BLASTX nr result

ID: Bupleurum21_contig00012034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012034
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517275.1| DNA binding protein, putative [Ricinus commu...   266   4e-69
ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256...   254   2e-65
emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]   254   2e-65
ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|2...   249   4e-64
ref|XP_004173296.1| PREDICTED: uncharacterized protein LOC101223...   248   1e-63

>ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
           gi|223543538|gb|EEF45068.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 315

 Score =  266 bits (681), Expect = 4e-69
 Identities = 151/260 (58%), Positives = 165/260 (63%), Gaps = 22/260 (8%)
 Frame = +1

Query: 1   PSPDELMPISQTLITPHLAIAFDXXXXXXXXXXXXXXXXPPALVPQLNHNIQAPLQLSNP 180
           PSP+ELMP+SQTLITP LAIAFD                PP   P ++ N  +P   +NP
Sbjct: 17  PSPEELMPLSQTLITPDLAIAFDIRNPTTNQQNQPIPPPPPP--PPISTNTLSP---TNP 71

Query: 181 LQS--PNSGEFDSSELXXXXXXXXDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP 354
           L S  PNS E+ +           DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP
Sbjct: 72  LLSSQPNSAEYAADSADLGSAGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP 131

Query: 355 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGL-----------XXXXXXXXXXXXXTD 501
           KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGL                        T+
Sbjct: 132 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGAAGVNGSAGGGGGAAASDAATE 191

Query: 502 HLFASSPVPAHFLHQGRPNSEHFMPFVPV----XXXXXXXXXXXXXXXXXHPQ-----YR 654
           HLFASSPVPAHFLH GRPNS+HF+PFVPV                     HPQ     +R
Sbjct: 192 HLFASSPVPAHFLHPGRPNSDHFLPFVPVAALQHHHHQQQMAAAAAAAVAHPQLQSQYHR 251

Query: 655 HVGHFGSPPNGQFEHPFLAR 714
            +GHFGSPPNGQF+HPFLAR
Sbjct: 252 QMGHFGSPPNGQFDHPFLAR 271


>ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
           vinifera] gi|359481436|ref|XP_003632618.1| PREDICTED:
           uncharacterized protein LOC100256764 isoform 2 [Vitis
           vinifera]
          Length = 306

 Score =  254 bits (649), Expect = 2e-65
 Identities = 151/262 (57%), Positives = 160/262 (61%), Gaps = 24/262 (9%)
 Frame = +1

Query: 1   PSPDELMPISQTLITPHLAIAFDXXXXXXXXXXXXXXXXPPALVPQLNHNIQAPLQLSNP 180
           PSP+ELMP+SQTLITP LA+AFD                PP   PQ+     AP   S P
Sbjct: 17  PSPEELMPLSQTLITPDLALAFDIRNPNSPQAPP-----PPLPTPQV-----APPPPSQP 66

Query: 181 LQSPNSGEFDSSELXXXXXXXXDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 360
             +P   EFDS +L        DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT
Sbjct: 67  NSAP---EFDSGDLGSGAAG--DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 121

Query: 361 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGL------------XXXXXXXXXXXXXTDH 504
           IMQLMSVDGLTRENVASHLQKYRLYLKRMQGL                         TDH
Sbjct: 122 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAAADPATDH 181

Query: 505 LFASSPVPAHFLHQGRPNSEHFMPFVPV-----XXXXXXXXXXXXXXXXXHPQ------- 648
           LFASSPVP HFLH GR +SEHF+PFVPV                      HPQ       
Sbjct: 182 LFASSPVPPHFLHPGRASSEHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQLQTQYHH 241

Query: 649 YRHVGHFGSPPNGQFEHPFLAR 714
           +R VGHFGSPPNGQFEHPFL R
Sbjct: 242 HRQVGHFGSPPNGQFEHPFLPR 263


>emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]
          Length = 306

 Score =  254 bits (649), Expect = 2e-65
 Identities = 151/262 (57%), Positives = 160/262 (61%), Gaps = 24/262 (9%)
 Frame = +1

Query: 1   PSPDELMPISQTLITPHLAIAFDXXXXXXXXXXXXXXXXPPALVPQLNHNIQAPLQLSNP 180
           PSP+ELMP+SQTLITP LA+AFD                PP   PQ+     AP   S P
Sbjct: 17  PSPEELMPLSQTLITPDLALAFDIRNPNSPQAPT-----PPLPTPQV-----APPPPSQP 66

Query: 181 LQSPNSGEFDSSELXXXXXXXXDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 360
             +P   EFDS +L        DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT
Sbjct: 67  NSAP---EFDSGDLGSGAAG--DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 121

Query: 361 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGL------------XXXXXXXXXXXXXTDH 504
           IMQLMSVDGLTRENVASHLQKYRLYLKRMQGL                         TDH
Sbjct: 122 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAAADPATDH 181

Query: 505 LFASSPVPAHFLHQGRPNSEHFMPFVPV-----XXXXXXXXXXXXXXXXXHPQ------- 648
           LFASSPVP HFLH GR +SEHF+PFVPV                      HPQ       
Sbjct: 182 LFASSPVPPHFLHPGRASSEHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQLQTQYHH 241

Query: 649 YRHVGHFGSPPNGQFEHPFLAR 714
           +R VGHFGSPPNGQFEHPFL R
Sbjct: 242 HRQVGHFGSPPNGQFEHPFLPR 263


>ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|222872755|gb|EEF09886.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  249 bits (637), Expect = 4e-64
 Identities = 151/276 (54%), Positives = 162/276 (58%), Gaps = 38/276 (13%)
 Frame = +1

Query: 1   PSPDELMPISQTLITPHLAIAFDXXXXXXXXXXXXXXXXPPALVPQLNHNIQ-------- 156
           PS +ELMP+SQTLITP LA+AFD                P       NHN          
Sbjct: 17  PSLEELMPLSQTLITPDLALAFD-------------ITNPTNTTNTNNHNSSLHQNQPLP 63

Query: 157 ----APLQLS----NPLQS--PNSGEFDSSELXXXXXXXXDEPARTLKRPRLVWTPQLHK 306
                P  +S    NPL S  PNSG+F +           DEPARTLKRPRLVWTPQLHK
Sbjct: 64  PPPPPPAAVSPTPTNPLASPQPNSGDFATDSGELGSGAGGDEPARTLKRPRLVWTPQLHK 123

Query: 307 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGL---------- 456
           RFVDAVAHLGIKNAVPKTIMQLM+VDGLTRENVASHLQKYRLYLKRMQGL          
Sbjct: 124 RFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGPGNG 183

Query: 457 --XXXXXXXXXXXXXTDHLFASSPVPAHFLHQGRPNSEHFMPFVPV---XXXXXXXXXXX 621
                          TDHLFASSPVPAHFLH GRPNS+HF+PFVPV              
Sbjct: 184 AVGGGGGLTGGSDAATDHLFASSPVPAHFLHPGRPNSDHFLPFVPVAALQQHHHQQQMAA 243

Query: 622 XXXXXXHPQ-----YRHVGHFGSPPNGQFEHPFLAR 714
                 HPQ     +R +GHFGSP NGQFEHPFLAR
Sbjct: 244 AAAAVGHPQLQGQYHRPMGHFGSPTNGQFEHPFLAR 279


>ref|XP_004173296.1| PREDICTED: uncharacterized protein LOC101223526, partial [Cucumis
           sativus]
          Length = 285

 Score =  248 bits (634), Expect = 1e-63
 Identities = 146/254 (57%), Positives = 160/254 (62%), Gaps = 16/254 (6%)
 Frame = +1

Query: 1   PSPDELMPISQTLITPHLAIAFDXXXXXXXXXXXXXXXXPPALVPQLNHNIQAPLQLS-N 177
           PSPDELMP+SQTLITP LA+AFD                PP   P  +  +  PL  S N
Sbjct: 1   PSPDELMPLSQTLITPDLALAFDIQNPSNSS--------PPLPCP--SPPLSNPLPGSGN 50

Query: 178 PLQSPNSGEF-DSSELXXXXXXXXDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP 354
            +  PNS +F DS++L        DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP
Sbjct: 51  GIVPPNSADFGDSADLGSGAAS--DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP 108

Query: 355 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGL-----XXXXXXXXXXXXXTDHLFASS 519
           KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGL                  TDHLFASS
Sbjct: 109 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHLFASS 168

Query: 520 PVPAHFLHQGRPNSEHFMPFVPV---------XXXXXXXXXXXXXXXXXHPQYRHVGHFG 672
           PVP H LH  R +S+HF+P+VP+                           P +R VGHFG
Sbjct: 169 PVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQVGHFG 228

Query: 673 SPPNGQFEHPFLAR 714
           SPPNGQFEHPFLAR
Sbjct: 229 SPPNGQFEHPFLAR 242


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