BLASTX nr result

ID: Bupleurum21_contig00012129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012129
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533072.1| conserved hypothetical protein [Ricinus comm...   113   4e-23
ref|XP_002276508.1| PREDICTED: uncharacterized protein LOC100264...   108   8e-22
ref|NP_171828.1| uncharacterized protein [Arabidopsis thaliana] ...   108   1e-21
ref|XP_002321060.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_002874890.1| hypothetical protein ARALYDRAFT_490272 [Arab...   106   5e-21

>ref|XP_002533072.1| conserved hypothetical protein [Ricinus communis]
           gi|223527136|gb|EEF29311.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 600

 Score =  113 bits (282), Expect = 4e-23
 Identities = 75/196 (38%), Positives = 101/196 (51%), Gaps = 18/196 (9%)
 Frame = +2

Query: 2   ALAILDEIRQVLEMRXXXXXXXXXXXXXXXXXXXXXXXXDLAHEESSMEEVVQKSKILQQ 181
           ALAI+DE+ Q LE R                         LA +E+ M +VVQ+SKI+QQ
Sbjct: 405 ALAIIDEMHQSLEERLAAAEELKKAAEKQKLEQEEAARNALAEQEAIMGQVVQESKIIQQ 464

Query: 182 QAEENSKIREFLMDRGRVVDVLQGELSVICQDVQLMKAKFDQRIPXXXXXXXXXXXXXXX 361
           +A+ENSK+REFLMDRGRVVD LQGE+SVICQDV+L+K +FD+RIP               
Sbjct: 465 EADENSKLREFLMDRGRVVDTLQGEISVICQDVRLLKERFDERIPLSKSISSSQTSCILA 524

Query: 362 XXXXPAVNAFSDKVPEVVVSPENQKE-SLS---------NSPVNQLLREDEVP------- 490
                  +  +D VPE   + ++ K+ SL+          SP      +   P       
Sbjct: 525 SSGSSIRSIATDLVPEPRETSKSLKDRSLTPSSIDGRSPTSPTTSSFIDGRSPKSGLKEE 584

Query: 491 -STGEEFADDDWELCE 535
            + GE  +DDDWE+ E
Sbjct: 585 RTNGEVASDDDWEIFE 600


>ref|XP_002276508.1| PREDICTED: uncharacterized protein LOC100264786 [Vitis vinifera]
            gi|296086718|emb|CBI32353.3| unnamed protein product
            [Vitis vinifera]
          Length = 667

 Score =  108 bits (271), Expect = 8e-22
 Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
 Frame = +2

Query: 2    ALAILDEIRQVLEMRXXXXXXXXXXXXXXXXXXXXXXXXDLAHEESSMEEVVQKSKILQQ 181
            +L ILDE+R  LE R                         LA +E+ ME+VVQ+S +L+Q
Sbjct: 479  SLKILDEMRHALEARLAAAEEDIKAAEQVKFEKEESARKALAEQEAIMEKVVQESMMLKQ 538

Query: 182  QAEENSKIREFLMDRGRVVDVLQGELSVICQDVQLMKAKFDQRIPXXXXXXXXXXXXXXX 361
            +AEENSK++EFLMDRG +VD+LQGE+SVICQDV+ +K KFD R+P               
Sbjct: 539  EAEENSKLQEFLMDRGHIVDMLQGEISVICQDVKFLKVKFDDRVPLSQSLSSSQTSCKLA 598

Query: 362  XXXXPAVNAFSDKVPEVVVSPENQ--KESLSNSPVN----QLLREDEVPSTGEEFADDDW 523
                   +  SD VP   ++ E++  K++   + V     +   E  V    +   DD W
Sbjct: 599  SSSSSLKSMSSDPVPVPALADESETPKQASPTASVGGQSPKKSPESGVRDDDKALLDDGW 658

Query: 524  ELCENSV 544
            +L EN V
Sbjct: 659  DLFENDV 665


>ref|NP_171828.1| uncharacterized protein [Arabidopsis thaliana]
           gi|334182264|ref|NP_001184898.1| uncharacterized protein
           [Arabidopsis thaliana] gi|3850585|gb|AAC72125.1| ESTs
           gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from
           this gene [Arabidopsis thaliana]
           gi|332189433|gb|AEE27554.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332189434|gb|AEE27555.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 571

 Score =  108 bits (269), Expect = 1e-21
 Identities = 55/105 (52%), Positives = 74/105 (70%)
 Frame = +2

Query: 2   ALAILDEIRQVLEMRXXXXXXXXXXXXXXXXXXXXXXXXDLAHEESSMEEVVQKSKILQQ 181
           +LAILDE+R  LE+R                         LA +E++ME+VVQ+SK+LQQ
Sbjct: 390 SLAILDEMRGSLEIRLAAALELKKTAEKEKKDKEDSALKALAEQEANMEKVVQESKLLQQ 449

Query: 182 QAEENSKIREFLMDRGRVVDVLQGELSVICQDVQLMKAKFDQRIP 316
           +AEENSK+R+FLMDRG++VD LQGE+SVICQDV+L+K KF+ R+P
Sbjct: 450 EAEENSKLRDFLMDRGQIVDTLQGEISVICQDVKLLKEKFENRVP 494


>ref|XP_002321060.1| predicted protein [Populus trichocarpa] gi|222861833|gb|EEE99375.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score =  107 bits (267), Expect = 2e-21
 Identities = 57/105 (54%), Positives = 72/105 (68%)
 Frame = +2

Query: 2   ALAILDEIRQVLEMRXXXXXXXXXXXXXXXXXXXXXXXXDLAHEESSMEEVVQKSKILQQ 181
           ALAILDE+RQ LE R                         LA +E  ME+VVQ+SKILQ+
Sbjct: 377 ALAILDEMRQTLESRLAAAEELRKTAELEKLEKEETARNALAEQEIIMEKVVQESKILQK 436

Query: 182 QAEENSKIREFLMDRGRVVDVLQGELSVICQDVQLMKAKFDQRIP 316
           +AEEN+K++EFLMDRG VVD LQGE+SVICQDV+L+K +FD+R+P
Sbjct: 437 EAEENAKLQEFLMDRGCVVDTLQGEISVICQDVRLLKERFDERVP 481


>ref|XP_002874890.1| hypothetical protein ARALYDRAFT_490272 [Arabidopsis lyrata subsp.
           lyrata] gi|297320727|gb|EFH51149.1| hypothetical protein
           ARALYDRAFT_490272 [Arabidopsis lyrata subsp. lyrata]
          Length = 559

 Score =  106 bits (264), Expect = 5e-21
 Identities = 53/105 (50%), Positives = 72/105 (68%)
 Frame = +2

Query: 2   ALAILDEIRQVLEMRXXXXXXXXXXXXXXXXXXXXXXXXDLAHEESSMEEVVQKSKILQQ 181
           +L++LDE+R+VLE+R                          A +E+ ME+VVQ+SK+LQQ
Sbjct: 381 SLSVLDEMREVLEIRLAAALEIKNAAEQEKQEKEGSARMAFAEQEAIMEKVVQESKLLQQ 440

Query: 182 QAEENSKIREFLMDRGRVVDVLQGELSVICQDVQLMKAKFDQRIP 316
           +AEENSK+REFLMD GR+VD LQGE+SVICQD++ +K KFD R+P
Sbjct: 441 EAEENSKLREFLMDHGRIVDSLQGEISVICQDIRHLKEKFDNRVP 485


Top