BLASTX nr result

ID: Bupleurum21_contig00012130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012130
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g...   191   3e-46
emb|CBI30344.3| unnamed protein product [Vitis vinifera]              191   5e-46
ref|XP_002881426.1| hypothetical protein ARALYDRAFT_902720 [Arab...   187   4e-45
ref|NP_850260.1| B3 domain-containing protein [Arabidopsis thali...   186   1e-44
ref|XP_002530522.1| transcription factor, putative [Ricinus comm...   185   3e-44

>ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g36080-like [Vitis
           vinifera]
          Length = 346

 Score =  191 bits (486), Expect = 3e-46
 Identities = 118/248 (47%), Positives = 142/248 (57%), Gaps = 29/248 (11%)
 Frame = -3

Query: 920 KEVMFEKPLTPSDVGRLNRLVIPKQHAEKYFPLSGGSYSVEKGILLSFKDESSGKIWQFR 741
           ++ MFEKPLTPSDVG+LNRLVIPKQHAEKYFPL G S   EKG+LLSF+DE  GK W+FR
Sbjct: 105 RQPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSG--EKGLLLSFEDEC-GKCWRFR 161

Query: 740 YSYWNSSQSYVITKGWSHFVKEKRLVAGDIIVFKRCCDRGGRFFVGWRRQ---------N 588
           YSYWNSSQSYV+TKGWS FVKEKRL AGD+++F+R      RFF+GWRR+          
Sbjct: 162 YSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRRAGPAQDNPAA 221

Query: 587 AVDMLPNNGVAESGAVWGRV----------------NYXXXXXXXXXXXXXXXXXXGHCK 456
           A  +  +     +   W RV                 Y                  G+ K
Sbjct: 222 APPVAVHTNTGNTSVGWTRVFYSAHAYPSHPHAPPLPYQPDCLHAGSVAKNQTTPVGNSK 281

Query: 455 TLRLFGVNLECRSD--EPVAADGSNHNESQA--HDYQPHYHSNEKAPVSKNHDHMQDYNF 288
            LRLFGVNLEC+ D  EP   DGS+ +      H + P  +S      S  ++HM D NF
Sbjct: 282 RLRLFGVNLECQMDESEPSTPDGSSLSSQGPVHHQFYPQAYS------SNAYNHM-DINF 334

Query: 287 STDVKQMR 264
           S DV QMR
Sbjct: 335 SRDVNQMR 342


>emb|CBI30344.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  191 bits (484), Expect = 5e-46
 Identities = 118/245 (48%), Positives = 140/245 (57%), Gaps = 29/245 (11%)
 Frame = -3

Query: 911 MFEKPLTPSDVGRLNRLVIPKQHAEKYFPLSGGSYSVEKGILLSFKDESSGKIWQFRYSY 732
           MFEKPLTPSDVG+LNRLVIPKQHAEKYFPL G S   EKG+LLSF+DE  GK W+FRYSY
Sbjct: 1   MFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSG--EKGLLLSFEDEC-GKCWRFRYSY 57

Query: 731 WNSSQSYVITKGWSHFVKEKRLVAGDIIVFKRCCDRGGRFFVGWRRQ---------NAVD 579
           WNSSQSYV+TKGWS FVKEKRL AGD+++F+R      RFF+GWRR+          A  
Sbjct: 58  WNSSQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRRAGPAQDNPAAAPP 117

Query: 578 MLPNNGVAESGAVWGRV----------------NYXXXXXXXXXXXXXXXXXXGHCKTLR 447
           +  +     +   W RV                 Y                  G+ K LR
Sbjct: 118 VAVHTNTGNTSVGWTRVFYSAHAYPSHPHAPPLPYQPDCLHAGSVAKNQTTPVGNSKRLR 177

Query: 446 LFGVNLECRSD--EPVAADGSNHNESQA--HDYQPHYHSNEKAPVSKNHDHMQDYNFSTD 279
           LFGVNLEC+ D  EP   DGS+ +      H + P  +S      S  ++HM D NFS D
Sbjct: 178 LFGVNLECQMDESEPSTPDGSSLSSQGPVHHQFYPQAYS------SNAYNHM-DINFSRD 230

Query: 278 VKQMR 264
           V QMR
Sbjct: 231 VNQMR 235


>ref|XP_002881426.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
            lyrata] gi|297327265|gb|EFH57685.1| hypothetical protein
            ARALYDRAFT_902720 [Arabidopsis lyrata subsp. lyrata]
          Length = 236

 Score =  187 bits (476), Expect = 4e-45
 Identities = 114/246 (46%), Positives = 143/246 (58%), Gaps = 11/246 (4%)
 Frame = -3

Query: 1052 MDRNSKSTHFHHLLNGQNTPLHXXXXXXXXXXXXXXXXQDIYIPKEVMFEKPLTPSDVGR 873
            +++ S   H+H L+  Q    H                 D+   KE +FEKPLTPSDVG+
Sbjct: 3    INQYSSDFHYHSLMWQQQQQHHHHQN-------------DVVEEKEALFEKPLTPSDVGK 49

Query: 872  LNRLVIPKQHAEKYFPLSGGSY-SVEKGILLSFKDESSGKIWQFRYSYWNSSQSYVITKG 696
            LNRLVIPKQHAE+YFPL+  +  +VEKG+LL F+DE  GK W+FRYSYWNSSQSYV+TKG
Sbjct: 50   LNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEE-GKPWRFRYSYWNSSQSYVLTKG 108

Query: 695  WSHFVKEKRLVAGDIIVFKRCCDRGGRFFVGWRRQ-NAVDMLPNNGVAESGAVWGRVNYX 519
            WS +VKEK L AGD+++F R    GGRFF+GWRR+ ++     +N   +S A        
Sbjct: 109  WSRYVKEKHLDAGDVVLFHRHRANGGRFFIGWRRRGDSSSSSDSNRHVQSNA-------- 160

Query: 518  XXXXXXXXXXXXXXXXXGHCKTLRLFGVNLECRSD----EPVAADGSN---HNESQAHDY 360
                             G+ KTLRLFGVN+EC+ D    EP   DGSN    N  Q H Y
Sbjct: 161  SLQYYPHAGAQAVESQRGNSKTLRLFGVNMECQLDSDWSEPSTPDGSNTYTTNHDQFHFY 220

Query: 359  --QPHY 348
              Q HY
Sbjct: 221  PQQQHY 226


>ref|NP_850260.1| B3 domain-containing protein [Arabidopsis thaliana]
           gi|75151444|sp|Q8GYJ2.1|Y2608_ARATH RecName: Full=B3
           domain-containing protein At2g36080; AltName:
           Full=Protein AUXIN RESPONSIVE FACTOR 31
           gi|26450255|dbj|BAC42244.1| putative RAV2-like DNA
           binding protein [Arabidopsis thaliana]
           gi|330254110|gb|AEC09204.1| B3 domain-containing protein
           [Arabidopsis thaliana]
          Length = 244

 Score =  186 bits (471), Expect = 1e-44
 Identities = 106/206 (51%), Positives = 130/206 (63%), Gaps = 10/206 (4%)
 Frame = -3

Query: 935 DIYIPKEVMFEKPLTPSDVGRLNRLVIPKQHAEKYFPLSGGSY-SVEKGILLSFKDESSG 759
           D+   KE +FEKPLTPSDVG+LNRLVIPKQHAE+YFPL+  +  +VEKG+LL F+DE  G
Sbjct: 29  DVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEE-G 87

Query: 758 KIWQFRYSYWNSSQSYVITKGWSHFVKEKRLVAGDIIVFKRCCDRGGRFFVGWRRQNAVD 579
           K W+FRYSYWNSSQSYV+TKGWS +VKEK L AGD+++F R    GGRFF+GWRR+    
Sbjct: 88  KPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRRR---- 143

Query: 578 MLPNNGVAESGAVWGRVNYXXXXXXXXXXXXXXXXXXGHCKTLRLFGVNLECRSD----E 411
               +  + S +     +                   G+ KTLRLFGVN+EC+ D    E
Sbjct: 144 ---GDSSSSSDSYRHVQSNASLQYYPHAGAQAVESQRGNSKTLRLFGVNMECQLDSDWSE 200

Query: 410 PVAADGSN---HNESQAHDY--QPHY 348
           P   DGSN    N  Q H Y  Q HY
Sbjct: 201 PSTPDGSNTYTTNHDQFHFYPQQQHY 226


>ref|XP_002530522.1| transcription factor, putative [Ricinus communis]
           gi|223529926|gb|EEF31854.1| transcription factor,
           putative [Ricinus communis]
          Length = 373

 Score =  185 bits (469), Expect = 3e-44
 Identities = 113/243 (46%), Positives = 138/243 (56%), Gaps = 34/243 (13%)
 Frame = -3

Query: 920 KEVMFEKPLTPSDVGRLNRLVIPKQHAEKYFPLSGGSYSVEKGILLSFKDESSGKIWQFR 741
           KE MFEKPLTPSDVG+LNRLVIPKQHAEKYFPL G S  V+KG+LLSF+DE  GK W+FR
Sbjct: 133 KEGMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDS--VDKGLLLSFEDEL-GKCWRFR 189

Query: 740 YSYWNSSQSYVITKGWSHFVKEKRLVAGDIIVFKRCCDRGGRFFVGWRRQ-----NAVDM 576
           YSYWNSSQSYV+TKGWS +VK+K+L AGD+++F+R    G R F+GWRR+     N    
Sbjct: 190 YSYWNSSQSYVLTKGWSRYVKDKQLDAGDVVLFERHRLDGERLFIGWRRRDNNHTNTSSC 249

Query: 575 LPNNGV---AESGAVWGRV----------------------NYXXXXXXXXXXXXXXXXX 471
             ++GV     SG VW RV                       Y                 
Sbjct: 250 SSSSGVMVQGSSGGVWSRVLYSQQQHQPYQLGHGANVTTRVPYQPDCLHAGSGGQNQTIP 309

Query: 470 XGHCKTLRLFGVNLECRSD--EPVAADGSNHNESQAHDYQPHY--HSNEKAPVSKNHDHM 303
            G+ K  RLFGVNLEC+ D  EP   DGS+ +    +  Q  Y  HS   +  + +  HM
Sbjct: 310 IGNSKRFRLFGVNLECQLDDSEPSTPDGSSMSSQGPNQQQQFYSSHSPYNSSSTGSQGHM 369

Query: 302 QDY 294
             Y
Sbjct: 370 VSY 372


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