BLASTX nr result

ID: Bupleurum21_contig00012099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012099
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]        81   1e-13
gb|ABK93977.1| unknown [Populus trichocarpa]                           76   2e-12
ref|XP_004137868.1| PREDICTED: uncharacterized protein LOC101207...    76   3e-12
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]        75   4e-12
ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi...    74   1e-11

>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/55 (70%), Positives = 43/55 (78%)
 Frame = +1

Query: 130 TPVQAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGKT 294
           TP +A+ GKKR  +SATKTPVPDKKAK VT QK DGKK S HV TPHP KQ GK+
Sbjct: 199 TPKKAEPGKKRKADSATKTPVPDKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKS 253


>gb|ABK93977.1| unknown [Populus trichocarpa]
          Length = 305

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = +1

Query: 130 TPVQAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGKT 294
           TP +A+ GKKRS ESA+K PVPDKKAK VT QK D KK+ VH+ TPHP KQ  KT
Sbjct: 211 TPKKAEVGKKRSAESASKNPVPDKKAKFVTPQKTDLKKAGVHIATPHPSKQAAKT 265


>ref|XP_004137868.1| PREDICTED: uncharacterized protein LOC101207572 [Cucumis sativus]
           gi|449500996|ref|XP_004161249.1| PREDICTED:
           uncharacterized protein LOC101226213 [Cucumis sativus]
          Length = 318

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/54 (66%), Positives = 41/54 (75%)
 Frame = +1

Query: 130 TPVQAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGK 291
           TP +A++ KKR L+SA KTP PDKKAKLVT QK DGKK   HV TPHP K+ GK
Sbjct: 218 TPKKAEASKKRPLDSANKTPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGK 271


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/55 (65%), Positives = 40/55 (72%)
 Frame = +1

Query: 130 TPVQAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGKT 294
           TP +A+  KKR  +SA KTP PDKKAK  T QK DGKK +VHV TPHP KQ GKT
Sbjct: 186 TPKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKTDGKKGAVHVATPHPSKQAGKT 240


>ref|XP_002326411.1| histone deacetylase [Populus trichocarpa]
           gi|222833604|gb|EEE72081.1| histone deacetylase [Populus
           trichocarpa]
          Length = 271

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/52 (69%), Positives = 40/52 (76%)
 Frame = +1

Query: 139 QAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGKT 294
           QA+ GKKRS ESA+K PVPDKKAK VT QK D KK+ VH+ TPHP KQ  KT
Sbjct: 180 QAEVGKKRSAESASKNPVPDKKAKFVTPQKTDLKKAGVHIATPHPSKQAAKT 231


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