BLASTX nr result

ID: Bupleurum21_contig00012169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012169
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25599.3| unnamed protein product [Vitis vinifera]              211   9e-53
ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3...   211   9e-53
ref|XP_002285407.2| PREDICTED: homeobox protein knotted-1-like 3...   208   5e-52
ref|XP_004145519.1| PREDICTED: homeobox protein knotted-1-like 3...   206   2e-51
gb|AAD09582.1| homeobox 1 protein, partial [Solanum lycopersicum]     205   4e-51

>emb|CBI25599.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  211 bits (536), Expect = 9e-53
 Identities = 118/191 (61%), Positives = 133/191 (69%)
 Frame = -3

Query: 575 NSDDNQDKKLHRMSADVDDFGEGRDWQNAKCKADILSHPLFDQLLSAHVSCLRIATPVDQ 396
           N  +NQ++  +    D+ D   G +W+NA+ KADIL+HPL++QLLSAHVSCLRIATPVDQ
Sbjct: 114 NGGNNQNRGDNN-GEDMLDCDSGGNWENARYKADILAHPLYEQLLSAHVSCLRIATPVDQ 172

Query: 395 LPRIDAQLARSQHVIDKYSXXXXXXXXXXXXXXXXXXQFMTHYVILLSSFKEQLQQHVRV 216
           LPRIDAQLA+SQ V+ KYS                  QFMTHYV+LL SFKEQLQQHVRV
Sbjct: 173 LPRIDAQLAQSQGVVTKYS-----VLANQPLDDKELDQFMTHYVLLLCSFKEQLQQHVRV 227

Query: 215 HAMEAVMACWELEQSLQSLTGVSPXXXXXXXXXXXXXXXXXXXTNLFDGSLDGQDSMSMG 36
           HAMEAVMACWELEQSLQSLTGVSP                    NLFDGSLDG D  SMG
Sbjct: 228 HAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDEDDQADSEINLFDGSLDGPD--SMG 285

Query: 35  FGPLVPTESER 3
           FGPLVPTE+ER
Sbjct: 286 FGPLVPTETER 296


>ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3 [Vitis vinifera]
          Length = 430

 Score =  211 bits (536), Expect = 9e-53
 Identities = 118/191 (61%), Positives = 133/191 (69%)
 Frame = -3

Query: 575 NSDDNQDKKLHRMSADVDDFGEGRDWQNAKCKADILSHPLFDQLLSAHVSCLRIATPVDQ 396
           N  +NQ++  +    D+ D   G +W+NA+ KADIL+HPL++QLLSAHVSCLRIATPVDQ
Sbjct: 142 NGGNNQNRGDNN-GEDMLDCDSGGNWENARYKADILAHPLYEQLLSAHVSCLRIATPVDQ 200

Query: 395 LPRIDAQLARSQHVIDKYSXXXXXXXXXXXXXXXXXXQFMTHYVILLSSFKEQLQQHVRV 216
           LPRIDAQLA+SQ V+ KYS                  QFMTHYV+LL SFKEQLQQHVRV
Sbjct: 201 LPRIDAQLAQSQGVVTKYS-----VLANQPLDDKELDQFMTHYVLLLCSFKEQLQQHVRV 255

Query: 215 HAMEAVMACWELEQSLQSLTGVSPXXXXXXXXXXXXXXXXXXXTNLFDGSLDGQDSMSMG 36
           HAMEAVMACWELEQSLQSLTGVSP                    NLFDGSLDG D  SMG
Sbjct: 256 HAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDEDDQADSEINLFDGSLDGPD--SMG 313

Query: 35  FGPLVPTESER 3
           FGPLVPTE+ER
Sbjct: 314 FGPLVPTETER 324


>ref|XP_002285407.2| PREDICTED: homeobox protein knotted-1-like 3-like [Vitis vinifera]
          Length = 415

 Score =  208 bits (530), Expect = 5e-52
 Identities = 115/194 (59%), Positives = 137/194 (70%), Gaps = 3/194 (1%)
 Frame = -3

Query: 575 NSDDNQDKKLHRMS--ADVDDFGE-GRDWQNAKCKADILSHPLFDQLLSAHVSCLRIATP 405
           N+ +N + K++     A++ + G+   +WQNA+ KA+IL+HPL++QLLS+HV+CLRIATP
Sbjct: 119 NNSNNSNVKVNNSGNGAEIAESGDVAVNWQNARQKAEILAHPLYEQLLSSHVACLRIATP 178

Query: 404 VDQLPRIDAQLARSQHVIDKYSXXXXXXXXXXXXXXXXXXQFMTHYVILLSSFKEQLQQH 225
           VDQLPRIDAQLA+SQHV+ KYS                  QFMTHYV+LL SFKEQLQQH
Sbjct: 179 VDQLPRIDAQLAQSQHVVSKYS-ALGHGNSQMLGDEKELDQFMTHYVLLLCSFKEQLQQH 237

Query: 224 VRVHAMEAVMACWELEQSLQSLTGVSPXXXXXXXXXXXXXXXXXXXTNLFDGSLDGQDSM 45
           VRVHAMEAVMACWE+EQSLQSLTGVSP                    NLFDGSL+G D  
Sbjct: 238 VRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDEEDQIDSDANLFDGSLEGAD-- 295

Query: 44  SMGFGPLVPTESER 3
           SMGFGPLVPTESER
Sbjct: 296 SMGFGPLVPTESER 309


>ref|XP_004145519.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
           gi|449485171|ref|XP_004157089.1| PREDICTED: homeobox
           protein knotted-1-like 3-like [Cucumis sativus]
          Length = 455

 Score =  206 bits (525), Expect = 2e-51
 Identities = 112/196 (57%), Positives = 134/196 (68%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578 MNSDDNQDKKLHRMSADVDDFGEGRD----WQNAKCKADILSHPLFDQLLSAHVSCLRIA 411
           + +D N    L++    V + G G +    WQ+A+ KA+IL+HPL++QLLSAHV+CLRIA
Sbjct: 156 LKNDANSGDGLNKSEGMVMEPGAGGEGVLNWQHARYKAEILAHPLYEQLLSAHVACLRIA 215

Query: 410 TPVDQLPRIDAQLARSQHVIDKYSXXXXXXXXXXXXXXXXXXQFMTHYVILLSSFKEQLQ 231
           TPVDQLPRIDAQLA+SQ+V+ KYS                  QFMTHYV+LL SFKEQLQ
Sbjct: 216 TPVDQLPRIDAQLAQSQNVVAKYSALGHSAPPSMVGDDKELDQFMTHYVLLLCSFKEQLQ 275

Query: 230 QHVRVHAMEAVMACWELEQSLQSLTGVSPXXXXXXXXXXXXXXXXXXXTNLFDGSLDGQD 51
           QHVRVHAMEAVMACW++EQSLQSLTGVSP                    N+FDGSLDG D
Sbjct: 276 QHVRVHAMEAVMACWDIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDANVFDGSLDGPD 335

Query: 50  SMSMGFGPLVPTESER 3
             +MGFGPL+PTESER
Sbjct: 336 --TMGFGPLIPTESER 349


>gb|AAD09582.1| homeobox 1 protein, partial [Solanum lycopersicum]
          Length = 392

 Score =  205 bits (522), Expect = 4e-51
 Identities = 112/170 (65%), Positives = 120/170 (70%)
 Frame = -3

Query: 512 EGRDWQNAKCKADILSHPLFDQLLSAHVSCLRIATPVDQLPRIDAQLARSQHVIDKYSXX 333
           E   W+  KCKADIL+HPL+DQLLSAHVSCLRIATPVDQLPRIDAQLA+SQ+V+ KYS  
Sbjct: 116 EENSWEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYS-- 173

Query: 332 XXXXXXXXXXXXXXXXQFMTHYVILLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTG 153
                           QFMTHYV+LLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTG
Sbjct: 174 -VLGQGQPPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTG 232

Query: 152 VSPXXXXXXXXXXXXXXXXXXXTNLFDGSLDGQDSMSMGFGPLVPTESER 3
           V+P                   TN  DG  DG D  SMGFGPLVPTESER
Sbjct: 233 VAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPD--SMGFGPLVPTESER 280


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