BLASTX nr result

ID: Bupleurum21_contig00012132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012132
         (1281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528288.1| conserved hypothetical protein [Ricinus comm...   482   e-134
ref|XP_002316445.1| predicted protein [Populus trichocarpa] gi|2...   471   e-130
gb|ABK93128.1| unknown [Populus trichocarpa]                          466   e-129
ref|XP_002275416.1| PREDICTED: uncharacterized protein LOC100250...   465   e-128
ref|XP_003546222.1| PREDICTED: uncharacterized protein LOC100789...   456   e-126

>ref|XP_002528288.1| conserved hypothetical protein [Ricinus communis]
            gi|223532288|gb|EEF34090.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 421

 Score =  482 bits (1241), Expect = e-134
 Identities = 236/361 (65%), Positives = 290/361 (80%), Gaps = 2/361 (0%)
 Frame = -2

Query: 1079 MGMDPRQIVAGVLTVTMFVMLGNMIRREHFHDFSPPLPLLQMKNQESTSDGTQAASEHII 900
            MG+D RQ++AG+LT+TMFVMLGNMI+R+HF       P             +   +EH +
Sbjct: 1    MGVDLRQVIAGILTLTMFVMLGNMIKRDHFDSVEEKFP----GGATDVEFDSGKVTEHGL 56

Query: 899  ETLPKESDGPWKEDVLDLKPCWTKPVLEGTEQSQGFVTFSLTNGPEYHVSQIADAVAVAR 720
             T  K ++GPW ED  +LKPCW+K   +  EQS+GFVTFSLTNGPEYH+SQIADAV VAR
Sbjct: 57   VTFAKSTNGPWIEDAQELKPCWSKSNFDEVEQSKGFVTFSLTNGPEYHISQIADAVVVAR 116

Query: 719  YLRATLVVPDIRGSKPGDTRNFEDIYDVEKFIKNLDGVVKVVKYQPDNISAKNLEVLRVP 540
            YL AT+V+PDIRG+KPGD R FE+IYDVEKF+++LDGVVKVVKY PD+IS ++  V++VP
Sbjct: 117  YLGATIVLPDIRGNKPGDERKFEEIYDVEKFVQSLDGVVKVVKYLPDDISIRDFAVVKVP 176

Query: 539  NRVTDDHIAEKIEPVFREKGNIRLATYFPSVNMKKI--DNDINSVSCLAMFGTLELQSEV 366
            NRVT+DHI++ IE +F+ KGNIRLATYFPSVNM+K    +  +SV+CLAMFG+LELQ ++
Sbjct: 177  NRVTEDHISKSIEQIFKRKGNIRLATYFPSVNMRKTAQKSSSDSVACLAMFGSLELQPDI 236

Query: 365  QEVVDSMVERLRTLSRKSDGQFIAVDLRADILEKKGCQGNDVTGSKRCYSPQEIAIFLRK 186
             EVVDSM+ERLRTLSRKS G+FI+VDLR +ILEKK C G+   G+K CYS QEIA+FLRK
Sbjct: 237  NEVVDSMIERLRTLSRKSGGRFISVDLRVEILEKKSCHGSGGGGAKTCYSAQEIALFLRK 296

Query: 185  VGFNKDTAIYLTQSRWDDSLNVLKELFPKTYTKEGIMPADKKPKFLNWDASEFEKVIDFY 6
            +GF+KDTAIYLTQSRWDDSLNVLK++FPKTYTKE IMP DKK KFL  + SEFEKVIDFY
Sbjct: 297  IGFDKDTAIYLTQSRWDDSLNVLKDIFPKTYTKESIMPEDKKTKFLQSEDSEFEKVIDFY 356

Query: 5    I 3
            +
Sbjct: 357  M 357


>ref|XP_002316445.1| predicted protein [Populus trichocarpa] gi|222865485|gb|EEF02616.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  471 bits (1212), Expect = e-130
 Identities = 236/361 (65%), Positives = 289/361 (80%), Gaps = 2/361 (0%)
 Frame = -2

Query: 1079 MGMDPRQIVAGVLTVTMFVMLGNMIRREHFHDFSPPLPLLQMKNQESTSDGTQAASEHII 900
            MG+D RQ+VAGVLT+TMFVMLGNMI+R+HF       P      ++   DG + + + ++
Sbjct: 1    MGVDLRQVVAGVLTLTMFVMLGNMIKRDHFDSVEGKFP----GARDVEFDGEKVSEQGLV 56

Query: 899  ETLPKESDGPWKEDVLDLKPCWTKPVLEGTEQSQGFVTFSLTNGPEYHVSQIADAVAVAR 720
                K ++GPW E  L+LKPCW +   +  E S+GFVTFSLTNGPEYHVSQIADAV VAR
Sbjct: 57   TFSKKSTNGPWVEGGLELKPCWKESNFDDVE-SKGFVTFSLTNGPEYHVSQIADAVVVAR 115

Query: 719  YLRATLVVPDIRGSKPGDTRNFEDIYDVEKFIKNLDGVVKVVKYQPDNISAKNLEVLRVP 540
            Y+ ATLV+PDIRG+KPGD R FE+IYDVEKF+K+L GVVKVVK  P+++S ++  V++VP
Sbjct: 116  YIGATLVLPDIRGNKPGDERKFEEIYDVEKFVKSLVGVVKVVKRLPEDVSIRDFAVVKVP 175

Query: 539  NRVTDDHIAEKIEPVFREKGNIRLATYFPSVNMKKIDNDI--NSVSCLAMFGTLELQSEV 366
            NRV++DHIAE+IEPVFR   NIRLAT+FPSVNM+K       +SV+CLAMFGTLELQ EV
Sbjct: 176  NRVSEDHIAEQIEPVFRTNSNIRLATFFPSVNMRKTTKTSASDSVACLAMFGTLELQPEV 235

Query: 365  QEVVDSMVERLRTLSRKSDGQFIAVDLRADILEKKGCQGNDVTGSKRCYSPQEIAIFLRK 186
             EVVDSM+ERLRTLSRKSDG+FIAVDLR +IL+KKGC G+  TG+K C+S QEIAIFLRK
Sbjct: 236  NEVVDSMIERLRTLSRKSDGRFIAVDLRVEILDKKGCHGSSATGTKSCFSAQEIAIFLRK 295

Query: 185  VGFNKDTAIYLTQSRWDDSLNVLKELFPKTYTKEGIMPADKKPKFLNWDASEFEKVIDFY 6
            +GF KDT IYLTQ RWD+SL+VLK++FPKTYTKE I+PADKK KFL  + SEFEKVIDFY
Sbjct: 296  IGFGKDTTIYLTQPRWDESLDVLKDIFPKTYTKESILPADKKAKFLESEDSEFEKVIDFY 355

Query: 5    I 3
            +
Sbjct: 356  M 356


>gb|ABK93128.1| unknown [Populus trichocarpa]
          Length = 421

 Score =  466 bits (1198), Expect = e-129
 Identities = 233/361 (64%), Positives = 288/361 (79%), Gaps = 2/361 (0%)
 Frame = -2

Query: 1079 MGMDPRQIVAGVLTVTMFVMLGNMIRREHFHDFSPPLPLLQMKNQESTSDGTQAASEHII 900
            MG+D RQ+VAGVLT+TMFVMLGNMI+R+HF       P ++    +   D  + + + ++
Sbjct: 1    MGVDLRQVVAGVLTLTMFVMLGNMIKRDHFDSVEGKFPGVR----DVEFDSEKVSDQGLV 56

Query: 899  ETLPKESDGPWKEDVLDLKPCWTKPVLEGTEQSQGFVTFSLTNGPEYHVSQIADAVAVAR 720
                K ++GPW E   +LKPCW +  L+  E  +GFVT SLTNGPEYHVSQIADAV VAR
Sbjct: 57   TFSKKSTNGPWIESGQELKPCWKESTLDEVEP-KGFVTLSLTNGPEYHVSQIADAVVVAR 115

Query: 719  YLRATLVVPDIRGSKPGDTRNFEDIYDVEKFIKNLDGVVKVVKYQPDNISAKNLEVLRVP 540
            Y+ ATLV+PDIRGSKPGD R FE+IYDV+KF+K+LDGVVKVVK  PD++S ++  V++VP
Sbjct: 116  YIGATLVLPDIRGSKPGDERKFEEIYDVDKFVKSLDGVVKVVKGLPDDVSIRDFAVVKVP 175

Query: 539  NRVTDDHIAEKIEPVFREKGNIRLATYFPSVNMKKIDNDI--NSVSCLAMFGTLELQSEV 366
            NR++DDHIAE+I+PVF+   NIRLAT+FPSVNM+K       +SV+CLAMFGTL+LQ EV
Sbjct: 176  NRISDDHIAEQIKPVFKTNSNIRLATFFPSVNMRKTTKTSASDSVACLAMFGTLQLQPEV 235

Query: 365  QEVVDSMVERLRTLSRKSDGQFIAVDLRADILEKKGCQGNDVTGSKRCYSPQEIAIFLRK 186
             EVVDSM+ERLRTLSRKS+GQFIAVDLR +ILEKKGC G+   G+K C+S QEIAIFLRK
Sbjct: 236  NEVVDSMIERLRTLSRKSNGQFIAVDLRVEILEKKGCHGSSSAGTKSCFSAQEIAIFLRK 295

Query: 185  VGFNKDTAIYLTQSRWDDSLNVLKELFPKTYTKEGIMPADKKPKFLNWDASEFEKVIDFY 6
            +GF+KDT IYLTQ RWD+SL+VLK++FPKTYTKE IMPADKK KFL  + SEFEKVIDFY
Sbjct: 296  MGFDKDTTIYLTQPRWDESLDVLKDIFPKTYTKESIMPADKKAKFLESEDSEFEKVIDFY 355

Query: 5    I 3
            +
Sbjct: 356  M 356


>ref|XP_002275416.1| PREDICTED: uncharacterized protein LOC100250173 [Vitis vinifera]
            gi|298204801|emb|CBI25299.3| unnamed protein product
            [Vitis vinifera]
          Length = 417

 Score =  465 bits (1197), Expect = e-128
 Identities = 240/361 (66%), Positives = 281/361 (77%), Gaps = 2/361 (0%)
 Frame = -2

Query: 1079 MGMDPRQIVAGVLTVTMFVMLGNMIRREHFHDFSPPLPLLQMKNQESTSDGTQAASEHII 900
            MG+DPRQI+AG LTVTMFVML NMI+REHF     P             D   A  + + 
Sbjct: 1    MGVDPRQILAGFLTVTMFVMLANMIKREHFDSVKTPAAA------NIRLDENPAVEQSLA 54

Query: 899  ETLPKESDGPWKEDVL-DLKPCWTKPVLEGTEQSQGFVTFSLTNGPEYHVSQIADAVAVA 723
            +     + GPWKED   +LKPCW KP L  +E+S GFVTFSLTNGPEYHVSQIADAV VA
Sbjct: 55   KLPGGTTTGPWKEDEWQELKPCWAKPDLGNSEKSTGFVTFSLTNGPEYHVSQIADAVVVA 114

Query: 722  RYLRATLVVPDIRGSKPGDTRNFEDIYDVEKFIKNLDGVVKVVKYQPDNISAKNLEVLRV 543
            RYL ATLVVPDIRGSK GD R+FE+IYDVEKF+K+L+GVV+V K QP  +SA+N+ V+RV
Sbjct: 115  RYLGATLVVPDIRGSKRGDKRDFEEIYDVEKFMKSLEGVVRVTKDQPAELSAQNIAVVRV 174

Query: 542  PNRVTDDHIAEKIEPVFREKGNIRLATYFPSVNMKKI-DNDINSVSCLAMFGTLELQSEV 366
            PNRVT++H+ E I P+FR KGN+RLATYFPSVNMK+I  +  +SV+CLAMFG LELQ EV
Sbjct: 175  PNRVTEEHVEEYIAPIFRTKGNVRLATYFPSVNMKEITKSKADSVACLAMFGALELQPEV 234

Query: 365  QEVVDSMVERLRTLSRKSDGQFIAVDLRADILEKKGCQGNDVTGSKRCYSPQEIAIFLRK 186
            +EVVDSMVERLRTLSRKSDGQFIAVDLR +ILEKKGC G D  G+K CY P EI+ FL+K
Sbjct: 235  REVVDSMVERLRTLSRKSDGQFIAVDLRVEILEKKGCLGGD--GTKTCYGPDEISAFLQK 292

Query: 185  VGFNKDTAIYLTQSRWDDSLNVLKELFPKTYTKEGIMPADKKPKFLNWDASEFEKVIDFY 6
            +GF+KD  +YLTQ+RW  SL+ LKE FPKTY KE IMPADKKPKFL+ + SEF KVIDFY
Sbjct: 293  IGFDKDATVYLTQTRWHGSLDSLKESFPKTYIKENIMPADKKPKFLDSETSEFMKVIDFY 352

Query: 5    I 3
            I
Sbjct: 353  I 353


>ref|XP_003546222.1| PREDICTED: uncharacterized protein LOC100789772 [Glycine max]
          Length = 411

 Score =  456 bits (1172), Expect = e-126
 Identities = 230/364 (63%), Positives = 286/364 (78%), Gaps = 5/364 (1%)
 Frame = -2

Query: 1079 MGMDPRQIVAGVLTVTMFVMLGNMIRREHFHDFSPPLPLLQMKNQESTSDGTQAASEHII 900
            MG+D RQ+VAGVLT+TMFVMLGNMI+R+HF +            QE    G++ A+    
Sbjct: 1    MGVDLRQVVAGVLTLTMFVMLGNMIKRDHFDN----------SLQEKLPGGSEDANFETA 50

Query: 899  E---TLPKESDGPWKEDVLDLKPCWTKPVLEGTEQSQGFVTFSLTNGPEYHVSQIADAVA 729
                T  +++ G WK DV DLKPCW KP  +  EQ+QGFVTF+LTNGPEYH+SQIADAV 
Sbjct: 51   TFDATHVRKNIGLWKGDVDDLKPCWVKPSSDDVEQTQGFVTFALTNGPEYHISQIADAVI 110

Query: 728  VARYLRATLVVPDIRGSKPGDTRNFEDIYDVEKFIKNLDGVVKVVKYQPDNISAKNLEVL 549
            VAR L ATLV+PDIRGS+PGD  NFEDIYDV+ F+K+++GVV+VVK  P  IS +N+  +
Sbjct: 111  VARNLGATLVMPDIRGSQPGDKWNFEDIYDVDVFMKSMEGVVRVVKDLPTRISTRNIAAV 170

Query: 548  RVPNRVTDDHIAEKIEPVFREKGNIRLATYFPSVNMKKI--DNDINSVSCLAMFGTLELQ 375
            +VPNRVT+D+IAE +EP++R KG+IRL TYFPS+NM+K     D +SV+CLAMFG+LELQ
Sbjct: 171  KVPNRVTEDYIAEHVEPIYRTKGSIRLGTYFPSINMRKAGKKGDTDSVACLAMFGSLELQ 230

Query: 374  SEVQEVVDSMVERLRTLSRKSDGQFIAVDLRADILEKKGCQGNDVTGSKRCYSPQEIAIF 195
             E+ EVVDSMVERLRTLSR SDGQFIAVDLR ++L KKGCQ +D+ G K CY+ QEIA+F
Sbjct: 231  PEMHEVVDSMVERLRTLSRNSDGQFIAVDLRVEMLNKKGCQNSDIDGEKSCYNAQEIAVF 290

Query: 194  LRKVGFNKDTAIYLTQSRWDDSLNVLKELFPKTYTKEGIMPADKKPKFLNWDASEFEKVI 15
            LR++GF+KDT +Y+T+SRWD SL+ LK+LFPKTYTKE IMPADKK KFL+   SEFEKVI
Sbjct: 291  LRQIGFDKDTTVYVTESRWDSSLDSLKDLFPKTYTKEAIMPADKKKKFLD---SEFEKVI 347

Query: 14   DFYI 3
            DFY+
Sbjct: 348  DFYV 351


Top