BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012004
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thal...   664   0.0  
ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   658   0.0  
ref|XP_002525197.1| meiotic recombination protein spo11, putativ...   654   0.0  
emb|CBI32617.3| unnamed protein product [Vitis vinifera]              653   0.0  
ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   653   0.0  

>ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
            gi|297806215|ref|XP_002870991.1| hypothetical protein
            ARALYDRAFT_487058 [Arabidopsis lyrata subsp. lyrata]
            gi|75335684|sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA
            topoisomerase 6 subunit A; Short=AtTOP6A; AltName:
            Full=Meiotic recombination protein SPO11-3;
            Short=AtSPO11-3; AltName: Full=Protein BRASSINOSTEROID
            INSENSITIVE 5; AltName: Full=Protein ROOT HAIRLESS 2
            gi|15488539|gb|AAL01152.1|AF323679_1 putative
            topoisomerase VI subunit A [Arabidopsis thaliana]
            gi|7413557|emb|CAB86036.1| meiosis specific-like protein
            [Arabidopsis thaliana] gi|12331186|emb|CAC24689.1|
            topoisomerase 6 subunit A [Arabidopsis thaliana]
            gi|114213517|gb|ABI54341.1| At5g02820 [Arabidopsis
            thaliana] gi|297316828|gb|EFH47250.1| hypothetical
            protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
            lyrata] gi|332003139|gb|AED90522.1| DNA topoisomerase 6
            subunit A [Arabidopsis thaliana]
          Length = 427

 Score =  664 bits (1714), Expect = 0.0
 Identities = 330/370 (89%), Positives = 352/370 (95%)
 Frame = +3

Query: 57   PVTXXXXXXXXXCREVTDLPLSSVQSEIETLALSLAKSILAGAGFSFAVPSRSAANQLYV 236
            P+T         CREV DL LSSVQ+EIET+ + +A+SILAG GFSF+VPSR+A+NQLYV
Sbjct: 58   PLTLADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLYV 117

Query: 237  PELDRIVLKDKTSIRPYASVATVRKTTITTRILQLIHQLSLKNIHVTKRDLFYTDVKLFQ 416
            PELDRIVLKDK+++RP+ASV++VRKTTITTRIL LIHQL L+NIHVTKRDLFYTDVKLFQ
Sbjct: 118  PELDRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLFQ 177

Query: 417  DQVQSDAVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 596
            DQ QSDAVLDDVSC+LGCTRSSLNV+AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP
Sbjct: 178  DQTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 237

Query: 597  NIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKM 776
            NIDRVGDMQSDA+FILLVEKDAAYMRLAEDRFYNRFPCII+TAKGQPDVATRLFLRKMKM
Sbjct: 238  NIDRVGDMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 297

Query: 777  ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 956
            ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ
Sbjct: 298  ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 357

Query: 957  CRLPMTEQDIKTGKDMLEEDFVKKNQGWVDELNLMVKSKQKAEIQALSSFGFQYLSEVYL 1136
            CRLPMTEQDIKTGKDMLEEDFVKKN GWV+ELNLMVK+KQKAEIQALSSFGFQYLSEVYL
Sbjct: 358  CRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 417

Query: 1137 PLKLQQQDWL 1166
            PLKLQQQDWL
Sbjct: 418  PLKLQQQDWL 427


>ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
            gi|449521501|ref|XP_004167768.1| PREDICTED: DNA
            topoisomerase 6 subunit A-like [Cucumis sativus]
          Length = 420

 Score =  658 bits (1697), Expect = 0.0
 Identities = 324/358 (90%), Positives = 348/358 (97%)
 Frame = +3

Query: 93   CREVTDLPLSSVQSEIETLALSLAKSILAGAGFSFAVPSRSAANQLYVPELDRIVLKDKT 272
            CREVTDL LSSVQ+ IE++ L +A+SIL+G GF+F VPSRS ANQLYVPELDRIVLKDKT
Sbjct: 63   CREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKT 122

Query: 273  SIRPYASVATVRKTTITTRILQLIHQLSLKNIHVTKRDLFYTDVKLFQDQVQSDAVLDDV 452
            ++RPYA+++TVRK+TITTRILQL+HQL +KNIHVTKRDLFYTDVKLFQDQ QSD+VLDDV
Sbjct: 123  ALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDV 182

Query: 453  SCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 632
            SCILGCTRSSLNV+AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA
Sbjct: 183  SCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 242

Query: 633  LFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKMELKLPVLALVDS 812
            LFILLVEKDAAY+RLAEDRFYNRFPCII+TAKGQPDVATRLFLRKMKMELKLPVLALVDS
Sbjct: 243  LFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDS 302

Query: 813  DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 992
            DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT
Sbjct: 303  DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 362

Query: 993  GKDMLEEDFVKKNQGWVDELNLMVKSKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 1166
            GKD+LEEDFVKKN GWV+EL+LMVK+KQKAEIQALSSFGFQYLSEVYLPLKLQQ+DWL
Sbjct: 363  GKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420


>ref|XP_002525197.1| meiotic recombination protein spo11, putative [Ricinus communis]
            gi|223535494|gb|EEF37163.1| meiotic recombination protein
            spo11, putative [Ricinus communis]
          Length = 421

 Score =  654 bits (1687), Expect = 0.0
 Identities = 329/388 (84%), Positives = 349/388 (89%)
 Frame = +3

Query: 3    VETLXXXXXXXXXXXXXNPVTXXXXXXXXXCREVTDLPLSSVQSEIETLALSLAKSILAG 182
            +ETL              P+T         CREVTDL LSSVQS IET+ LSL +SIL+G
Sbjct: 34   LETLNSLLQSTSSSSSSKPLTLSDLSLSATCREVTDLSLSSVQSVIETVVLSLTQSILSG 93

Query: 183  AGFSFAVPSRSAANQLYVPELDRIVLKDKTSIRPYASVATVRKTTITTRILQLIHQLSLK 362
             GFSF VPSR+A NQLYVPELDRIVLKDK ++RP+A +++VRK+TIT +IL L+HQL LK
Sbjct: 94   EGFSFNVPSRAATNQLYVPELDRIVLKDKNTLRPFAHISSVRKSTITAKILSLVHQLCLK 153

Query: 363  NIHVTKRDLFYTDVKLFQDQVQSDAVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDN 542
            NIHVTKRDLFYTDVKLFQDQ QSDAVLDDVSC+LGCTRSSLNVVAAEKGVVVGRLIFSDN
Sbjct: 154  NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDN 213

Query: 543  GDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIIT 722
            GDMIDCTKMGMGGKAIPPNIDRV DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCII+T
Sbjct: 214  GDMIDCTKMGMGGKAIPPNIDRVDDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVT 273

Query: 723  AKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 902
            AKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI
Sbjct: 274  AKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 333

Query: 903  KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNQGWVDELNLMVKSKQKA 1082
            KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFVKKN GWV+EL LMVK+KQKA
Sbjct: 334  KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKA 393

Query: 1083 EIQALSSFGFQYLSEVYLPLKLQQQDWL 1166
            EIQALSSFGFQYLSEVYLPLKLQQQDWL
Sbjct: 394  EIQALSSFGFQYLSEVYLPLKLQQQDWL 421


>emb|CBI32617.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  653 bits (1684), Expect = 0.0
 Identities = 324/358 (90%), Positives = 343/358 (95%)
 Frame = +3

Query: 93   CREVTDLPLSSVQSEIETLALSLAKSILAGAGFSFAVPSRSAANQLYVPELDRIVLKDKT 272
            CREV DL LSSVQS IETL L L  SIL+G GFSF+VPSRS+ANQLYVPELDRIVLKDK+
Sbjct: 106  CREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRIVLKDKS 165

Query: 273  SIRPYASVATVRKTTITTRILQLIHQLSLKNIHVTKRDLFYTDVKLFQDQVQSDAVLDDV 452
            S+RP+A+V+TVRK+ +TTRILQLIHQL  KNIHVTKRDLFYTDVKLFQDQ QSD+VLDDV
Sbjct: 166  SLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDV 225

Query: 453  SCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 632
            SC+LGCTRSSLNV+A+EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA
Sbjct: 226  SCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 285

Query: 633  LFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKMELKLPVLALVDS 812
            LFILLVEKDAAY+RLAEDRFYNRFPCII+TAKGQPDVATRLFLRKMK ELKLPVLALVDS
Sbjct: 286  LFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPVLALVDS 345

Query: 813  DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 992
            DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDIKT
Sbjct: 346  DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPMTEQDIKT 405

Query: 993  GKDMLEEDFVKKNQGWVDELNLMVKSKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 1166
            GKD+LEEDFVKKN GWV+ELNLMVK+KQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL
Sbjct: 406  GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 463


>ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
          Length = 420

 Score =  653 bits (1684), Expect = 0.0
 Identities = 324/358 (90%), Positives = 343/358 (95%)
 Frame = +3

Query: 93   CREVTDLPLSSVQSEIETLALSLAKSILAGAGFSFAVPSRSAANQLYVPELDRIVLKDKT 272
            CREV DL LSSVQS IETL L L  SIL+G GFSF+VPSRS+ANQLYVPELDRIVLKDK+
Sbjct: 63   CREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRIVLKDKS 122

Query: 273  SIRPYASVATVRKTTITTRILQLIHQLSLKNIHVTKRDLFYTDVKLFQDQVQSDAVLDDV 452
            S+RP+A+V+TVRK+ +TTRILQLIHQL  KNIHVTKRDLFYTDVKLFQDQ QSD+VLDDV
Sbjct: 123  SLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDV 182

Query: 453  SCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 632
            SC+LGCTRSSLNV+A+EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA
Sbjct: 183  SCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 242

Query: 633  LFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKMELKLPVLALVDS 812
            LFILLVEKDAAY+RLAEDRFYNRFPCII+TAKGQPDVATRLFLRKMK ELKLPVLALVDS
Sbjct: 243  LFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPVLALVDS 302

Query: 813  DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 992
            DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDIKT
Sbjct: 303  DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPMTEQDIKT 362

Query: 993  GKDMLEEDFVKKNQGWVDELNLMVKSKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 1166
            GKD+LEEDFVKKN GWV+ELNLMVK+KQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL
Sbjct: 363  GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 420