BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012116
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communi...    50   3e-10
ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|2...    47   2e-08
emb|CBI28427.3| unnamed protein product [Vitis vinifera]               48   1e-07
ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera...    48   1e-07
ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max]    47   2e-06

>ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communis]
           gi|223530272|gb|EEF32172.1| F-box protein SNE, putative
           [Ricinus communis]
          Length = 155

 Score = 50.4 bits (119), Expect(3) = 3e-10
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = -2

Query: 511 RLDDRSLGVAASIWRLWCSVTRNDLLWELLYFRQCL 404
           RLD RSLGVAA +  LWC++ RND LWE L FR  +
Sbjct: 28  RLDGRSLGVAACVCNLWCTIARNDSLWENLCFRHVI 63



 Score = 32.3 bits (72), Expect(3) = 3e-10
 Identities = 12/19 (63%), Positives = 18/19 (94%)
 Frame = -1

Query: 359 YRKLYMLCLRSVLNRLGRR 303
           Y++LYM+C+R VL++LGRR
Sbjct: 80  YKRLYMVCVRPVLSQLGRR 98



 Score = 26.2 bits (56), Expect(3) = 3e-10
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -3

Query: 543 FSINDHVDVLID 508
           FSINDHVD+L++
Sbjct: 13  FSINDHVDILVE 24


>ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|222861964|gb|EEE99506.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 47.4 bits (111), Expect(3) = 2e-08
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -2

Query: 511 RLDDRSLGVAASIWRLWCSVTRNDLLWELLYFR 413
           RLD RSL V+A + RLWC++ RND LWE L FR
Sbjct: 27  RLDGRSLCVSACVCRLWCTIARNDSLWEHLCFR 59



 Score = 32.0 bits (71), Expect(3) = 2e-08
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = -1

Query: 359 YRKLYMLCLRSVLNRLGR 306
           Y++LYM+C+R VL+RLGR
Sbjct: 79  YKRLYMVCVRPVLSRLGR 96



 Score = 23.9 bits (50), Expect(3) = 2e-08
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 543 FSINDHVDVLID 508
           F INDHVD+L++
Sbjct: 12  FCINDHVDILLE 23


>emb|CBI28427.3| unnamed protein product [Vitis vinifera]
          Length = 1221

 Score = 47.8 bits (112), Expect(2) = 1e-07
 Identities = 24/33 (72%), Positives = 25/33 (75%)
 Frame = -2

Query: 511  RLDDRSLGVAASIWRLWCSVTRNDLLWELLYFR 413
            RLD RSLGVAA + RLW SVT ND LWE L FR
Sbjct: 1122 RLDGRSLGVAACVCRLWRSVTWNDSLWEHLCFR 1154



 Score = 33.1 bits (74), Expect(2) = 1e-07
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -1

Query: 359  YRKLYMLCLRSVLNRLGR 306
            YR+LYM+CLR VL+RLG+
Sbjct: 1173 YRRLYMMCLRPVLSRLGQ 1190


>ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera]
           gi|147772267|emb|CAN67350.1| hypothetical protein
           VITISV_018090 [Vitis vinifera]
          Length = 170

 Score = 47.8 bits (112), Expect(2) = 1e-07
 Identities = 24/33 (72%), Positives = 25/33 (75%)
 Frame = -2

Query: 511 RLDDRSLGVAASIWRLWCSVTRNDLLWELLYFR 413
           RLD RSLGVAA + RLW SVT ND LWE L FR
Sbjct: 40  RLDGRSLGVAACVCRLWRSVTWNDSLWEHLCFR 72



 Score = 33.1 bits (74), Expect(2) = 1e-07
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -1

Query: 359 YRKLYMLCLRSVLNRLGR 306
           YR+LYM+CLR VL+RLG+
Sbjct: 91  YRRLYMMCLRPVLSRLGQ 108


>ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max]
          Length = 154

 Score = 47.0 bits (110), Expect(2) = 2e-06
 Identities = 24/34 (70%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
 Frame = -2

Query: 511 RLDDRSLGVAASIWRLWCSVTRN-DLLWELLYFR 413
           RLD  SLGVAA + RLWCS+TRN D LWE L FR
Sbjct: 32  RLDGPSLGVAACVCRLWCSLTRNDDSLWEHLCFR 65



 Score = 30.0 bits (66), Expect(2) = 2e-06
 Identities = 11/17 (64%), Positives = 16/17 (94%)
 Frame = -1

Query: 359 YRKLYMLCLRSVLNRLG 309
           Y++LYM+C+R VL+RLG
Sbjct: 85  YKRLYMVCVRPVLSRLG 101