BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012036
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94471.1| unknown [Populus trichocarpa]                          388   e-105
ref|XP_002533746.1| ubiquitin fusion degradaton protein, putativ...   384   e-104
ref|XP_002299862.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_003547271.1| PREDICTED: ubiquitin fusion degradation prot...   361   1e-97
ref|NP_973557.1| ubiquitin fusion degradation UFD1-like protein ...   355   1e-95

>gb|ABK94471.1| unknown [Populus trichocarpa]
          Length = 314

 Score =  388 bits (997), Expect = e-105
 Identities = 194/306 (63%), Positives = 231/306 (75%)
 Frame = +2

Query: 95   TSAFEQNYRCYPVAFIEKAHLEKGDKVIMPPSALDRLAYLQIDYPMLFEVSNPTSGKITH 274
            +S+FEQ+YRCYPV+FI+KAHLEKGDK+IMPPSALDRLA L IDYPMLFE+ NP++G+ +H
Sbjct: 8    SSSFEQSYRCYPVSFIDKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSH 67

Query: 275  CGVLEFIADEGLIYLPYWMMENMLLHEGDIVNIKNASLLKGTFVKLQPHTKDFLDVSNPK 454
            CGVLEFIADEG+IYLPYWMMENMLL EGDIV ++N SL KGTFVKLQPHTKDFLD+SNPK
Sbjct: 68   CGVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDISNPK 127

Query: 455  AILETSLRSYSCLTTGDTIMVAYNNKKFYIDIIETKPTAAVSIIETDCEVDFAPPLDYQE 634
            AILETSLR+YSCLTTGDTIMVAYNNKK+YIDI+E KP++A+SIIETDCEVDFAPPLDY+E
Sbjct: 128  AILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVEAKPSSAISIIETDCEVDFAPPLDYKE 187

Query: 635  PEKPSKAIVSKKRQLEDQAEEEPANKIPKFNAFTGLSRRLDGKPSIEXXXXXXXXXXXXX 814
            PEKP    + +  ++  +  EEPA K+P+F+AFTG +RRLDGKP+ +             
Sbjct: 188  PEKPKS--IPRSNKIPPEGMEEPAAKMPRFSAFTGSARRLDGKPATQ------------- 232

Query: 815  XXXXXXXXXXXXXXXXXXXXXXXXLLKHHQPEAKITNGSTPSSSTSRKHCGKLVFGSNGD 994
                                     LK HQPEA+  NGS   SS S +  GKLVFGS  +
Sbjct: 233  ----------------PTASTICPALKQHQPEAE-NNGSKLLSSLSHQQSGKLVFGSTSN 275

Query: 995  QPSHGT 1012
            QP + T
Sbjct: 276  QPQNET 281


>ref|XP_002533746.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
            gi|223526334|gb|EEF28633.1| ubiquitin fusion degradaton
            protein, putative [Ricinus communis]
          Length = 315

 Score =  384 bits (987), Expect = e-104
 Identities = 192/305 (62%), Positives = 229/305 (75%), Gaps = 1/305 (0%)
 Frame = +2

Query: 95   TSAFEQNYRCYPVAFIEKAHLEKGDKVIMPPSALDRLAYLQIDYPMLFEVSNPTSGKITH 274
            +S FE++YRCYP +FI+K HLEKGDK+IMPPSALD+LA L IDYPMLFE+ NP++ ++TH
Sbjct: 8    SSMFERSYRCYPGSFIDKPHLEKGDKIIMPPSALDQLASLHIDYPMLFELRNPSAERVTH 67

Query: 275  CGVLEFIADEGLIYLPYWMMENMLLHEGDIVNIKNASLLKGTFVKLQPHTKDFLDVSNPK 454
            CGVLEF+ADEGLI+LPYWMMENMLL EGD+V +KNASL+KGT+VKLQPHT DFLD+SNPK
Sbjct: 68   CGVLEFVADEGLIFLPYWMMENMLLQEGDLVQLKNASLMKGTYVKLQPHTTDFLDISNPK 127

Query: 455  AILETSLRSYSCLTTGDTIMVAYNNKKFYIDIIETKPTAAVSIIETDCEVDFAPPLDYQE 634
            AILETSLR+YSCLTTGDTIMVAYNNKK+YIDI+ETKP+ AVSIIETDCEVDFAPPLDY+E
Sbjct: 128  AILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVETKPSPAVSIIETDCEVDFAPPLDYKE 187

Query: 635  PEKPSKAIVSKKRQLEDQAEEEPANKIPKFNAFTGLSRRLDGKPSIEXXXXXXXXXXXXX 814
            PEKPS +   +  Q   + EEEPA KIPKF+ F+G +RRLDGK S +             
Sbjct: 188  PEKPSPS--PRSNQTRPKVEEEPAKKIPKFSPFSGAARRLDGKLSTQ------------- 232

Query: 815  XXXXXXXXXXXXXXXXXXXXXXXXLLKHHQPEAKI-TNGSTPSSSTSRKHCGKLVFGSNG 991
                                    +LK HQ EA     GS PS++ SR H GKL+FGSN 
Sbjct: 233  ----------------PVAAVTEPVLKQHQSEAGTDIRGSKPSNAASRSHSGKLIFGSNA 276

Query: 992  DQPSH 1006
            +QP +
Sbjct: 277  NQPQN 281


>ref|XP_002299862.1| predicted protein [Populus trichocarpa] gi|222847120|gb|EEE84667.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  384 bits (986), Expect = e-104
 Identities = 196/306 (64%), Positives = 228/306 (74%)
 Frame = +2

Query: 95   TSAFEQNYRCYPVAFIEKAHLEKGDKVIMPPSALDRLAYLQIDYPMLFEVSNPTSGKITH 274
            +S+FEQ+YRCYPV+FI+KAHLEKGDK+IMPPSALDRLA L IDYPMLFE+ NP++G+ +H
Sbjct: 3    SSSFEQSYRCYPVSFIDKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSH 62

Query: 275  CGVLEFIADEGLIYLPYWMMENMLLHEGDIVNIKNASLLKGTFVKLQPHTKDFLDVSNPK 454
            CGVLEFIADEG+IYLPYWMMENMLL EGDIV ++N SL KGTFVKLQPHTKDFLD+SNPK
Sbjct: 63   CGVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDISNPK 122

Query: 455  AILETSLRSYSCLTTGDTIMVAYNNKKFYIDIIETKPTAAVSIIETDCEVDFAPPLDYQE 634
            AILETSLR+YSCLTTGDTIMVAYNNKK+YIDI+E KP++A+SIIETDCEVDFAPPLDY+E
Sbjct: 123  AILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVEAKPSSAISIIETDCEVDFAPPLDYKE 182

Query: 635  PEKPSKAIVSKKRQLEDQAEEEPANKIPKFNAFTGLSRRLDGKPSIEXXXXXXXXXXXXX 814
            PEKP     S K        EEPA K+P+F+AFTG +RRLDGKP+ +             
Sbjct: 183  PEKPKSIPRSNK-----IPPEEPAAKMPRFSAFTGSARRLDGKPATQ------------- 224

Query: 815  XXXXXXXXXXXXXXXXXXXXXXXXLLKHHQPEAKITNGSTPSSSTSRKHCGKLVFGSNGD 994
                                     LK HQPEA+  NGS   SS S +  GKLVFGS  +
Sbjct: 225  ----------------PTASTICPALKQHQPEAE-NNGSKLLSSLSHQQSGKLVFGSTSN 267

Query: 995  QPSHGT 1012
            QP + T
Sbjct: 268  QPQNET 273


>ref|XP_003547271.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
           max]
          Length = 318

 Score =  361 bits (927), Expect = 1e-97
 Identities = 181/298 (60%), Positives = 217/298 (72%), Gaps = 1/298 (0%)
 Frame = +2

Query: 98  SAFEQNYRCYPVAFIEKAHLEKGDKVIMPPSALDRLAYLQIDYPMLFEVSNPTSGKITHC 277
           + FEQ YRCYPV+FIEK  LEKGDK+IMPPSALDRLA L I+YPMLF++ NP++ ++THC
Sbjct: 10  ATFEQFYRCYPVSFIEKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSAERVTHC 69

Query: 278 GVLEFIADEGLIYLPYWMMENMLLHEGDIVNIKNASLLKGTFVKLQPHTKDFLDVSNPKA 457
           GVLEF++DEG+IY+PYWMMENMLL EGDIV +KN +L KGT+VKLQPHTKDFLD+SNPKA
Sbjct: 70  GVLEFVSDEGIIYIPYWMMENMLLQEGDIVKVKNTNLAKGTYVKLQPHTKDFLDISNPKA 129

Query: 458 ILETSLRSYSCLTTGDTIMVAYNNKKFYIDIIETKPTAAVSIIETDCEVDFAPPLDYQEP 637
           ILET+LRSYSCLTTGDTIMV YNNKK+YIDI+ETKP+ AVSIIETDCEVDFAPPLDY+EP
Sbjct: 130 ILETTLRSYSCLTTGDTIMVPYNNKKYYIDIVETKPSPAVSIIETDCEVDFAPPLDYKEP 189

Query: 638 EKPSKAIVSKKRQLEDQAEEEPANKIPKFNAFTGLSRRLDGKPSIEXXXXXXXXXXXXXX 817
           EK +K +V  +++   + E+EP  KI +   FTG  RRLDGKPS                
Sbjct: 190 EKQAKPVVFDRKR--PKVEDEPPTKIARLTPFTGSGRRLDGKPSAPSVEQTSSPE----- 242

Query: 818 XXXXXXXXXXXXXXXXXXXXXXXLLKHHQPEAKITNGSTPSSST-SRKHCGKLVFGSN 988
                                   LK  Q + +I    + SS+T SR+H GKLVFGSN
Sbjct: 243 ------------------------LKQRQTDKEIKGSDSKSSNTVSRRHSGKLVFGSN 276


>ref|NP_973557.1| ubiquitin fusion degradation UFD1-like protein [Arabidopsis thaliana]
            gi|44917441|gb|AAS49045.1| At2g29070 [Arabidopsis
            thaliana] gi|45773886|gb|AAS76747.1| At2g29070
            [Arabidopsis thaliana] gi|111609944|gb|ABH11522.1| UFD1c
            [synthetic construct] gi|330253112|gb|AEC08206.1|
            ubiquitin fusion degradation UFD1-like protein
            [Arabidopsis thaliana]
          Length = 312

 Score =  355 bits (911), Expect = 1e-95
 Identities = 177/306 (57%), Positives = 216/306 (70%)
 Frame = +2

Query: 98   SAFEQNYRCYPVAFIEKAHLEKGDKVIMPPSALDRLAYLQIDYPMLFEVSNPTSGKITHC 277
            S+FEQ YRCYPV FI+KAHLEKGDK+IMPPSALDRLA L I+YPMLF++SN +  K +HC
Sbjct: 6    SSFEQCYRCYPVTFIDKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSHC 65

Query: 278  GVLEFIADEGLIYLPYWMMENMLLHEGDIVNIKNASLLKGTFVKLQPHTKDFLDVSNPKA 457
            GVLEF ADEGL+YLPYWMM+NM L EGD++ +KN SL+KGT++KLQPHT+DFLD+SNPKA
Sbjct: 66   GVLEFTADEGLVYLPYWMMQNMSLEEGDVMQVKNISLVKGTYIKLQPHTQDFLDISNPKA 125

Query: 458  ILETSLRSYSCLTTGDTIMVAYNNKKFYIDIIETKPTAAVSIIETDCEVDFAPPLDYQEP 637
            ILET+LRSYSCLTTGDTIMV YNNK++YI+++E KP++AVSIIETDCEVDFAPPLDY+EP
Sbjct: 126  ILETTLRSYSCLTTGDTIMVPYNNKQYYINVVEAKPSSAVSIIETDCEVDFAPPLDYKEP 185

Query: 638  EKPSKAIVSKKRQLEDQAEEEPANKIPKFNAFTGLSRRLDGKPSIEXXXXXXXXXXXXXX 817
            EKP K   S KR L+ + EEEPA+K+PKF  FTG  +RLDGK   +              
Sbjct: 186  EKPQKLTPSNKRPLQVKEEEEPASKVPKFTPFTGSGKRLDGKAQTQTEPEDTK------- 238

Query: 818  XXXXXXXXXXXXXXXXXXXXXXXLLKHHQPEAKITNGSTPSSSTSRKHCGKLVFGSNGDQ 997
                                     +  +P     +    S +T R+  GKLVFGSN   
Sbjct: 239  -------------------------QQEKPTENGKDDEKLSVTTPRQISGKLVFGSNSKS 273

Query: 998  PSHGTA 1015
             +  TA
Sbjct: 274  AAKETA 279