BLASTX nr result
ID: Bupleurum21_contig00012099
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00012099 (297 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum] 81 1e-13 gb|ABK93977.1| unknown [Populus trichocarpa] 76 2e-12 ref|XP_004137868.1| PREDICTED: uncharacterized protein LOC101207... 76 3e-12 gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum] 75 4e-12 ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi... 74 1e-11 >gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum] Length = 295 Score = 80.9 bits (198), Expect = 1e-13 Identities = 39/55 (70%), Positives = 43/55 (78%) Frame = +1 Query: 130 TPVQAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGKT 294 TP +A+ GKKR +SATKTPVPDKKAK VT QK DGKK S HV TPHP KQ GK+ Sbjct: 199 TPKKAEPGKKRKADSATKTPVPDKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKS 253 >gb|ABK93977.1| unknown [Populus trichocarpa] Length = 305 Score = 76.3 bits (186), Expect = 2e-12 Identities = 37/55 (67%), Positives = 42/55 (76%) Frame = +1 Query: 130 TPVQAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGKT 294 TP +A+ GKKRS ESA+K PVPDKKAK VT QK D KK+ VH+ TPHP KQ KT Sbjct: 211 TPKKAEVGKKRSAESASKNPVPDKKAKFVTPQKTDLKKAGVHIATPHPSKQAAKT 265 >ref|XP_004137868.1| PREDICTED: uncharacterized protein LOC101207572 [Cucumis sativus] gi|449500996|ref|XP_004161249.1| PREDICTED: uncharacterized protein LOC101226213 [Cucumis sativus] Length = 318 Score = 75.9 bits (185), Expect = 3e-12 Identities = 36/54 (66%), Positives = 41/54 (75%) Frame = +1 Query: 130 TPVQAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGK 291 TP +A++ KKR L+SA KTP PDKKAKLVT QK DGKK HV TPHP K+ GK Sbjct: 218 TPKKAEASKKRPLDSANKTPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGK 271 >gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum] Length = 282 Score = 75.5 bits (184), Expect = 4e-12 Identities = 36/55 (65%), Positives = 40/55 (72%) Frame = +1 Query: 130 TPVQAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGKT 294 TP +A+ KKR +SA KTP PDKKAK T QK DGKK +VHV TPHP KQ GKT Sbjct: 186 TPKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKTDGKKGAVHVATPHPSKQAGKT 240 >ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi|222833604|gb|EEE72081.1| histone deacetylase [Populus trichocarpa] Length = 271 Score = 73.9 bits (180), Expect = 1e-11 Identities = 36/52 (69%), Positives = 40/52 (76%) Frame = +1 Query: 139 QAKSGKKRSLESATKTPVPDKKAKLVTLQKIDGKKSSVHVDTPHPLKQTGKT 294 QA+ GKKRS ESA+K PVPDKKAK VT QK D KK+ VH+ TPHP KQ KT Sbjct: 180 QAEVGKKRSAESASKNPVPDKKAKFVTPQKTDLKKAGVHIATPHPSKQAAKT 231