BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012113
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                210   3e-52
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                188   2e-45
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   188   2e-45
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   188   2e-45
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             186   7e-45

>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score =  210 bits (535), Expect = 3e-52
 Identities = 98/220 (44%), Positives = 138/220 (62%)
 Frame = -1

Query: 927  LISDNGKQFDCKEIRDFCEELGIKQGFSAVCHPQTNGQTEAVNXXXXXXXXXXXLDCKGD 748
            LISDNG QFD K  R +C ++GI+ G+S   +PQ N Q EA N            D KG 
Sbjct: 886  LISDNGLQFDSKAFRRYCADIGIRNGYSTPAYPQGNSQAEATNKVILAGLKKHLDDAKGR 945

Query: 747  WPEELPKVLWSYNTTPRKTTDETPFSLAYGCEAMVPVEIGAGSIRRESFEPELNEAMRRL 568
            W EELP VLW+Y TTPR++T ETPFS+ YG EA++P+E+G  +++ + +    N  M   
Sbjct: 946  WVEELPHVLWAYRTTPRRSTGETPFSMTYGMEAVIPLELGFPTLKFDQYNNVTNHDMLHD 1005

Query: 567  QLDLIEEHRDTVHERTASYKQRMARFFDKKVQTKPIKAGDLVLRRVLPNTKIAKHGVFGA 388
             L+ IEE R+    +  SY+Q++ + +DK V+++P+  GDLVLR+V+   +    G  G 
Sbjct: 1006 SLNTIEERREVASVKMGSYQQKLKQAYDKGVKSRPLVPGDLVLRKVVGTARNPAWGKLGT 1065

Query: 387  NWEGPYRVTAVLWKGTFCLADLEGRAIPRAWNAEHLRRYY 268
            NWEGPYR+T+V   G + L DL+GR + R WN  +LRRYY
Sbjct: 1066 NWEGPYRITSVAGIGAYRLEDLDGRVVHRPWNVNNLRRYY 1105


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  188 bits (477), Expect = 2e-45
 Identities = 90/220 (40%), Positives = 138/220 (62%)
 Frame = -1

Query: 927  LISDNGKQFDCKEIRDFCEELGIKQGFSAVCHPQTNGQTEAVNXXXXXXXXXXXLDCKGD 748
            ++ D+G QFDC  I+D+C E  IK   +AVCHPQ+NGQ EA N            + KG 
Sbjct: 544  IVFDHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNGQAEAANKQILLALQKKLEEHKGL 603

Query: 747  WPEELPKVLWSYNTTPRKTTDETPFSLAYGCEAMVPVEIGAGSIRRESFEPELNEAMRRL 568
            W + +P+VLW+  TT +  T ++PFSLA+G EA+VP+E+G  S R + ++PE+NE + R 
Sbjct: 604  WADLVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPIEVGLPSFRVQHYDPEVNEQLMRE 663

Query: 567  QLDLIEEHRDTVHERTASYKQRMARFFDKKVQTKPIKAGDLVLRRVLPNTKIAKHGVFGA 388
             LD + E R     + A+ K RM+R ++++V+ +P+  GDLVLRR     K   HG F A
Sbjct: 664  ALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRHRPLTEGDLVLRRTAAVGKGNVHGKFTA 723

Query: 387  NWEGPYRVTAVLWKGTFCLADLEGRAIPRAWNAEHLRRYY 268
            NWEGPY++   +  G++ L  +EG  +  ++NA+ L++Y+
Sbjct: 724  NWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNADVLKKYF 763


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  188 bits (477), Expect = 2e-45
 Identities = 95/222 (42%), Positives = 131/222 (59%), Gaps = 2/222 (0%)
 Frame = -1

Query: 927  LISDNGKQFDCKEIRDFCEELGIKQGFSAVCHPQTNGQTEAVNXXXXXXXXXXXLDCKGD 748
            +++DNG QF   +   FC +  I+   S   +PQ NGQ EA N            + KG 
Sbjct: 1565 IVTDNGTQFTSLQFEGFCAKWKIRLSKSTPRYPQCNGQAEATNKTILDGLKKRLDEKKGA 1624

Query: 747  WPEELPKVLWSYNTTPRKTTDETPFSLAYGCEAMVPVEIGAGSIRRESF--EPELNEAMR 574
            W +EL  VLWSY TTPR++TD TPFSL YG EA+ P E G  ++RR     +P LN+ M 
Sbjct: 1625 WADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCEAGLPTVRRSMLINDPTLNDQML 1684

Query: 573  RLQLDLIEEHRDTVHERTASYKQRMARFFDKKVQTKPIKAGDLVLRRVLPNTKIAKHGVF 394
               LD +EE RD    R  +Y+Q  A+F++KKV+ +    GDLVLR+V  NT     G  
Sbjct: 1685 LDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKL 1744

Query: 393  GANWEGPYRVTAVLWKGTFCLADLEGRAIPRAWNAEHLRRYY 268
            GA+WEGPY ++ V+  G + L  ++G  IPR+WN+ +L+RYY
Sbjct: 1745 GAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
            gi|323435157|ref|YP_004222375.1| hypothetical protein
            BevumaM_p142 [Beta vulgaris subsp. maritima]
            gi|346683249|ref|YP_004842181.1| hypothetical protein
            BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
            orf764 [Beta vulgaris subsp. vulgaris]
            gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
            vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
            hypothetical protein [Beta vulgaris subsp. maritima]
            gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
            vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
            hypothetical protein [Beta macrocarpa]
            gi|384977907|emb|CBL54131.1| hypothetical protein
            (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  188 bits (477), Expect = 2e-45
 Identities = 90/220 (40%), Positives = 138/220 (62%)
 Frame = -1

Query: 927  LISDNGKQFDCKEIRDFCEELGIKQGFSAVCHPQTNGQTEAVNXXXXXXXXXXXLDCKGD 748
            ++ D+G QFDC  I+D+C E  IK   +AVCHPQ+NGQ EA N            + KG 
Sbjct: 544  IVFDHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNGQAEAANKQILLALQKKLEEHKGL 603

Query: 747  WPEELPKVLWSYNTTPRKTTDETPFSLAYGCEAMVPVEIGAGSIRRESFEPELNEAMRRL 568
            W + +P+VLW+  TT +  T ++PFSLA+G EA+VP+E+G  S R + ++PE+NE + R 
Sbjct: 604  WADLVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPIEVGLPSFRVQHYDPEVNEQLMRE 663

Query: 567  QLDLIEEHRDTVHERTASYKQRMARFFDKKVQTKPIKAGDLVLRRVLPNTKIAKHGVFGA 388
             LD + E R     + A+ K RM+R ++++V+ +P+  GDLVLRR     K   HG F A
Sbjct: 664  ALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRHRPLTEGDLVLRRTAAVGKGNVHGKFTA 723

Query: 387  NWEGPYRVTAVLWKGTFCLADLEGRAIPRAWNAEHLRRYY 268
            NWEGPY++   +  G++ L  +EG  +  ++NA+ L++Y+
Sbjct: 724  NWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNADVLKKYF 763


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  186 bits (472), Expect = 7e-45
 Identities = 97/222 (43%), Positives = 124/222 (55%), Gaps = 2/222 (0%)
 Frame = -1

Query: 927  LISDNGKQFDCKEIRDFCEELGIKQGFSAVCHPQTNGQTEAVNXXXXXXXXXXXLDCKGD 748
            +++DNG QF   E   FC + GIK  +S   +PQ NGQ EA N              KG 
Sbjct: 881  IVTDNGPQFISHEFDAFCADWGIKVSYSTPRYPQGNGQAEAANKTILSNLKKRLNHLKGG 940

Query: 747  WPEELPKVLWSYNTTPRKTTDETPFSLAYGCEAMVPVEIGAGSIRRES--FEPELNEAMR 574
            W EEL  VLW+Y TTPR+ T ETPFSL YG EA+VP E+    +RR       E N AM 
Sbjct: 941  WYEELQPVLWAYRTTPRRPTGETPFSLVYGMEAVVPAELNVPGLRRTEAPLNEEENSAML 1000

Query: 573  RLQLDLIEEHRDTVHERTASYKQRMARFFDKKVQTKPIKAGDLVLRRVLPNTKIAKHGVF 394
               LD I E RD    R  +Y+Q  AR+++ KV+++P   GD VLRRV  N K    G  
Sbjct: 1001 NDSLDTINERRDQALIRIQNYQQAAARYYNSKVKSRPFFVGDYVLRRVFDNKKEEGAGKL 1060

Query: 393  GANWEGPYRVTAVLWKGTFCLADLEGRAIPRAWNAEHLRRYY 268
            G NWEGPY +T V+  G + L DLE   + R WN  +L+++Y
Sbjct: 1061 GINWEGPYIITEVVRNGVYRLKDLEDNPVKRPWNVINLKKFY 1102