BLASTX nr result

ID: Bupleurum21_contig00012028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012028
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicu...    49   5e-12
ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cuc...    48   9e-12
ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vi...    48   9e-12
ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, par...    48   9e-12
ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Bra...    47   1e-11

>ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
           gi|299118178|gb|ADJ10892.1| auxin response factor 1
           [Solanum lycopersicum]
          Length = 654

 Score = 48.9 bits (115), Expect(2) = 5e-12
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = -2

Query: 195 KPRRHLLTTGWSVFVSAKKLVAG 127
           +PRRHLLTTGWSVFVSAKKLVAG
Sbjct: 187 QPRRHLLTTGWSVFVSAKKLVAG 209



 Score = 46.6 bits (109), Expect(2) = 5e-12
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -1

Query: 127 GDNGELRVGVRRLMRQLYNMPSSVM 53
           GD+GELRVGVRRLMRQL NMPSSV+
Sbjct: 217 GDSGELRVGVRRLMRQLNNMPSSVI 241


>ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
          Length = 739

 Score = 47.8 bits (112), Expect(2) = 9e-12
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = -2

Query: 195 KPRRHLLTTGWSVFVSAKKLVAG 127
           +PRRHLLTTGWSVFVS+KKLVAG
Sbjct: 248 QPRRHLLTTGWSVFVSSKKLVAG 270



 Score = 47.0 bits (110), Expect(2) = 9e-12
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -1

Query: 127 GDNGELRVGVRRLMRQLYNMPSSVM 53
           G+NGELRVGVRRLMRQL NMPSSV+
Sbjct: 278 GENGELRVGVRRLMRQLNNMPSSVI 302


>ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
           gi|297739458|emb|CBI29640.3| unnamed protein product
           [Vitis vinifera]
          Length = 678

 Score = 47.8 bits (112), Expect(2) = 9e-12
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = -2

Query: 195 KPRRHLLTTGWSVFVSAKKLVAG 127
           +PRRHLLTTGWSVFVS+KKLVAG
Sbjct: 187 QPRRHLLTTGWSVFVSSKKLVAG 209



 Score = 47.0 bits (110), Expect(2) = 9e-12
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -1

Query: 127 GDNGELRVGVRRLMRQLYNMPSSVM 53
           G+NGELRVGVRRLMRQL NMPSSV+
Sbjct: 217 GENGELRVGVRRLMRQLSNMPSSVI 241


>ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
          Length = 335

 Score = 47.8 bits (112), Expect(2) = 9e-12
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = -2

Query: 195 KPRRHLLTTGWSVFVSAKKLVAG 127
           +PRRHLLTTGWSVFVS+KKLVAG
Sbjct: 186 QPRRHLLTTGWSVFVSSKKLVAG 208



 Score = 47.0 bits (110), Expect(2) = 9e-12
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -1

Query: 127 GDNGELRVGVRRLMRQLYNMPSSVM 53
           G+NGELRVGVRRLMRQL NMPSSV+
Sbjct: 216 GENGELRVGVRRLMRQLNNMPSSVI 240


>ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
          Length = 672

 Score = 47.4 bits (111), Expect(2) = 1e-11
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -1

Query: 127 GDNGELRVGVRRLMRQLYNMPSSVM 53
           GDNG+LRVGVRRLMRQL NMPSSV+
Sbjct: 211 GDNGDLRVGVRRLMRQLNNMPSSVI 235



 Score = 46.6 bits (109), Expect(2) = 1e-11
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = -2

Query: 195 KPRRHLLTTGWSVFVSAKKLVAG 127
           +PRRHLLTTGWSVFVS+K+LVAG
Sbjct: 181 QPRRHLLTTGWSVFVSSKRLVAG 203


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