BLASTX nr result
ID: Bupleurum21_contig00012062
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00012062
(933 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoeni... 133 5e-29
ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209... 133 5e-29
emb|CAN61455.1| hypothetical protein VITISV_029794 [Vitis vinifera] 133 5e-29
ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|1705... 132 9e-29
ref|XP_002333101.1| predicted protein [Populus trichocarpa] gi|2... 132 1e-28
>ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoenix dactylifera]
gi|343478424|gb|AEM43912.1| ribosomal protein L2
(mitochondrion) [Phoenix dactylifera]
Length = 558
Score = 133 bits (335), Expect = 5e-29
Identities = 67/94 (71%), Positives = 78/94 (82%)
Frame = -3
Query: 685 STTGRSLGEYRRQFTKSKGKSAGRNSAGRITIFHRGGGAKRLQRKIDMKRITSSTGIVEK 506
S GR+L R FT + GKSAGRNS+GRIT+FHRGGG+KRLQRKID+KR TSS GIVE+
Sbjct: 4 SLKGRAL----RHFTLNTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVER 59
Query: 505 IDYDPNRSSRVALVRWTDGVQLSHRRKSNTIEEF 404
I+YDPNRSSR+ALVRW +GV L +RK NTIEEF
Sbjct: 60 IEYDPNRSSRIALVRWIEGVLLRRQRKCNTIEEF 93
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -2
Query: 209 SKLTCERDVFLSAFS-PKAKGKNASLALGKSVGFPRFTVAGAKPSFFSLRVKQELGERDT 33
SK TC +DVF SA S P AKG+ ASL+ G S+GFPR VAGAKP+FF+ R++++L + T
Sbjct: 158 SKQTCAKDVFFSALSSPLAKGETASLSFGSSLGFPRIAVAGAKPAFFAPRMREKLIGKKT 217
Query: 32 FSLADVQKWK 3
FSL +++KW+
Sbjct: 218 FSLCEIRKWR 227
>ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209954165|emb|CAQ77612.1|
ribosomal protein L2 [Vitis vinifera]
gi|239764759|gb|ACS15228.1| ribosomal protein L2 [Vitis
vinifera]
Length = 334
Score = 133 bits (335), Expect = 5e-29
Identities = 68/94 (72%), Positives = 78/94 (82%)
Frame = -3
Query: 685 STTGRSLGEYRRQFTKSKGKSAGRNSAGRITIFHRGGGAKRLQRKIDMKRITSSTGIVEK 506
S GR+L RQFT S GKSAGRNS+GRIT+FHRGGG+KRLQR+ID+KR TSS GIVE
Sbjct: 4 SQEGRAL----RQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVEW 59
Query: 505 IDYDPNRSSRVALVRWTDGVQLSHRRKSNTIEEF 404
I+YDPNRSSR+A VRW +GVQL +RK NTIEEF
Sbjct: 60 IEYDPNRSSRIAPVRWIEGVQLRRQRKCNTIEEF 93
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/76 (55%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = -2
Query: 227 SSNTRDSKLTCERDVFLSAFS-PKAKGKNASLALGKSVGFPRFTVAGAKPSFFSLRVKQE 51
+S SK TC +DVF SAFS PKAKG+ +SL+ G S GFPR VAGAKP+FF+ R++++
Sbjct: 154 TSKGAGSKKTCAKDVFFSAFSSPKAKGETSSLSFGSSFGFPRIAVAGAKPAFFAPRMREK 213
Query: 50 LGERDTFSLADVQKWK 3
L ++TFSL +V+KW+
Sbjct: 214 LRGKNTFSLCEVRKWR 229
>emb|CAN61455.1| hypothetical protein VITISV_029794 [Vitis vinifera]
Length = 336
Score = 133 bits (335), Expect = 5e-29
Identities = 68/94 (72%), Positives = 78/94 (82%)
Frame = -3
Query: 685 STTGRSLGEYRRQFTKSKGKSAGRNSAGRITIFHRGGGAKRLQRKIDMKRITSSTGIVEK 506
S GR+L RQFT S GKSAGRNS+GRIT+FHRGGG+KRLQR+ID+KR TSS GIVE
Sbjct: 4 SQEGRAL----RQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVEW 59
Query: 505 IDYDPNRSSRVALVRWTDGVQLSHRRKSNTIEEF 404
I+YDPNRSSR+A VRW +GVQL +RK NTIEEF
Sbjct: 60 IEYDPNRSSRIAPVRWIEGVQLRRQRKCNTIEEF 93
Score = 87.4 bits (215), Expect = 4e-15
Identities = 42/76 (55%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = -2
Query: 227 SSNTRDSKLTCERDVFLSAFS-PKAKGKNASLALGKSVGFPRFTVAGAKPSFFSLRVKQE 51
+S SK TC +DVF SAFS PKAKG+ +SL+ G S GFPR VAGAKP+FF+ R++++
Sbjct: 154 TSKGAGSKKTCAKDVFFSAFSSPKAKGETSSLSFGSSFGFPRIAVAGAKPAFFAPRMREK 213
Query: 50 LGERDTFSLADVQKWK 3
L ++TFSL +V+KW+
Sbjct: 214 LRGKNTFSLCEVRKWR 229
>ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|170522383|gb|ACB20493.1|
ribosomal protein L2 (mitochondrion) [Carica papaya]
Length = 335
Score = 132 bits (333), Expect = 9e-29
Identities = 67/94 (71%), Positives = 78/94 (82%)
Frame = -3
Query: 685 STTGRSLGEYRRQFTKSKGKSAGRNSAGRITIFHRGGGAKRLQRKIDMKRITSSTGIVEK 506
S GR+L RQFT S GKSAGRNS+GRIT+FHRGGG+KRLQR+ID+KR TSS GIVE+
Sbjct: 4 SQEGRAL----RQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVER 59
Query: 505 IDYDPNRSSRVALVRWTDGVQLSHRRKSNTIEEF 404
I+YDPNRSSR+A VRW +GVQL +RK TIEEF
Sbjct: 60 IEYDPNRSSRIAPVRWIEGVQLRRQRKLKTIEEF 93
Score = 83.6 bits (205), Expect = 6e-14
Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -2
Query: 227 SSNTRDSKLTCERDVFLSAFS-PKAKGKNASLALGKSVGFPRFTVAGAKPSFFSLRVKQE 51
+S SK TC +DVF SAFS PKAKG+ ASL+ S FPR VAGAKP+FF+ R+K++
Sbjct: 154 TSKGAGSKKTCAKDVFFSAFSSPKAKGETASLSFASSFDFPRIAVAGAKPAFFAPRMKEK 213
Query: 50 LGERDTFSLADVQKWK 3
+ ++TFSL +V+KW+
Sbjct: 214 VRGKNTFSLCEVRKWR 229
>ref|XP_002333101.1| predicted protein [Populus trichocarpa] gi|222834879|gb|EEE73328.1|
predicted protein [Populus trichocarpa]
Length = 337
Score = 132 bits (332), Expect = 1e-28
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = -3
Query: 685 STTGRSLGEYRRQFTKSKGKSAGRNSAGRITIFHRGGGAKRLQRKIDMKRITSSTGIVEK 506
S GR+L RQFT GKSAGRNS+GRIT+FHRGGG+KRLQR++D+KR TSS GIVE+
Sbjct: 4 SQEGRAL----RQFTSRTGKSAGRNSSGRITVFHRGGGSKRLQRRMDLKRSTSSMGIVER 59
Query: 505 IDYDPNRSSRVALVRWTDGVQLSHRRKSNTIEEF 404
I+YDPNRSSR+ALVRW +GVQL +RK TIEEF
Sbjct: 60 IEYDPNRSSRIALVRWIEGVQLRCQRKCKTIEEF 93
Score = 88.2 bits (217), Expect = 3e-15
Identities = 42/78 (53%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = -2
Query: 233 TASSNTRDSKLTCERDVFLSAFS-PKAKGKNASLALGKSVGFPRFTVAGAKPSFFSLRVK 57
T++S SK TC +DVF SAFS PKAKG+ ASL+ G S+ FPR VAGAKP+FF+ R++
Sbjct: 154 TSTSKGAGSKKTCAKDVFFSAFSSPKAKGETASLSFGSSLSFPRIAVAGAKPAFFAPRMR 213
Query: 56 QELGERDTFSLADVQKWK 3
+++ ++TFSL +V+KW+
Sbjct: 214 EKVRGKNTFSLCEVRKWR 231