BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012024
         (1961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15328.3| unnamed protein product [Vitis vinifera]              630   e-178
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...   628   e-177
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi...   599   e-169
ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|2...   599   e-169
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...   596   e-168

>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  630 bits (1624), Expect = e-178
 Identities = 331/535 (61%), Positives = 397/535 (74%), Gaps = 4/535 (0%)
 Frame = +3

Query: 51   MPRPSTPLTPLHLRTILRRV---SSATXXXXXXXXXXXXXXXXXXXXXXXXXPHFLSLKS 221
            M R STPLT L LR +L R    SS++                         P+ L    
Sbjct: 1    MWRSSTPLTSLQLRRLLLRCFSSSSSSSSSSSSSSSSSLVQSYCLSPTLSLDPYCLCSSQ 60

Query: 222  LPQNXXXXXXXXXXXXVPQNQ-ENEEEKIAESLSTELNKESSSETSISLPQRLDLSFSHI 398
                             P N  +++  +IA+SLS+EL K+  SE  + + QRL LSFSHI
Sbjct: 61   RHFVSPSFPLSRRFSSQPNNSADDDHSQIAQSLSSELLKDPDSEP-VPIIQRLQLSFSHI 119

Query: 399  ELTPKIIHYTLNLSPNAGRSILGFFKWVSSRSNFDVTDEIVSYFVDYFGRRKDFKAINEV 578
              +P +I  TLN SP+AGR++LGF+KW+SS   F  +DE +S+FVDYFGRRKDFKAI+EV
Sbjct: 120  TPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEV 179

Query: 579  LGESRGVVGDIVMGACIDRLVRAGRPTQVVSFFETMEKDYGFVRNLDSLKLVVAKLCDHG 758
            L + R   G   + + IDRLVRAGR TQVVSFF+ ME DYGF R+ +SL +VV+KLC+HG
Sbjct: 180  LMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHG 239

Query: 759  FASYAEKMVKSLANEFFPDEYVCDLLIKGWCVDKKLDEAKRLAGEMQRGGFEIGAVAYNA 938
            FAS+AEK+VK++ANE FP+E +CDLLIKGWCVD KLDEA+RLA EM RGGFEIG +AYN+
Sbjct: 240  FASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGTMAYNS 299

Query: 939  MLDCVCKLCREKDPFRLQSEAENVLVEMDVAGVPRNVETFNVLITNLCKIRRTEDAMNLF 1118
            +LDC+CKLCR+KDPFRL+SEAE +LV+MDVAGVPRNVETFNVLITNLCKIR+TEDAM LF
Sbjct: 300  ILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTEDAMKLF 359

Query: 1119 YRMGEWGCNPDETTFLVLIKSLYQAARVGEGDEMIDRMKSAGFGDALNKKAYYEFLKILC 1298
            YRMGEWGC P+ETTFLVL +SLYQAARVGEGDEMIDRMKSAGFG+AL+KKAYYEF+KILC
Sbjct: 360  YRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYEFIKILC 419

Query: 1299 GIERIEHAMSVFAKMKEDGCKPGTKTYDLLIKKLCAHGKHEKANALFKEADNDGILAIPP 1478
            GIERI+HAMS+F+KMKEDGCKPG KTYDLL+ KLCAHG+ +KANALF EA N G+  +  
Sbjct: 420  GIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRGV-PVES 478

Query: 1479 KAYKVDPRYXXXXXXXXXXXXXXXLPEKMARKRSTLKKIRLSFVKKPKKRSTRAY 1643
            KAYK+DPR+               LPEKMARKR  L+KIRLSFVKKP KR  RA+
Sbjct: 479  KAYKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKP-KRMRRAF 532


>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Vitis vinifera]
          Length = 516

 Score =  628 bits (1620), Expect = e-177
 Identities = 315/458 (68%), Positives = 377/458 (82%), Gaps = 1/458 (0%)
 Frame = +3

Query: 273  PQNQ-ENEEEKIAESLSTELNKESSSETSISLPQRLDLSFSHIELTPKIIHYTLNLSPNA 449
            P N  +++  +IA+SLS+EL K+  SE  + + QRL LSFSHI  +P +I  TLN SP+A
Sbjct: 62   PNNSADDDHSQIAQSLSSELLKDPDSEP-VPIIQRLQLSFSHITPSPPLILQTLNTSPDA 120

Query: 450  GRSILGFFKWVSSRSNFDVTDEIVSYFVDYFGRRKDFKAINEVLGESRGVVGDIVMGACI 629
            GR++LGF+KW+SS   F  +DE +S+FVDYFGRRKDFKAI+EVL + R   G   + + I
Sbjct: 121  GRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAI 180

Query: 630  DRLVRAGRPTQVVSFFETMEKDYGFVRNLDSLKLVVAKLCDHGFASYAEKMVKSLANEFF 809
            DRLVRAGR TQVVSFF+ ME DYGF R+ +SL +VV+KLC+HGFAS+AEK+VK++ANE F
Sbjct: 181  DRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIF 240

Query: 810  PDEYVCDLLIKGWCVDKKLDEAKRLAGEMQRGGFEIGAVAYNAMLDCVCKLCREKDPFRL 989
            P+E +CDLLIKGWCVD KLDEA+RLA EM RGGFEIG +AYN++LDC+CKLCR+KDPFRL
Sbjct: 241  PNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRL 300

Query: 990  QSEAENVLVEMDVAGVPRNVETFNVLITNLCKIRRTEDAMNLFYRMGEWGCNPDETTFLV 1169
            +SEAE +LV+MDVAGVPRNVETFNVLITNLCKIR+TEDAM LFYRMGEWGC P+ETTFLV
Sbjct: 301  ESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLV 360

Query: 1170 LIKSLYQAARVGEGDEMIDRMKSAGFGDALNKKAYYEFLKILCGIERIEHAMSVFAKMKE 1349
            L +SLYQAARVGEGDEMIDRMKSAGFG+AL+KKAYYEF+KILCGIERI+HAMS+F+KMKE
Sbjct: 361  LTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKE 420

Query: 1350 DGCKPGTKTYDLLIKKLCAHGKHEKANALFKEADNDGILAIPPKAYKVDPRYXXXXXXXX 1529
            DGCKPG KTYDLL+ KLCAHG+ +KANALF EA N G+  +  KAYK+DPR+        
Sbjct: 421  DGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRGV-PVESKAYKLDPRFVKKPTVAK 479

Query: 1530 XXXXXXXLPEKMARKRSTLKKIRLSFVKKPKKRSTRAY 1643
                   LPEKMARKR  L+KIRLSFVKKP KR  RA+
Sbjct: 480  KEKKRETLPEKMARKRRRLRKIRLSFVKKP-KRMRRAF 516


>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
            gi|449477122|ref|XP_004154936.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
          Length = 522

 Score =  599 bits (1545), Expect = e-169
 Identities = 289/456 (63%), Positives = 361/456 (79%)
 Frame = +3

Query: 276  QNQENEEEKIAESLSTELNKESSSETSISLPQRLDLSFSHIELTPKIIHYTLNLSPNAGR 455
            ++  N  ++ ++SL++EL K+  S+  + + QRL LSFSH++  P+++  TLNLS  AGR
Sbjct: 69   ESVNNHVDQTSQSLASELLKDPDSDP-LPITQRLQLSFSHVKPNPELVRNTLNLSSEAGR 127

Query: 456  SILGFFKWVSSRSNFDVTDEIVSYFVDYFGRRKDFKAINEVLGESRGVVGDIVMGACIDR 635
            ++LGF +W+ S  +F  TDE +SYFVD+FGRRKDF A+ EVL +  G+ G   + + I R
Sbjct: 128  TVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKTLKSSIHR 187

Query: 636  LVRAGRPTQVVSFFETMEKDYGFVRNLDSLKLVVAKLCDHGFASYAEKMVKSLANEFFPD 815
              RAGRPT+++SFFETME +YG  R+ +SL++VV KLC++GF S+AEKMVK LANEFFPD
Sbjct: 188  FARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDLANEFFPD 247

Query: 816  EYVCDLLIKGWCVDKKLDEAKRLAGEMQRGGFEIGAVAYNAMLDCVCKLCREKDPFRLQS 995
            E +CD LIKGWCV++KLDEAKRLAGEM RGGFE+G  AYNA+LDCVCKLCR+KDPFRL S
Sbjct: 248  EAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLDS 307

Query: 996  EAENVLVEMDVAGVPRNVETFNVLITNLCKIRRTEDAMNLFYRMGEWGCNPDETTFLVLI 1175
            EAE +LVEMD  GVPRNVETFNVLI NLCKIRRT DA+NLF+RMGEWGC+P+  TFL+LI
Sbjct: 308  EAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNAETFLILI 367

Query: 1176 KSLYQAARVGEGDEMIDRMKSAGFGDALNKKAYYEFLKILCGIERIEHAMSVFAKMKEDG 1355
            +SLYQAAR GEGDEMIDRMKS G+GDAL+KKAYYEF+ ILCGIERI+HA+ VFAKMK+DG
Sbjct: 368  RSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDG 427

Query: 1356 CKPGTKTYDLLIKKLCAHGKHEKANALFKEADNDGILAIPPKAYKVDPRYXXXXXXXXXX 1535
            C+PG KTYDLL+ KLCAH + +KAN+LF EA   G+  + PKAY+VDP+Y          
Sbjct: 428  CEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGV-PVTPKAYQVDPKYVKKPKDKKVA 486

Query: 1536 XXXXXLPEKMARKRSTLKKIRLSFVKKPKKRSTRAY 1643
                 LPEKMARKR  LK+IRLSFVKKP++   RA+
Sbjct: 487  KKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 522


>ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|222844657|gb|EEE82204.1|
            predicted protein [Populus trichocarpa]
          Length = 516

 Score =  599 bits (1545), Expect = e-169
 Identities = 297/460 (64%), Positives = 362/460 (78%), Gaps = 4/460 (0%)
 Frame = +3

Query: 273  PQNQENEEEKIAESLSTELNKESSSETSISLPQRLDLSFSHIE----LTPKIIHYTLNLS 440
            P   E+ +  I +SLSTE++++ +++  +S+ +RL LSFSH+     LTP ++  TL LS
Sbjct: 58   PNAIESPDPAIVQSLSTEISRDPNTDP-LSISERLHLSFSHLTKNNALTPSLVLQTLKLS 116

Query: 441  PNAGRSILGFFKWVSSRSNFDVTDEIVSYFVDYFGRRKDFKAINEVLGESRGVVGDIVMG 620
            P+AGR+++GF  W+   +NF+  DE ++ FVDYFGRRKDFKA +++L E + V G     
Sbjct: 117  PDAGRTVIGFHNWLIKDANFEQNDESLALFVDYFGRRKDFKAAHDLLVEGKSVAGVKCFE 176

Query: 621  ACIDRLVRAGRPTQVVSFFETMEKDYGFVRNLDSLKLVVAKLCDHGFASYAEKMVKSLAN 800
            + IDRLVRAGR TQV+ FFE ME+DYGF R+ +SL  VV KLC++G+ASYAEKMVK+LAN
Sbjct: 177  SMIDRLVRAGRTTQVIGFFERMERDYGFKRDKESLTFVVQKLCENGYASYAEKMVKNLAN 236

Query: 801  EFFPDEYVCDLLIKGWCVDKKLDEAKRLAGEMQRGGFEIGAVAYNAMLDCVCKLCREKDP 980
            E FPD+ +CDLLIKGWCVD KL+EAKRLAGEM RGGFEIG +A+NAMLDCVCKLCREKDP
Sbjct: 237  EIFPDDGICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEIGTMAFNAMLDCVCKLCREKDP 296

Query: 981  FRLQSEAENVLVEMDVAGVPRNVETFNVLITNLCKIRRTEDAMNLFYRMGEWGCNPDETT 1160
            FRL+SE E VL+EMD+ GVPRNVETFNVLI+NLCK+RRTEDAM LF R+GEWGC PDETT
Sbjct: 297  FRLESEVEKVLMEMDIRGVPRNVETFNVLISNLCKVRRTEDAMKLFSRIGEWGCCPDETT 356

Query: 1161 FLVLIKSLYQAARVGEGDEMIDRMKSAGFGDALNKKAYYEFLKILCGIERIEHAMSVFAK 1340
            FLVLI+SLYQAARVGEGDEMIDRMKSAG+GD L+KKAYY FLKILCGIER+EHAMSVF  
Sbjct: 357  FLVLIRSLYQAARVGEGDEMIDRMKSAGYGDKLDKKAYYGFLKILCGIERLEHAMSVFEM 416

Query: 1341 MKEDGCKPGTKTYDLLIKKLCAHGKHEKANALFKEADNDGILAIPPKAYKVDPRYXXXXX 1520
            MK DGCKPG KTYDLL+ K C H + +KAN L+ EA ++G+  + PK Y+VDP++     
Sbjct: 417  MKADGCKPGIKTYDLLMGKWCTHNRLDKANVLYNEALSNGV-TVTPKEYRVDPKFMKKPK 475

Query: 1521 XXXXXXXXXXLPEKMARKRSTLKKIRLSFVKKPKKRSTRA 1640
                      LPEKMARKR  LK+IRLSFVKKPKK   RA
Sbjct: 476  AVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRA 515


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  596 bits (1536), Expect = e-168
 Identities = 299/460 (65%), Positives = 364/460 (79%), Gaps = 3/460 (0%)
 Frame = +3

Query: 273  PQNQENEEEK-IAESLSTELNKESSSETSISLPQRLDLSFSHIE--LTPKIIHYTLNLSP 443
            P N   E+   IA+S+S EL K  +S+ S+S+ QRL+L FSHI   +TP II  TLNLSP
Sbjct: 112  PNNNVLEDPNPIAQSISAELIKNPNSD-SLSILQRLNLHFSHINNSITPSIILQTLNLSP 170

Query: 444  NAGRSILGFFKWVSSRSNFDVTDEIVSYFVDYFGRRKDFKAINEVLGESRGVVGDIVMGA 623
            +AGR++LGF +W+   +NF  TDE +S+F+DYFGRRKDF++ +E+L +S+ V+G     +
Sbjct: 171  DAGRTVLGFHQWLVKVANFKNTDETISFFIDYFGRRKDFQSTHELLCDSKDVIGYKCFES 230

Query: 624  CIDRLVRAGRPTQVVSFFETMEKDYGFVRNLDSLKLVVAKLCDHGFASYAEKMVKSLANE 803
             ++RLVRAGR T+V+ FF+ ME+DYGF R+ ++L+LVV  LCD+G+ASYAEKMVK+LANE
Sbjct: 231  MVNRLVRAGRATKVMGFFDRMERDYGFKRDRENLRLVVKMLCDNGYASYAEKMVKNLANE 290

Query: 804  FFPDEYVCDLLIKGWCVDKKLDEAKRLAGEMQRGGFEIGAVAYNAMLDCVCKLCREKDPF 983
             FPDE +CDLLIKGWCVD KLDEAKRLAGEM RGGFEIG VAYNA+LDCVCKLCREKDPF
Sbjct: 291  IFPDENICDLLIKGWCVDGKLDEAKRLAGEMYRGGFEIGTVAYNAILDCVCKLCREKDPF 350

Query: 984  RLQSEAENVLVEMDVAGVPRNVETFNVLITNLCKIRRTEDAMNLFYRMGEWGCNPDETTF 1163
            +++SE E VLVEMD  GVPRNVETFNVLITNLCK+R+T+DA+NLF RM EWGC+PD+TTF
Sbjct: 351  KIESEVEKVLVEMDTRGVPRNVETFNVLITNLCKMRKTQDALNLFNRMREWGCDPDDTTF 410

Query: 1164 LVLIKSLYQAARVGEGDEMIDRMKSAGFGDALNKKAYYEFLKILCGIERIEHAMSVFAKM 1343
            LVLI+SLYQAARVGEGDEMIDRMKS+G+G+ L+KKAYY FLKILCGIER+EHA+SVF  M
Sbjct: 411  LVLIRSLYQAARVGEGDEMIDRMKSSGYGNKLDKKAYYGFLKILCGIERLEHAVSVFEMM 470

Query: 1344 KEDGCKPGTKTYDLLIKKLCAHGKHEKANALFKEADNDGILAIPPKAYKVDPRYXXXXXX 1523
            K DGCKPG KTYDLLI K C   + +K NALF EA  +G+  + PK YKVD +Y      
Sbjct: 471  KADGCKPGIKTYDLLIGKWCTRNRVDKGNALFNEALRNGV-PVAPKEYKVDEKYMKKPKA 529

Query: 1524 XXXXXXXXXLPEKMARKRSTLKKIRLSFVKKPKKRSTRAY 1643
                     LPEKMARKR  LK+IRLSFVKKPKK   R +
Sbjct: 530  VKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKMMRRPF 569