BLASTX nr result

ID: Bupleurum21_contig00012074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012074
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533290.1| PREDICTED: DNA-binding protein RHL1-like [Gl...    62   4e-08
ref|XP_003549172.1| PREDICTED: DNA-binding protein RHL1-like [Gl...    56   3e-06
emb|CBI40527.3| unnamed protein product [Vitis vinifera]               55   6e-06
ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 isoform ...    55   6e-06
ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatul...    55   8e-06

>ref|XP_003533290.1| PREDICTED: DNA-binding protein RHL1-like [Glycine max]
          Length = 421

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 17/119 (14%)
 Frame = +2

Query: 2   SYKFAEASSGDDSVEEITGTSEEKEKLVDLEYSEKKLNSG-----KTSESDLAAHNMENE 166
           SYKFAE SSGDDS E     S+++EK+V+++ +    NS         +      ++++E
Sbjct: 246 SYKFAEISSGDDSGENSPELSDDEEKVVEVDTAVNDHNSSNILIVSLIQKKTVVFDLDDE 305

Query: 167 DSVAHTSMSQIQQSATSITKSKNTSH------------INKSSLVQATISNMFKKIDEQ 307
           D       ++I   + S +KSK  S              N+ SLVQATIS +FKK++E+
Sbjct: 306 DDAPVDQPAKINTESASRSKSKEVSQSASASASTEVKSSNRGSLVQATISTLFKKVEEK 364


>ref|XP_003549172.1| PREDICTED: DNA-binding protein RHL1-like [Glycine max]
          Length = 415

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
 Frame = +2

Query: 8   KFAEASSGDDSVEEITGTSEEKEKLVDLEYSEKKLNSG----------KTSESDLAAHN- 154
           +FAE SSGDDS E     S+ +EK+ +++ +    NS           KT   DL   + 
Sbjct: 239 RFAEISSGDDSGENSPDLSDHEEKVAEVDTAVNDHNSSNILIVSLIQKKTVVFDLDDEDD 298

Query: 155 -------MENEDSVAHTSMSQIQQSATSITKSKNTSHINKSSLVQATISNMFKKIDEQ 307
                   +N +S + +   ++ QSA S + S      N+ SLVQATIS +FKK++E+
Sbjct: 299 APVDQPAKKNNESASRSKCKEVSQSA-SASASTEVKSSNRGSLVQATISTLFKKVEEK 355


>emb|CBI40527.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   SYKFAEASSGDDSVEEITGTSEEKEKLVDLEYSEKKLNSGKTSESDLAAHNMENEDSVAH 181
           ++ FAEASSGDDSVE     S+ +E            NSG       A     NED+ A 
Sbjct: 209 TFNFAEASSGDDSVENDGNISDGQE------------NSGS------ATPESGNEDAEAR 250

Query: 182 T-SMSQIQQSATSITKSKNTSHINKSSLVQATISNMFKKIDEQ 307
           T + +QIQ+SA + TKS+         L QATIS +FKK++EQ
Sbjct: 251 TGATTQIQESAGAATKSRKR-------LSQATISTLFKKVEEQ 286


>ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 isoform 1 [Vitis vinifera]
           gi|359489730|ref|XP_003633969.1| PREDICTED: DNA-binding
           protein RHL1 isoform 2 [Vitis vinifera]
          Length = 449

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   SYKFAEASSGDDSVEEITGTSEEKEKLVDLEYSEKKLNSGKTSESDLAAHNMENEDSVAH 181
           ++ FAEASSGDDSVE     S+ +E            NSG       A     NED+ A 
Sbjct: 247 TFNFAEASSGDDSVENDGNISDGQE------------NSGS------ATPESGNEDAEAR 288

Query: 182 T-SMSQIQQSATSITKSKNTSHINKSSLVQATISNMFKKIDEQ 307
           T + +QIQ+SA + TKS+         L QATIS +FKK++EQ
Sbjct: 289 TGATTQIQESAGAATKSRKR-------LSQATISTLFKKVEEQ 324


>ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatula]
           gi|355495168|gb|AES76371.1| DNA-binding protein RHL1
           [Medicago truncatula]
          Length = 435

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
 Frame = +2

Query: 2   SYKFAEASSGDDSVEEITGTSEEKEKLVDLEYSEK--------KLNSGKTSESDLAAHNM 157
           SYKFAE SSGDDS +     SE +EK V+++             + S    + + A  ++
Sbjct: 251 SYKFAEISSGDDSGKSSPDLSEHEEKAVEVDTDANDHTSSNILSVISASPVQKETAVIDI 310

Query: 158 ENEDSVAHTSMSQIQQSATSITKSKNTSHINKSSLVQATISNMFKKID 301
           ++ED      +    +   S++K+K      K  LVQATIS++FKK++
Sbjct: 311 DDEDDAPKDQLPVENKEPASVSKAK------KGLLVQATISSLFKKVE 352


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