BLASTX nr result

ID: Bupleurum21_contig00012092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012092
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143437.1| PREDICTED: elongator complex protein 4-like ...   497   e-138
emb|CBI40843.3| unnamed protein product [Vitis vinifera]              497   e-138
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   494   e-137
ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|2...   493   e-137
ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like ...   493   e-137

>ref|XP_004143437.1| PREDICTED: elongator complex protein 4-like [Cucumis sativus]
            gi|449496395|ref|XP_004160123.1| PREDICTED: elongator
            complex protein 4-like [Cucumis sativus]
          Length = 362

 Score =  497 bits (1280), Expect = e-138
 Identities = 246/340 (72%), Positives = 286/340 (84%), Gaps = 2/340 (0%)
 Frame = -3

Query: 1316 MAATKTRTSSFSRNFAAVPSSLTTGLKNGPNGTVFVSSGIADLDKILGGGFPLGSLVMVM 1137
            MAATK RTSSFSRNF++  SS T G K+GPNGT F+SSGI DLDKIL GGFPLGSLV+VM
Sbjct: 1    MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 1136 EDSDAPHHMLLLRNFMSQGLVHNQPLLYASPAKDPRSFLGTLPNPATSKDDKARDREVEQ 957
            ED++APHHMLLLRNFMSQGLVH+QPLLYASP++DPR FLGTLP+P  SKDDK+RD   EQ
Sbjct: 61   EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120

Query: 956  VSDKGLRIAWQYKKYFGEQQNFDHHRDGKLEYCNDFDLRKPLDRHFLNGQKIECISLQDS 777
              +KGLRIAWQYKKYFG+ Q   +  D K E+CNDFDLR+P DRHF +G+ +EC+S+ DS
Sbjct: 121  --EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDS 178

Query: 776  SNISTLLDRCSTFLSQ--RQESNATCAGRIAIQSFCSPQCDFSDLDWDMLSFIRSLKSMV 603
            S++STL DRC+TFLSQ  R + N +  GRIAIQS C+PQCD S+++W+MLSF+RSLKSMV
Sbjct: 179  SSLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMV 238

Query: 602  RASNAVAVIXXXXXXXXXXXSKRWQHLADTLLSVRAIQDEDKELAKLLTGYQDMIGLLSV 423
            R+SNAVAV+           SKRWQH+ADTLLSVRAI DEDKELAKLLTGYQDM+GLL+V
Sbjct: 239  RSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNV 298

Query: 422  HKVARFNTQVPVILEATTFSMKLQKRRLLVLECLNQAPVD 303
            HKVA+ NTQVP ILEATTFS+KLQKRR LVLECLNQAPVD
Sbjct: 299  HKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVD 338


>emb|CBI40843.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  497 bits (1279), Expect = e-138
 Identities = 244/337 (72%), Positives = 284/337 (84%), Gaps = 3/337 (0%)
 Frame = -3

Query: 1304 KTRTSSFSRNFAAVPSSLTTGLKNGPNGTVFVSSGIADLDKILGGGFPLGSLVMVMEDSD 1125
            KTR SSFSRN +  P+    GLK+GPNGT+F+SSGI DLDKILGGGFPLGSLVMVMED++
Sbjct: 2    KTRMSSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTE 61

Query: 1124 APHHMLLLRNFMSQGLVHNQPLLYASPAKDPRSFLGTLPNPATSKDDKARDREVEQVSDK 945
            APHHMLLLRNFMSQGLVHNQPLLYASP+KDPR+FLGTLP+P  SKDD++ +R+ EQ+ +K
Sbjct: 62   APHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQLQEK 121

Query: 944  GLRIAWQYKKYFGEQQ-NFDHHRDGKLEYCNDFDLRKPLDRHFLNGQKIECISLQDSSNI 768
            GLRIAWQYKKYFGE + NFD HRD K EYCNDFDLRKPL+R+FL  Q I C+S+QD  N+
Sbjct: 122  GLRIAWQYKKYFGEHRPNFDSHRDTKHEYCNDFDLRKPLERYFLTAQNICCLSIQDPPNL 181

Query: 767  STLLDRCSTFLSQ--RQESNATCAGRIAIQSFCSPQCDFSDLDWDMLSFIRSLKSMVRAS 594
            +   D C+ FL+Q  R  S+ +CAGR+AIQSFC+PQC++S+++WDMLSFIRSLK M+R S
Sbjct: 182  AAFRDCCAKFLAQFSRNNSSISCAGRVAIQSFCAPQCEYSNMEWDMLSFIRSLKGMIRDS 241

Query: 593  NAVAVIXXXXXXXXXXXSKRWQHLADTLLSVRAIQDEDKELAKLLTGYQDMIGLLSVHKV 414
            NAVAVI           SKRWQH+ADTLLSV+AI DEDKELA LLTGYQDM+GLL+VHKV
Sbjct: 242  NAVAVITFPPSLLSPSSSKRWQHIADTLLSVKAIPDEDKELANLLTGYQDMVGLLNVHKV 301

Query: 413  ARFNTQVPVILEATTFSMKLQKRRLLVLECLNQAPVD 303
            A  NTQVPVILEATTFS+KLQKRR LVLECLNQAPVD
Sbjct: 302  ANVNTQVPVILEATTFSIKLQKRRYLVLECLNQAPVD 338


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  494 bits (1271), Expect = e-137
 Identities = 247/341 (72%), Positives = 284/341 (83%), Gaps = 3/341 (0%)
 Frame = -3

Query: 1316 MAATKTRTSSFSRNFAAVPSSLTTGLKNGPNGTVFVSSGIADLDKILGGGFPLGSLVMVM 1137
            MAA KTR SSFSRN +  P+    GLK+GPNGT+F+SSGI DLDKILGGGFPLGSLVMVM
Sbjct: 1    MAAMKTRMSSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVM 60

Query: 1136 EDSDAPHHMLLLRNFMSQGLVHNQPLLYASPAKDPRSFLGTLPNPATSKDDKARDREVEQ 957
            ED++APHHMLLLRNFMSQGLVHNQPLLYASP+KDPR+FLGTLP+P  SKDD++ +R+ EQ
Sbjct: 61   EDTEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQ 120

Query: 956  VSDKGLRIAWQYKKYFGEQQ-NFDHHRDGKLEYCNDFDLRKPLDRHFLNGQKIECISLQD 780
              +KGLRIAWQYKKYFGE Q NFD HRD K EYCNDFDLRKPL+R FL  Q I C+S+QD
Sbjct: 121  --EKGLRIAWQYKKYFGEHQPNFDSHRDTKHEYCNDFDLRKPLERXFLTAQNICCLSIQD 178

Query: 779  SSNISTLLDRCSTFLSQ--RQESNATCAGRIAIQSFCSPQCDFSDLDWDMLSFIRSLKSM 606
              N++   D C+ FL+Q  R  S+ +CAGR+AIQSFC+PQC++S+++WDMLSFIRSLK M
Sbjct: 179  PPNLAAXRDCCAKFLAQFSRNNSSISCAGRVAIQSFCAPQCEYSNMEWDMLSFIRSLKGM 238

Query: 605  VRASNAVAVIXXXXXXXXXXXSKRWQHLADTLLSVRAIQDEDKELAKLLTGYQDMIGLLS 426
            +R  NAVAVI           SKRWQH+ADTLLSV+AI DEDKELA LLTGYQDM+GLL+
Sbjct: 239  IRDLNAVAVITFPPSLLSPSSSKRWQHIADTLLSVKAIPDEDKELANLLTGYQDMVGLLN 298

Query: 425  VHKVARFNTQVPVILEATTFSMKLQKRRLLVLECLNQAPVD 303
            VHKVA  NTQVPVILEATTFS+KLQKRR LVLECLNQAPVD
Sbjct: 299  VHKVANVNTQVPVILEATTFSIKLQKRRYLVLECLNQAPVD 339


>ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|222865257|gb|EEF02388.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  493 bits (1270), Expect = e-137
 Identities = 240/341 (70%), Positives = 286/341 (83%), Gaps = 3/341 (0%)
 Frame = -3

Query: 1316 MAATKTRTSSFSRNFAAVPSSLTTGLKNGPNGTVFVSSGIADLDKILGGGFPLGSLVMVM 1137
            MAATKTR SSFSRN +AV +    G+K GPNGT FVSSGI DLDKILGGGFPLGSLVM+M
Sbjct: 1    MAATKTRISSFSRNISAVSAPQLPGIKCGPNGTFFVSSGIPDLDKILGGGFPLGSLVMIM 60

Query: 1136 EDSDAPHHMLLLRNFMSQGLVHNQPLLYASPAKDPRSFLGTLPNPATSKDDKARDREVEQ 957
            ED++APHHMLLLRNFMSQGLV NQPLLYASPAKDPR FLGTLP P++SKDDK+R+ + EQ
Sbjct: 61   EDAEAPHHMLLLRNFMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTEQ 120

Query: 956  VSDKGLRIAWQYKKYFGE-QQNFDHHRDGKLEYCNDFDLRKPLDRHFLNGQKIECISLQD 780
              +KGLRIAWQYKKYF E Q+N D H+D   E+CNDFDLRKPL++HF +GQ+++C+S++D
Sbjct: 121  --EKGLRIAWQYKKYFSENQKNIDDHKDSNQEFCNDFDLRKPLEKHFYSGQRVDCVSIKD 178

Query: 779  SSNISTLLDRCSTFLSQ--RQESNATCAGRIAIQSFCSPQCDFSDLDWDMLSFIRSLKSM 606
            S N++TL DRC+TFL+Q  R + + +C GRIAIQS C+PQC+ S +DWDMLSFIRSLKSM
Sbjct: 179  SPNLATLHDRCATFLAQFPRNDGSFSCMGRIAIQSLCAPQCELSKMDWDMLSFIRSLKSM 238

Query: 605  VRASNAVAVIXXXXXXXXXXXSKRWQHLADTLLSVRAIQDEDKELAKLLTGYQDMIGLLS 426
            +R++NAVA+I            KRWQH+AD LLSV+AI DEDKEL KLLTGYQDM+G L+
Sbjct: 239  LRSANAVAIITFPSSLLSPSFCKRWQHMADVLLSVKAIPDEDKELGKLLTGYQDMVGFLN 298

Query: 425  VHKVARFNTQVPVILEATTFSMKLQKRRLLVLECLNQAPVD 303
            VHK+AR NTQVP+ILEATTFS+KL KRR LVLECLNQAP+D
Sbjct: 299  VHKIARINTQVPMILEATTFSIKLHKRRFLVLECLNQAPID 339


>ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like [Vitis vinifera]
          Length = 361

 Score =  493 bits (1268), Expect = e-137
 Identities = 246/341 (72%), Positives = 284/341 (83%), Gaps = 3/341 (0%)
 Frame = -3

Query: 1316 MAATKTRTSSFSRNFAAVPSSLTTGLKNGPNGTVFVSSGIADLDKILGGGFPLGSLVMVM 1137
            MAA KTR SSFSRN +  P+    GLK+GPNGT+F+SSGI DLDKILGGGFPLGSLVMVM
Sbjct: 1    MAAMKTRMSSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVM 60

Query: 1136 EDSDAPHHMLLLRNFMSQGLVHNQPLLYASPAKDPRSFLGTLPNPATSKDDKARDREVEQ 957
            ED++APHHMLLLRNFMSQGLVHNQPLLYASP+KDPR+FLGTLP+P  SKDD++ +R+ EQ
Sbjct: 61   EDTEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQ 120

Query: 956  VSDKGLRIAWQYKKYFGEQQ-NFDHHRDGKLEYCNDFDLRKPLDRHFLNGQKIECISLQD 780
                GLRIAWQYKKYFGE + NFD HRD K EYCNDFDLRKPL+R+FL  Q I C+S+QD
Sbjct: 121  ----GLRIAWQYKKYFGEHRPNFDSHRDTKHEYCNDFDLRKPLERYFLTAQNICCLSIQD 176

Query: 779  SSNISTLLDRCSTFLSQ--RQESNATCAGRIAIQSFCSPQCDFSDLDWDMLSFIRSLKSM 606
              N++   D C+ FL+Q  R  S+ +CAGR+AIQSFC+PQC++S+++WDMLSFIRSLK M
Sbjct: 177  PPNLAAFRDCCAKFLAQFSRNNSSISCAGRVAIQSFCAPQCEYSNMEWDMLSFIRSLKGM 236

Query: 605  VRASNAVAVIXXXXXXXXXXXSKRWQHLADTLLSVRAIQDEDKELAKLLTGYQDMIGLLS 426
            +R SNAVAVI           SKRWQH+ADTLLSV+AI DEDKELA LLTGYQDM+GLL+
Sbjct: 237  IRDSNAVAVITFPPSLLSPSSSKRWQHIADTLLSVKAIPDEDKELANLLTGYQDMVGLLN 296

Query: 425  VHKVARFNTQVPVILEATTFSMKLQKRRLLVLECLNQAPVD 303
            VHKVA  NTQVPVILEATTFS+KLQKRR LVLECLNQAPVD
Sbjct: 297  VHKVANVNTQVPVILEATTFSIKLQKRRYLVLECLNQAPVD 337


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