BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012110
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300781.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002532367.1| ring finger protein, putative [Ricinus commu...   118   6e-25
ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like ...   105   3e-21
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...   103   1e-20
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]   103   1e-20

>ref|XP_002300781.1| predicted protein [Populus trichocarpa] gi|222842507|gb|EEE80054.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  120 bits (302), Expect = 9e-26
 Identities = 74/150 (49%), Positives = 84/150 (56%), Gaps = 15/150 (10%)
 Frame = -2

Query: 476 TRGLVGSDEDFVVIELIGEQS----------RNESR-----IHHHSPAKVQQKTVKLKPR 342
           T  L+GSDED+VVIEL GE            RN SR     +   SP K++QK  KLK R
Sbjct: 193 TDSLMGSDEDYVVIELGGEDDGALLPPRQHERNTSREVQMRLRSRSPMKMEQKLGKLKTR 252

Query: 341 KSRHASIMGDEFINVRESDDQFYIQPFRRSFSMDSAADRHTYSSLQEITSQNRQHXXXXX 162
           K  H SIMGDE I+VR  DDQF IQP RRSFS+DSA DR  YSS+Q I  QN  H     
Sbjct: 253 KQHHVSIMGDECIDVRGKDDQFSIQPLRRSFSLDSAVDRQLYSSVQAIIHQNIHHREISN 312

Query: 161 XXXXXXXXXXXXXXFGHVRGSRSSVLPIEF 72
                         F HVRGSR +V P+EF
Sbjct: 313 TEESSNRVLRSVFPFVHVRGSRKAVRPVEF 342


>ref|XP_002532367.1| ring finger protein, putative [Ricinus communis]
           gi|223527923|gb|EEF30010.1| ring finger protein,
           putative [Ricinus communis]
          Length = 345

 Score =  118 bits (295), Expect = 6e-25
 Identities = 73/148 (49%), Positives = 82/148 (55%), Gaps = 15/148 (10%)
 Frame = -2

Query: 476 TRGLVGSDEDFVVIELIGE----------QSRNESR-----IHHHSPAKVQQKTVKLKPR 342
           T  L+G DEDFVVIEL GE          Q R+ SR     +   SPAK++QK  KLKPR
Sbjct: 198 TDSLMGGDEDFVVIELGGEEEGILLPHRQQERDASRETQMQLRSQSPAKMEQKPGKLKPR 257

Query: 341 KSRHASIMGDEFINVRESDDQFYIQPFRRSFSMDSAADRHTYSSLQEITSQNRQHXXXXX 162
           K  H SIMGDE I+VRE DDQF IQP RRSFS+DSA DR  Y S+Q I  QN        
Sbjct: 258 KRHHLSIMGDECIDVREKDDQFSIQPIRRSFSLDSAVDRQLYLSVQNIIQQNTHQRGIYT 317

Query: 161 XXXXXXXXXXXXXXFGHVRGSRSSVLPI 78
                         FGH  GSR + LPI
Sbjct: 318 SEESSNRVQTSFFHFGHSVGSRKAFLPI 345


>ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera]
          Length = 351

 Score =  105 bits (263), Expect = 3e-21
 Identities = 70/152 (46%), Positives = 84/152 (55%), Gaps = 17/152 (11%)
 Frame = -2

Query: 476 TRGLVGSDEDFVVIELIG-----------EQSRNESR-----IHHHSPAKVQQKTVKLKP 345
           +  L+G D+DFVVIEL G           +Q R +SR         SP K+QQK    K 
Sbjct: 198 SEALMGGDDDFVVIELGGGDDRGVILPPRQQERADSRELLVQSRGPSPTKLQQKLENKKS 257

Query: 344 RKSRHASIMGDEFINVRESDDQFYIQPFRRSFSMDSAADRHTYSSLQE-ITSQNRQHXXX 168
           RK  + S MGDE I+VRE DDQF IQP RRSFSMDSAAD   Y ++QE I ++NR     
Sbjct: 258 RKFHYVSSMGDECIDVREKDDQFLIQPIRRSFSMDSAADPQLYMTVQEIIRNKNRPLSEV 317

Query: 167 XXXXXXXXXXXXXXXXFGHVRGSRSSVLPIEF 72
                           FGH RGSR++VLPIEF
Sbjct: 318 STSQECDSRVRRSFFSFGHGRGSRNAVLPIEF 349


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score =  103 bits (257), Expect = 1e-20
 Identities = 64/148 (43%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
 Frame = -2

Query: 464 VGSDEDFVVIELIGEQSRNESRIH---------------HHSPAKVQQKTVKLKPRKSRH 330
           +G DEDFVVIEL  + S + S +                  SP K++Q+ V  K RK  H
Sbjct: 212 IGGDEDFVVIELGNDSSADSSLLRPPERLNSRELSAPSISPSPRKLEQRIVPKKARKFHH 271

Query: 329 ASIMGDEFINVRESDDQFYIQPFRRSFSMDSAADRHTYSSLQEITSQNRQHXXXXXXXXX 150
            + MGDE I+ R  DDQF IQP RRSFSMDS+ DR  Y ++QEI  QNR           
Sbjct: 272 VASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQNRPVSDFSPSEGC 331

Query: 149 XXXXXXXXXXFGHVRGSRSSVLPIEF*P 66
                     FGH RGSRS+VLPI   P
Sbjct: 332 SSRFRRSFFSFGHGRGSRSAVLPIPMDP 359


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score =  103 bits (257), Expect = 1e-20
 Identities = 64/148 (43%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
 Frame = -2

Query: 464 VGSDEDFVVIELIGEQSRNESRIH---------------HHSPAKVQQKTVKLKPRKSRH 330
           +G DEDFVVIEL  + S + S +                  SP K++Q+ V  K RK  H
Sbjct: 272 IGGDEDFVVIELGNDSSADSSLLRPPERLNSRELSAPSISPSPRKLEQRIVPKKARKFHH 331

Query: 329 ASIMGDEFINVRESDDQFYIQPFRRSFSMDSAADRHTYSSLQEITSQNRQHXXXXXXXXX 150
            + MGDE I+ R  DDQF IQP RRSFSMDS+ DR  Y ++QEI  QNR           
Sbjct: 332 VASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQNRPVSDFSPSEGC 391

Query: 149 XXXXXXXXXXFGHVRGSRSSVLPIEF*P 66
                     FGH RGSRS+VLPI   P
Sbjct: 392 SSRFRRSFFSFGHGRGSRSAVLPIPMDP 419