BLASTX nr result

ID: Bupleurum21_contig00012064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012064
         (1459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis ...   820   0.0  
ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [C...   816   0.0  
ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex...   810   0.0  
ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|2...   798   0.0  
gb|ABR16746.1| unknown [Picea sitchensis]                             780   0.0  

>ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis vinifera]
            gi|302142544|emb|CBI19747.3| unnamed protein product
            [Vitis vinifera]
          Length = 451

 Score =  820 bits (2117), Expect = 0.0
 Identities = 407/451 (90%), Positives = 431/451 (95%)
 Frame = -3

Query: 1457 MISQFFVLSQRGDNIVFRDYRGDVQKGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH 1278
            MISQFFVLSQRGDNIVFRDYRG+V KGSAEIFFRKVKFWKEDGE +APPVFNVDGVNYFH
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 1277 VKVVGLLFVATTRSNVSPSLVLELLQRIARVTKDYLGILNEDSLRKNFVLVYELLDEVID 1098
            VKV GLLFVATTR NVSPSLVLELLQRIARV KDYLGILNEDSLRKNFVLVYELLDEVID
Sbjct: 61   VKVAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 1097 FGYVQTTSTEVLKASVFNEPIMIDAGRLPALGPASIFMQGTKRMPGTAVTKSVVANEPGG 918
            FGYVQTTSTEVLK+ VFNEPI++DA RLP LGPASIFMQGTKRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 917  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLSIGRGGR 738
            RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALN++LSIGRGGR
Sbjct: 181  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEELSIGRGGR 240

Query: 737  SIYDYGGSSGAGAVILDDCNFHESVHLDSFEVDRTMSLVPPDGEFPVMNYRITQEFKPPF 558
            SIYDY  S+G+G VILDDCNFHESVHLDSF++DRT++LVPPDGEFPVMNYR+TQEFKPPF
Sbjct: 241  SIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 557  RINTLIEEAGSLKAEVILKIRAEFASSITANAIAVQMPLPTYTTRVSFELEPGAVGQTTD 378
            RIN LIEEAG+L+AEVILK+RAEF SSITAN I VQMPLP YTTRVSFELEPGAVG TTD
Sbjct: 301  RINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVSFELEPGAVGNTTD 360

Query: 377  FKESNKKLEWNLKKIVGGSEHTLRAKLTFSQESHGNITKEAGPVSMTFTIPMYNASKLQV 198
            FKE+NK+LEW LKKIVGGSEHTLRAKLTFSQE HGNIT+EAGPVSMTFTIPMYNAS+LQV
Sbjct: 361  FKEANKRLEWGLKKIVGGSEHTLRAKLTFSQELHGNITREAGPVSMTFTIPMYNASRLQV 420

Query: 197  KYLQIAKKSKTYNPYRWVRYVTQANSYVARI 105
            KYLQI+KKSK YNPYRWVRYVTQ+NSYVAR+
Sbjct: 421  KYLQISKKSKAYNPYRWVRYVTQSNSYVARL 451


>ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [Cucumis sativus]
          Length = 451

 Score =  816 bits (2109), Expect = 0.0
 Identities = 404/451 (89%), Positives = 431/451 (95%)
 Frame = -3

Query: 1457 MISQFFVLSQRGDNIVFRDYRGDVQKGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH 1278
            MISQFFVLSQRGDNIVFRDYRG+V KGSAEIFFRKVKFWKEDGE +APPVFN+DGVNYFH
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 1277 VKVVGLLFVATTRSNVSPSLVLELLQRIARVTKDYLGILNEDSLRKNFVLVYELLDEVID 1098
            VKVVGLLFVATTR N SPSLVLELLQRIARV KDYLG+LNEDSLR+NFVLVYELLDEVID
Sbjct: 61   VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 1097 FGYVQTTSTEVLKASVFNEPIMIDAGRLPALGPASIFMQGTKRMPGTAVTKSVVANEPGG 918
            FGYVQTTSTEVLK+ VFNEPI++DA RLP LGPASIF+QG+KRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 917  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLSIGRGGR 738
            RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALN+DLSIG+GGR
Sbjct: 181  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGKGGR 240

Query: 737  SIYDYGGSSGAGAVILDDCNFHESVHLDSFEVDRTMSLVPPDGEFPVMNYRITQEFKPPF 558
            SIYDY  SSG G VILDDCNFHESVHL++F++DRT+ LVPP+GEFPVMNYR+TQEFKPPF
Sbjct: 241  SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 557  RINTLIEEAGSLKAEVILKIRAEFASSITANAIAVQMPLPTYTTRVSFELEPGAVGQTTD 378
            RIN LIEEAGSLKAEVILK+RAEFASSITAN I +QMPLPT+TTRVSFELEPGAVG TTD
Sbjct: 301  RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 377  FKESNKKLEWNLKKIVGGSEHTLRAKLTFSQESHGNITKEAGPVSMTFTIPMYNASKLQV 198
            FKE+NK+LEW LKKIVGGSEHTLRA+LTFSQESHGNI KEAGPVSMTFTIPMYNAS+LQV
Sbjct: 361  FKEANKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 197  KYLQIAKKSKTYNPYRWVRYVTQANSYVARI 105
            KYLQIAKKS TYNPYRWVRYVTQANSYVAR+
Sbjct: 421  KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451


>ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex subunit mu-1-like
            [Cucumis sativus]
          Length = 451

 Score =  810 bits (2091), Expect = 0.0
 Identities = 403/451 (89%), Positives = 429/451 (95%)
 Frame = -3

Query: 1457 MISQFFVLSQRGDNIVFRDYRGDVQKGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH 1278
            MISQFFVLSQRGDNIVFRDYRG+V KGSAEIFFRKVKFWKEDGE +APPVFN+DGVNYFH
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 1277 VKVVGLLFVATTRSNVSPSLVLELLQRIARVTKDYLGILNEDSLRKNFVLVYELLDEVID 1098
            VKVVGLLFVATTR N SPSLVLELLQRIARV KDYLG+LNEDSLR+NFVLVYELLDEVID
Sbjct: 61   VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 1097 FGYVQTTSTEVLKASVFNEPIMIDAGRLPALGPASIFMQGTKRMPGTAVTKSVVANEPGG 918
            FGYVQTTSTEVLK+ VFNEPI++DA RLP LGPASIF+QG+KRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 917  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLSIGRGGR 738
            RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALN+DLSIGRGGR
Sbjct: 181  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 737  SIYDYGGSSGAGAVILDDCNFHESVHLDSFEVDRTMSLVPPDGEFPVMNYRITQEFKPPF 558
            SIYDY  SSG G VILDDCNFHESVHL++F++DRT+ LVPP+GEFPVMNYR+TQEFKPPF
Sbjct: 241  SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 557  RINTLIEEAGSLKAEVILKIRAEFASSITANAIAVQMPLPTYTTRVSFELEPGAVGQTTD 378
            RIN LIEEAGSLKAEVILK+RAEFASSITAN I +QMPLPT+TTRVSFELEPGAVG TTD
Sbjct: 301  RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 377  FKESNKKLEWNLKKIVGGSEHTLRAKLTFSQESHGNITKEAGPVSMTFTIPMYNASKLQV 198
            FKE+NK+LE   KKIVGGSEHTLRA+LTFSQESHGNI KEAGPVSMTFTIPMYNAS+LQV
Sbjct: 361  FKEANKRLEXVWKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 197  KYLQIAKKSKTYNPYRWVRYVTQANSYVARI 105
            KYLQIAKKS TYNPYRWVRYVTQANSYVAR+
Sbjct: 421  KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451


>ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|222844066|gb|EEE81613.1|
            predicted protein [Populus trichocarpa]
          Length = 446

 Score =  798 bits (2060), Expect = 0.0
 Identities = 400/451 (88%), Positives = 427/451 (94%)
 Frame = -3

Query: 1457 MISQFFVLSQRGDNIVFRDYRGDVQKGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH 1278
            MISQFFVLSQRGDNIVFRDYRG+V KGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH 60

Query: 1277 VKVVGLLFVATTRSNVSPSLVLELLQRIARVTKDYLGILNEDSLRKNFVLVYELLDEVID 1098
            VKVVGLLFVATTR+NVSPSLVLELLQRIARV KDYLG+LNEDSLRKNFVLVYELLDEVID
Sbjct: 61   VKVVGLLFVATTRANVSPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 1097 FGYVQTTSTEVLKASVFNEPIMIDAGRLPALGPASIFMQGTKRMPGTAVTKSVVANEPGG 918
            FGYVQTTSTE+LK+ VFNEP+++DA RL  L PA+IFMQGTKRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYVQTTSTELLKSYVFNEPLVVDAARLQPLSPAAIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 917  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLSIGRGGR 738
            RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALN+DLSIGRG  
Sbjct: 181  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRG-- 238

Query: 737  SIYDYGGSSGAGAVILDDCNFHESVHLDSFEVDRTMSLVPPDGEFPVMNYRITQEFKPPF 558
               DY  S G+G+VILDDCNFHESV LD+F++DRT++LVPPDGEFPVMNYR+TQEFKPPF
Sbjct: 239  ---DYRSSFGSGSVILDDCNFHESVRLDNFDLDRTLTLVPPDGEFPVMNYRMTQEFKPPF 295

Query: 557  RINTLIEEAGSLKAEVILKIRAEFASSITANAIAVQMPLPTYTTRVSFELEPGAVGQTTD 378
            RINTLIEEAG+LKAEVILK+ AEF SSITAN I VQMPLP YTTRV+FELEPGA+GQTTD
Sbjct: 296  RINTLIEEAGALKAEVILKVSAEFPSSITANTIIVQMPLPKYTTRVNFELEPGALGQTTD 355

Query: 377  FKESNKKLEWNLKKIVGGSEHTLRAKLTFSQESHGNITKEAGPVSMTFTIPMYNASKLQV 198
            FKE+N++LEW LKKIVGGSEHTLRAKLTFSQE HGNITKEAGPVSMTFTIPMYNAS+LQV
Sbjct: 356  FKEANRRLEWGLKKIVGGSEHTLRAKLTFSQELHGNITKEAGPVSMTFTIPMYNASRLQV 415

Query: 197  KYLQIAKKSKTYNPYRWVRYVTQANSYVARI 105
            KYLQIAKKS TYNPYRWVRYVTQANSYVARI
Sbjct: 416  KYLQIAKKSSTYNPYRWVRYVTQANSYVARI 446


>gb|ABR16746.1| unknown [Picea sitchensis]
          Length = 451

 Score =  780 bits (2015), Expect = 0.0
 Identities = 385/451 (85%), Positives = 421/451 (93%)
 Frame = -3

Query: 1457 MISQFFVLSQRGDNIVFRDYRGDVQKGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH 1278
            MISQFFVLSQRGDNIVFRDYRG+V KGSAEIFFR VKFWK D  EEAPPVFNVDGVNY H
Sbjct: 1    MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRNVKFWKSDDGEEAPPVFNVDGVNYLH 60

Query: 1277 VKVVGLLFVATTRSNVSPSLVLELLQRIARVTKDYLGILNEDSLRKNFVLVYELLDEVID 1098
            VKV GLLFVATTR NVSP+LVLELLQRIARV KDYLGILNEDSLRKNFVLVYELLDEVID
Sbjct: 61   VKVAGLLFVATTRINVSPALVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 1097 FGYVQTTSTEVLKASVFNEPIMIDAGRLPALGPASIFMQGTKRMPGTAVTKSVVANEPGG 918
            FGY Q TSTEVLK+ +FNEPI++DAGR P+L PA++FMQG+KRMPGTAVTKSVVANEPGG
Sbjct: 121  FGYPQNTSTEVLKSFIFNEPIVVDAGRGPSLSPAAMFMQGSKRMPGTAVTKSVVANEPGG 180

Query: 917  RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLSIGRGGR 738
            RKREE+FVD+IEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALN+DLSIGR G 
Sbjct: 181  RKREEVFVDVIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRSGH 240

Query: 737  SIYDYGGSSGAGAVILDDCNFHESVHLDSFEVDRTMSLVPPDGEFPVMNYRITQEFKPPF 558
            S YDY  SSGAG VILDDCNFHESV LD+F++DRT++LVPPDGEFPVMNYR+TQEFKPPF
Sbjct: 241  SSYDYSSSSGAGMVILDDCNFHESVRLDNFDLDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 557  RINTLIEEAGSLKAEVILKIRAEFASSITANAIAVQMPLPTYTTRVSFELEPGAVGQTTD 378
            R+N LIEEAGSLKAEV+LK+RA+F+SSITAN +A+QMPLP YTTRVSF+LEPGAVGQTTD
Sbjct: 301  RVNALIEEAGSLKAEVMLKVRADFSSSITANTVALQMPLPKYTTRVSFDLEPGAVGQTTD 360

Query: 377  FKESNKKLEWNLKKIVGGSEHTLRAKLTFSQESHGNITKEAGPVSMTFTIPMYNASKLQV 198
            FKE NK LEW L+KIVGGSEHTLRAKLTFSQE++ NITKE+GPVSMTFTIPMY+AS+LQV
Sbjct: 361  FKEGNKMLEWGLRKIVGGSEHTLRAKLTFSQETNMNITKESGPVSMTFTIPMYSASRLQV 420

Query: 197  KYLQIAKKSKTYNPYRWVRYVTQANSYVARI 105
            +YLQI KKS+TYNPYRWVRYVTQANSYV RI
Sbjct: 421  RYLQIVKKSRTYNPYRWVRYVTQANSYVIRI 451


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