BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012097
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      82   9e-14
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                   83   1e-13
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    74   3e-12
emb|CAN60196.1| hypothetical protein VITISV_019178 [Vitis vinifera]    72   3e-12
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              70   4e-12

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 81.6 bits (200), Expect(2) = 9e-14
 Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
 Frame = -1

Query: 902  FRLAYGIEAMLPIEVGSPSHQVIHFEEVANEERIRTNMQLLDEVRDQAIHKIE*YKEKTR 723
            F L YG EA+LPIE   P+ +   F  V NEE ++ ++ L++E RD A   +  Y+ + R
Sbjct: 1171 FHLVYGSEAVLPIEAVVPTFRTATFNPVENEEGLKASLDLVEESRDTARLNLAVYQNRMR 1230

Query: 722  AYFGQKAKVKNFQVGDLVLWDTEASDPTNT-GKLQPN*EGPYKVSEVLRPG 573
              +  +   ++ +VGDLVL  + A++  N  GK+  N EGPYKV E +RPG
Sbjct: 1231 RAYNHRVHKRDLRVGDLVLRKSTATNKGNIHGKMTTNWEGPYKVVEEMRPG 1281



 Score = 21.9 bits (45), Expect(2) = 9e-14
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 973  YPQGNGQVEVTNRIL 929
            +PQ NGQ E  N+ +
Sbjct: 1118 HPQSNGQAEAANKTI 1132


>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 48/113 (42%), Positives = 64/113 (56%)
 Frame = -1

Query: 911  ETLFRLAYGIEAMLPIEVGSPSHQVIHFEEVANEERIRTNMQLLDEVRDQAIHKIE*YKE 732
            ET F L YG EAMLP E+   S +  HF+E    ER   ++  L+E R+QA+ +   Y++
Sbjct: 1961 ETSFFLVYGAEAMLPPELKIGSARTDHFDETDQNERRLDDVDFLEERRNQALVRSAVYQQ 2020

Query: 731  KTRAYFGQKAKVKNFQVGDLVLWDTEASDPTNTGKLQPN*EGPYKVSEVLRPG 573
              R Y  +K + ++  VGDLVL   +    TN  KL P  EGPY V EV RPG
Sbjct: 2021 AMRRYHSRKVQPRSLAVGDLVL--RKIQSQTNRNKLSPKWEGPYTVVEVTRPG 2071


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 73.9 bits (180), Expect(2) = 3e-12
 Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
 Frame = -1

Query: 908  TLFRLAYGIEAMLPIEVGSPS--HQVIHFEEVANEERIRTNMQLLDEVRDQAIHKIE*YK 735
            T F L YG+EA+ P E G P+    ++  +   N++ +  N+  L+E RDQA+ +I+ Y+
Sbjct: 1647 TPFSLTYGMEALAPCEAGLPTVRRSMLINDPTLNDQMLLDNLDTLEEQRDQALLRIQNYQ 1706

Query: 734  EKTRAYFGQKAKVKNFQVGDLVLWDT-EASDPTNTGKLQPN*EGPYKVSEVLRPG 573
            +    ++ +K K + F  GDLVL    E +   + GKL  + EGPY +S+V++PG
Sbjct: 1707 QAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPG 1761



 Score = 24.6 bits (52), Expect(2) = 3e-12
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 973  YPQGNGQVEVTNRIL 929
            YPQ NGQ E TN+ +
Sbjct: 1596 YPQCNGQAEATNKTI 1610


>emb|CAN60196.1| hypothetical protein VITISV_019178 [Vitis vinifera]
          Length = 917

 Score = 72.0 bits (175), Expect(2) = 3e-12
 Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = -1

Query: 908  TLFRLAYGIEAMLPIEVGSPSHQVIHFEEVANEERIRTNMQLLDEVRDQAIHKIE*YKEK 729
            TLF LAYG++A++PIE+G P+ +    ++      +  N+   DEVR+ A  ++  Y+++
Sbjct: 779  TLFALAYGMDAVIPIEIGLPTVRTDAAKQNDANTELGRNLDWADEVRESAAIRMADYQQR 838

Query: 728  TRAYFGQKAKVKNFQVGDLVLWDT-EASDPTNTGKLQPN*EGPYKVSEVLRPG 573
              A++ +K K ++F+ G LVL    E +     GK Q N EGPY VS+    G
Sbjct: 839  ASAHYNRKVKPRSFKNGTLVLRKVFENTAEVGAGKFQANWEGPYIVSKASESG 891



 Score = 26.6 bits (57), Expect(2) = 3e-12
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 973 YPQGNGQVEVTNRIL 929
           YPQ NGQ E TN+ L
Sbjct: 728 YPQSNGQAEATNKTL 742


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 70.1 bits (170), Expect(2) = 4e-12
 Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
 Frame = -1

Query: 911  ETLFRLAYGIEAMLPIEVGSPS--HQVIHFEEVANEERIRTNMQLLDEVRDQAIHKIE*Y 738
            +T F  AYG+EAM P EVG  S    ++      N+  +   +  L+E+R+ A+ +I+ Y
Sbjct: 1697 QTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELNDRMMLDRLDDLEEIRNAALCRIQNY 1756

Query: 737  KEKTRAYFGQKAKVKNFQVGDLVLWDT-EASDPTNTGKLQPN*EGPYKVSEVLRPG 573
            +     ++ QK   ++F VGDLVL    E +   N GKL  N EG Y+VS+++RPG
Sbjct: 1757 QLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQVSKIVRPG 1812



 Score = 28.1 bits (61), Expect(2) = 4e-12
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 973  YPQGNGQVEVTNRIL 929
            YPQGNGQ E TN+ +
Sbjct: 1647 YPQGNGQAEATNKTI 1661