BLASTX nr result

ID: Bupleurum21_contig00012123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012123
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279515.2| PREDICTED: flowering time control protein FC...   186   2e-45
emb|CBI22860.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_002316051.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002519252.1| Flowering time control protein FCA, putative...   182   3e-44
ref|XP_003529516.1| PREDICTED: flowering time control protein FC...   168   5e-40

>ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
          Length = 785

 Score =  186 bits (472), Expect = 2e-45
 Identities = 94/147 (63%), Positives = 109/147 (74%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKKQSRGCGFVKYASREMAMAAINALNGI 181
           VGSLNKQA EKEV+EIFSPYG+VEDVYLMRDE KQSRGCGFVK++ R+MAMAAINALNGI
Sbjct: 213 VGSLNKQATEKEVKEIFSPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGI 272

Query: 182 YIMRGCDQPLTVRFADPKRPRPGEXXXXXXXXXXXXXXXXQSPGVRPMPNMVENMQNHNL 361
           Y MRGCDQPLTVRFADPKRPRPGE                Q+PGVRP  N  + + +  +
Sbjct: 273 YTMRGCDQPLTVRFADPKRPRPGESRGAPAFGGPGFGPRFQAPGVRPTMNQGDPIGSGRI 332

Query: 362 -SNAWQPTIPQNQGASSDVGINSLSSR 439
             NAW+P  PQN G SS+ GI+   ++
Sbjct: 333 PPNAWRPMSPQNLGPSSNAGIHGFGNQ 359



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKK-QSRGCGFVKYASREMAMAAINALNG 178
           VGS+ + A E+++  +F  +G V +V L++D++  Q +GC F+KYA+ E A  AI AL+ 
Sbjct: 122 VGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRALHN 181

Query: 179 IYIMRGCDQPLTVRFADPKRPRPG 250
            Y + G   P+ VR+AD +R R G
Sbjct: 182 QYTLPGGVGPIQVRYADGERERLG 205


>emb|CBI22860.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  186 bits (472), Expect = 2e-45
 Identities = 94/147 (63%), Positives = 109/147 (74%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKKQSRGCGFVKYASREMAMAAINALNGI 181
           VGSLNKQA EKEV+EIFSPYG+VEDVYLMRDE KQSRGCGFVK++ R+MAMAAINALNGI
Sbjct: 136 VGSLNKQATEKEVKEIFSPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGI 195

Query: 182 YIMRGCDQPLTVRFADPKRPRPGEXXXXXXXXXXXXXXXXQSPGVRPMPNMVENMQNHNL 361
           Y MRGCDQPLTVRFADPKRPRPGE                Q+PGVRP  N  + + +  +
Sbjct: 196 YTMRGCDQPLTVRFADPKRPRPGESRGAPAFGGPGFGPRFQAPGVRPTMNQGDPIGSGRI 255

Query: 362 -SNAWQPTIPQNQGASSDVGINSLSSR 439
             NAW+P  PQN G SS+ GI+   ++
Sbjct: 256 PPNAWRPMSPQNLGPSSNAGIHGFGNQ 282



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKK-QSRGCGFVKYASREMAMAAINALNG 178
           VGS+ + A E+++  +F  +G V +V L++D++  Q +GC F+KYA+ E A  AI AL+ 
Sbjct: 45  VGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRALHN 104

Query: 179 IYIMRGCDQPLTVRFADPKRPRPG 250
            Y + G   P+ VR+AD +R R G
Sbjct: 105 QYTLPGGVGPIQVRYADGERERLG 128


>ref|XP_002316051.1| predicted protein [Populus trichocarpa] gi|222865091|gb|EEF02222.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  186 bits (471), Expect = 2e-45
 Identities = 92/147 (62%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKKQSRGCGFVKYASREMAMAAINALNGI 181
           VGSLNKQA EKEVEEIF+PYGRVEDVYLMRDE KQSRGCGFVKY+ R+MA+AAIN LNGI
Sbjct: 183 VGSLNKQATEKEVEEIFTPYGRVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINGLNGI 242

Query: 182 YIMRGCDQPLTVRFADPKRPRP-GEXXXXXXXXXXXXXXXXQSPGVRPMPNMVENMQNHN 358
           Y MRGC+QPLTVRFADPKRPRP G+                Q+ G+RP PN+ + M +H 
Sbjct: 243 YTMRGCEQPLTVRFADPKRPRPGGDSRGGPAFGSPGAGPRFQASGLRPPPNLGDPMGDHI 302

Query: 359 LSNAWQPTIPQNQGASSDVGINSLSSR 439
             NAW P  PQN G SS+ G++   ++
Sbjct: 303 PPNAWLPMSPQNMGPSSNAGVHGFGNQ 329



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKK-QSRGCGFVKYASREMAMAAINALNG 178
           VGS+ + A E ++  +F  +G V +V L++D++  Q +GC F+KYA+ E A  AI AL+ 
Sbjct: 92  VGSVPRTATEMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCFIKYATSEEADRAIRALHN 151

Query: 179 IYIMRGCDQPLTVRFADPKRPRPG 250
              + G   P+ VR+AD +R R G
Sbjct: 152 QRTLPGGVGPIQVRYADGERERLG 175


>ref|XP_002519252.1| Flowering time control protein FCA, putative [Ricinus communis]
           gi|223541567|gb|EEF43116.1| Flowering time control
           protein FCA, putative [Ricinus communis]
          Length = 811

 Score =  182 bits (462), Expect = 3e-44
 Identities = 92/146 (63%), Positives = 105/146 (71%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKKQSRGCGFVKYASREMAMAAINALNGI 181
           VGSLNKQA EKEVEEIFSPYG VEDVYLMRDE KQSRGCGFVKY+SREMA+AAINALNGI
Sbjct: 256 VGSLNKQATEKEVEEIFSPYGHVEDVYLMRDEMKQSRGCGFVKYSSREMALAAINALNGI 315

Query: 182 YIMRGCDQPLTVRFADPKRPRPGEXXXXXXXXXXXXXXXXQSPGVRPMPNMVENMQNHNL 361
           Y MRGCDQPLTVRFADPKRPRPG+                Q+PG R  PN  + + +   
Sbjct: 316 YKMRGCDQPLTVRFADPKRPRPGDSRGGPAFGGPGFGPRFQAPGPRLPPNFGDAVGDRVP 375

Query: 362 SNAWQPTIPQNQGASSDVGINSLSSR 439
            +AW+P  PQ+ G S +  I+   S+
Sbjct: 376 PSAWRPMSPQDMGPSPNAAIHGFGSQ 401



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKK-QSRGCGFVKYASREMAMAAINALNG 178
           VGS+ + A E+++  +F  +G V +V L++D++  Q +GC FVKYA+ E A  AI AL+ 
Sbjct: 165 VGSVPRTASEEDIRPLFEQHGNVIEVALIKDKRTGQQQGCCFVKYATSEEADRAIRALHN 224

Query: 179 IYIMRGCDQPLTVRFADPKRPRPG 250
            + + G   P+ VRFAD +R R G
Sbjct: 225 QHTLPGGIGPIQVRFADGERERLG 248


>ref|XP_003529516.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
          Length = 737

 Score =  168 bits (425), Expect = 5e-40
 Identities = 89/146 (60%), Positives = 101/146 (69%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKKQSRGCGFVKYASREMAMAAINALNGI 181
           VGSLNKQA  KEVEEIFS YGRVEDVYLMRDEKKQSRGCGFVKY+ R+MA+AAINALNGI
Sbjct: 181 VGSLNKQATVKEVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGI 240

Query: 182 YIMRGCDQPLTVRFADPKRPRPGEXXXXXXXXXXXXXXXXQSPGVRPMPNMVENMQNH-N 358
           Y MRGC+QPL VRFADPKRPR G+                 +PG R   N+ + M +   
Sbjct: 241 YTMRGCEQPLIVRFADPKRPRQGD-SRGLAFGGPGFGPRFDAPGTRHPSNITDPMGDRMP 299

Query: 359 LSNAWQPTIPQNQGASSDVGINSLSS 436
            SNAW P  P N G SS+ G + + S
Sbjct: 300 PSNAWHPLHPPNMGPSSNAGFHGMGS 325



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   VGSLNKQAIEKEVEEIFSPYGRVEDVYLMRDEKK-QSRGCGFVKYASREMAMAAINALNG 178
           VGS+ + A E+++  +F  +G V +V L++D+K  Q +GC F+KYA+ E A  AI AL+ 
Sbjct: 90  VGSVPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIRALHN 149

Query: 179 IYIMRGCDQPLTVRFADPKRPRPG 250
            + + G   P+ VR+AD +R R G
Sbjct: 150 QHTLPGGVGPIQVRYADGERERLG 173


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