BLASTX nr result

ID: Bupleurum21_contig00012115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012115
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298376.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_002284406.1| PREDICTED: 3-hydroxyacyl-CoA dehydratase 2 [...   158   4e-37
ref|XP_004148217.1| PREDICTED: very-long-chain (3R)-3-hydroxyacy...   152   2e-35
gb|AFK41133.1| unknown [Medicago truncatula]                          150   8e-35
ref|XP_003606497.1| Protein-tyrosine phosphatase-like member B [...   150   8e-35

>ref|XP_002298376.1| predicted protein [Populus trichocarpa] gi|222845634|gb|EEE83181.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/116 (65%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   ICVLQTLAIFETIHGAIGIVPSGALMPFMQWGGRTHVVVAIANNIKEVQEFSSIFLMFVP 182
           IC+LQT++  E IHGA+G+VPSG L PFMQWGGRTH V+AI   I EVQE  S+F+ FV 
Sbjct: 48  ICLLQTVSFLEVIHGALGVVPSGVLFPFMQWGGRTHFVLAIVRQIIEVQELPSVFITFVA 107

Query: 183 WSSMEVIRYSNYALNCYNKSPYFLTYLRYTAFIVLFPIGFV-SEMWLMYEALPFIK 347
           WS  EVIRYS+YALNC    P ++TYLRYTAFIVL+PIG    EMW MY+ALPF+K
Sbjct: 108 WSMAEVIRYSHYALNCVGSCPSWITYLRYTAFIVLYPIGLAPGEMWTMYQALPFVK 163


>ref|XP_002284406.1| PREDICTED: 3-hydroxyacyl-CoA dehydratase 2 [Vitis vinifera]
           gi|297746135|emb|CBI16191.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score =  158 bits (400), Expect = 4e-37
 Identities = 71/116 (61%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   ICVLQTLAIFETIHGAIGIVPSGALMPFMQWGGRTHVVVAIANNIKEVQEFSSIFLMFVP 182
           +C+LQT++  E +HGAIG+VPSG L+P MQWGGRTH ++AI   I EVQE  S+F+ F+ 
Sbjct: 48  VCLLQTVSFLEVVHGAIGLVPSGVLLPLMQWGGRTHFLLAIVRRIVEVQELPSVFITFIA 107

Query: 183 WSSMEVIRYSNYALNCYNKSPYFLTYLRYTAFIVLFPIGFV-SEMWLMYEALPFIK 347
           WS  EVIRYS+YAL+C    P  +TYLRYTAFI+L+P+G    EMWLMY+ALPFIK
Sbjct: 108 WSISEVIRYSHYALHCMGSCPSCITYLRYTAFILLYPVGVAPGEMWLMYQALPFIK 163


>ref|XP_004148217.1| PREDICTED: very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier
           protein] dehydratase 2-like [Cucumis sativus]
           gi|449519208|ref|XP_004166627.1| PREDICTED:
           very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier
           protein] dehydratase 2-like [Cucumis sativus]
          Length = 218

 Score =  152 bits (385), Expect = 2e-35
 Identities = 66/115 (57%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   ICVLQTLAIFETIHGAIGIVPSGALMPFMQWGGRTHVVVAIANNIKEVQEFSSIFLMFVP 182
           +C LQT A  E IHGA+G+VP+G L+P MQWGGR H VVA+   + E+Q   S+F+ F+ 
Sbjct: 48  VCFLQTAAFLEVIHGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQRLPSVFITFLA 107

Query: 183 WSSMEVIRYSNYALNCYNKSPYFLTYLRYTAFIVLFPIGF-VSEMWLMYEALPFI 344
           WS  EVIRY ++ALNC    P++LTYLRYTAFI+L+PIG  + EMWLMY+A+PF+
Sbjct: 108 WSLSEVIRYFHHALNCLGVCPFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFM 162


>gb|AFK41133.1| unknown [Medicago truncatula]
          Length = 219

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/116 (59%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   ICVLQTLAIFETIHGAIGIVPSGALMPFMQWGGRTHVVVAIANNIKEVQEFSSIFLMFVP 182
           I  LQ  A  E IHGAIG+VPSGAL+P MQWGGRTH V+AI N I EVQE   +F+ F+ 
Sbjct: 49  ISFLQCAAFLEVIHGAIGLVPSGALLPLMQWGGRTHFVLAIVNGIHEVQELPPVFITFLA 108

Query: 183 WSSMEVIRYSNYALNCYNKSPYFLTYLRYTAFIVLFPIG-FVSEMWLMYEALPFIK 347
           WS  E+IRYS+YA +C    P ++TY+RYTAFIV++P+G F  E+WLMY++LP IK
Sbjct: 109 WSIGEIIRYSHYAFSCLGNCPSWITYIRYTAFIVIYPVGVFPGELWLMYQSLPIIK 164


>ref|XP_003606497.1| Protein-tyrosine phosphatase-like member B [Medicago truncatula]
           gi|355507552|gb|AES88694.1| Protein-tyrosine
           phosphatase-like member B [Medicago truncatula]
          Length = 290

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/116 (59%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   ICVLQTLAIFETIHGAIGIVPSGALMPFMQWGGRTHVVVAIANNIKEVQEFSSIFLMFVP 182
           I  LQ  A  E IHGAIG+VPSGAL+P MQWGGRTH V+AI N I EVQE   +F+ F+ 
Sbjct: 49  ISFLQCAAFLEVIHGAIGLVPSGALLPLMQWGGRTHFVLAIVNGIHEVQELPPVFITFLA 108

Query: 183 WSSMEVIRYSNYALNCYNKSPYFLTYLRYTAFIVLFPIG-FVSEMWLMYEALPFIK 347
           WS  E+IRYS+YA +C    P ++TY+RYTAFIV++P+G F  E+WLMY++LP IK
Sbjct: 109 WSIGEIIRYSHYAFSCLGNCPSWITYIRYTAFIVIYPVGVFPGELWLMYQSLPIIK 164


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