags: Precursor gi|1694926|dbj|BAA08910.1|
           glutamyl-tRNA reductase [Cucumis sativus]
          Length = 552

 Score =  244 bits (622), Expect = 7e-63
 Identities = 123/146 (84%), Positives = 128/146 (87%)
 Frame = -1

Query: 440 TPVEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW 261
           TPVEMREKLAIPEAEWPRAI ELC LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW
Sbjct: 114 TPVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW 173

Query: 260 MSKTSGVPASDLSEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXX 81
           MSKTSG+P S++ +HRFLLYNNDATQHIFEVSAGLDSLVLGEGQILA             
Sbjct: 174 MSKTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVA 233

Query: 80  GFGRNISGLFKHAITVGKRVRSELNI 3
           GFGRNISGLFKHAITVGKRVR+E NI
Sbjct: 234 GFGRNISGLFKHAITVGKRVRTETNI 259


>ref|XP_002301105.1| predicted protein [Populus trichocarpa] gi|222842831|gb|EEE80378.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  243 bits (619), Expect = 2e-62
 Identities = 123/145 (84%), Positives = 127/145 (87%)
 Frame = -1

Query: 437 PVEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWM 258
           PVEMREKLAIPEAEWPRAI ELC LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWM
Sbjct: 33  PVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWM 92

Query: 257 SKTSGVPASDLSEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXXG 78
           SKTSGVP S++ EHRFLLYNNDATQH+FEVSAGLDSLVLGEGQILA             G
Sbjct: 93  SKTSGVPVSEICEHRFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKGGQGVVG 152

Query: 77  FGRNISGLFKHAITVGKRVRSELNI 3
           FGRNISGLFKHAITVGKRVR+E NI
Sbjct: 153 FGRNISGLFKHAITVGKRVRTETNI 177


>emb|CBI19316.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score =  241 bits (616), Expect = 3e-62
 Identities = 123/146 (84%), Positives = 127/146 (86%)
 Frame = -1

Query: 440 TPVEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW 261
           TPVEMREKLAIPEAEWPRAI ELC+LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW
Sbjct: 107 TPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW 166

Query: 260 MSKTSGVPASDLSEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXX 81
           MSKTSGVP S+L  HRFLLYN DATQH+FEVSAGLDSLVLGEGQILA             
Sbjct: 167 MSKTSGVPVSELCHHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVV 226

Query: 80  GFGRNISGLFKHAITVGKRVRSELNI 3
           GFGRNISGLFKHAITVGKRVR+E NI
Sbjct: 227 GFGRNISGLFKHAITVGKRVRTETNI 252


>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis
           vinifera] gi|147816412|emb|CAN77439.1| hypothetical
           protein VITISV_007402 [Vitis vinifera]
          Length = 545

 Score =  241 bits (616), Expect = 3e-62
 Identities = 123/146 (84%), Positives = 127/146 (86%)
 Frame = -1

Query: 440 TPVEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW 261
           TPVEMREKLAIPEAEWPRAI ELC+LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW
Sbjct: 107 TPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEW 166

Query: 260 MSKTSGVPASDLSEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXX 81
           MSKTSGVP S+L  HRFLLYN DATQH+FEVSAGLDSLVLGEGQILA             
Sbjct: 167 MSKTSGVPVSELCHHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVV 226

Query: 80  GFGRNISGLFKHAITVGKRVRSELNI 3
           GFGRNISGLFKHAITVGKRVR+E NI
Sbjct: 227 GFGRNISGLFKHAITVGKRVRTETNI 252


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