BLASTX nr result

ID: Bupleurum21_contig00012014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012014
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g2942...    69   4e-10
ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata sub...    67   1e-09
gb|EEE54040.1| hypothetical protein OsJ_00720 [Oryza sativa Japo...    66   3e-09
gb|EEC70099.1| hypothetical protein OsI_00744 [Oryza sativa Indi...    66   3e-09

>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281 TLKDVGMRDSHLSKLMKCLPCLEVLNWIDIRA-SDPEIHHLNLKELKWTISKCESPPEEL 105
           TL+ + + D +LSK+  C PCL+VLN + +    +P+IH  +L+  +WT+S   +     
Sbjct: 187 TLESIRLDDENLSKVNHCFPCLKVLNLVGVGGLREPKIHLYHLRTCRWTVSNAPN----- 241

Query: 104 SSLTIYAPNLAKLELECDDPIALSIDAPLLSYFH 3
            SL+I+APNL KLEL C +P +L ++ PLLS F+
Sbjct: 242 -SLSIFAPNLLKLELNCIEPRSLILETPLLSDFY 274


>ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus] gi|449503313|ref|XP_004161940.1| PREDICTED:
           F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus]
          Length = 449

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281 TLKDVGMRDSHLSKLMKCLPCLEVLNWIDIRA-SDPEIHHLNLKELKWTISKCESPPEEL 105
           TL+ + + D  LS+L    P LEVLN I +   ++P+I  L+LK  KWT+S         
Sbjct: 182 TLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPV----- 236

Query: 104 SSLTIYAPNLAKLELECDDPIALSIDAPLLSYFH 3
            SL IYAP+L+KLEL+C  P  L I+ P+LS FH
Sbjct: 237 -SLCIYAPSLSKLELKCVKPKFLIIETPMLSDFH 269


>ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313245|gb|EFH43668.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281 TLKDVGMRDSHLSKLMKCLPCLEVLNWIDIRA-SDPEIHHLNLKELKWTISKCESPPEEL 105
           TL+ + + D +L K+  C P L+VLN I +    +P IH L+LK   WT+S         
Sbjct: 178 TLEFIRLDDENLEKVNDCFPFLQVLNLIGVGGLKEPRIHFLHLKSCHWTVSNAPL----- 232

Query: 104 SSLTIYAPNLAKLELECDDPIALSIDAPLLSYFH 3
            SL I APNL +L+L+C+ P +L ++ P L  FH
Sbjct: 233 -SLAIVAPNLLELKLKCNKPKSLILETPKLVKFH 265


>gb|EEE54040.1| hypothetical protein OsJ_00720 [Oryza sativa Japonica Group]
          Length = 261

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = -1

Query: 281 TLKDVGMRDSHLSKLMKCLPCLEVLNWIDIRA-SDPEIHHLNLKELKWTISKCESPPEEL 105
           TL+ + + D  L+KL +C PCL++LN I +    DP+IH   LK   W +S         
Sbjct: 8   TLEFIRLDDEDLNKLNECFPCLQILNLIGVGGLKDPKIHLHQLKTCHWEVSNVPR----- 62

Query: 104 SSLTIYAPNLAKLELECDDPIALSIDAP 21
            SLTI APNL +LEL+C  P  L +D P
Sbjct: 63  -SLTIRAPNLVRLELKCVRPDMLILDTP 89


>gb|EEC70099.1| hypothetical protein OsI_00744 [Oryza sativa Indica Group]
          Length = 472

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = -1

Query: 281 TLKDVGMRDSHLSKLMKCLPCLEVLNWIDIRA-SDPEIHHLNLKELKWTISKCESPPEEL 105
           TL+ + + D  L+KL +C PCL++LN I +    DP+IH   LK   W +S         
Sbjct: 219 TLEFIRLDDEDLNKLNECFPCLQILNLIGVGGLKDPKIHLHQLKTCHWEVSNVPR----- 273

Query: 104 SSLTIYAPNLAKLELECDDPIALSIDAP 21
            SLTI APNL +LEL+C  P  L +D P
Sbjct: 274 -SLTIRAPNLVRLELKCVRPDMLILDTP 300


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