BLASTX nr result

ID: Bupleurum21_contig00011983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011983
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79216.1| hypothetical protein VITISV_012793 [Vitis vinifera]   214   1e-53
emb|CBI21872.3| unnamed protein product [Vitis vinifera]              214   2e-53
ref|XP_003633267.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease...   209   4e-52
ref|XP_002515263.1| hypothetical protein RCOM_1346560 [Ricinus c...   198   7e-49
ref|XP_004168460.1| PREDICTED: uncharacterized protein LOC101229...   182   7e-44

>emb|CAN79216.1| hypothetical protein VITISV_012793 [Vitis vinifera]
          Length = 743

 Score =  214 bits (545), Expect = 1e-53
 Identities = 106/163 (65%), Positives = 130/163 (79%)
 Frame = +3

Query: 39   LNNDYRSCFTRVRIHAYKDGVFEDGAVVCAPHLSDLAILTSRSDTDKFELQISPILLKSY 218
            +N++   CF RV +HAYK+G FE+GAVVCAPHLSD+++ TSRS + +  LQI    ++SY
Sbjct: 581  INSERNLCFLRVLJHAYKEGSFEEGAVVCAPHLSDISMWTSRSRSTETGLQIPQSSVRSY 640

Query: 219  FVQQPSGKWDLHQSSDSVVGESHRWPIGFVTTGFVYGSKKPVAGALCEAVLLARLREEQW 398
            F +Q SGKW+L    D+V  ES+R PIGFVTTGFV GSKK  A ALCEA+LLARLREEQW
Sbjct: 641  FKEQSSGKWELQIPEDTVTRESNRQPIGFVTTGFVRGSKKLKAEALCEAILLARLREEQW 700

Query: 399  NALPAKRRRKEIYVLVRNLRSTAYRLALAEIVLEQQQHDLDYM 527
            N +P K RRKEIYVLVRNLRSTAYRLALA I+LEQQ+ D+++M
Sbjct: 701  NEMPMKERRKEIYVLVRNLRSTAYRLALATIILEQQEEDVEFM 743


>emb|CBI21872.3| unnamed protein product [Vitis vinifera]
          Length = 806

 Score =  214 bits (544), Expect = 2e-53
 Identities = 106/163 (65%), Positives = 130/163 (79%)
 Frame = +3

Query: 39   LNNDYRSCFTRVRIHAYKDGVFEDGAVVCAPHLSDLAILTSRSDTDKFELQISPILLKSY 218
            +N++   CF RV +HAYK+G FE+GAVVCAPHLSD+++ TSRS + +  LQI    ++SY
Sbjct: 644  INSERNLCFLRVLLHAYKEGSFEEGAVVCAPHLSDISMWTSRSRSTETGLQIPQSSVRSY 703

Query: 219  FVQQPSGKWDLHQSSDSVVGESHRWPIGFVTTGFVYGSKKPVAGALCEAVLLARLREEQW 398
            F +Q SGKW+L    D+V  ES+R PIGFVTTGFV GSKK  A ALCEA+LLARLREEQW
Sbjct: 704  FKEQSSGKWELQIPEDTVTRESNRQPIGFVTTGFVRGSKKLKAEALCEAILLARLREEQW 763

Query: 399  NALPAKRRRKEIYVLVRNLRSTAYRLALAEIVLEQQQHDLDYM 527
            N +P K RRKEIYVLVRNLRSTAYRLALA I+LEQQ+ D+++M
Sbjct: 764  NEMPMKERRKEIYVLVRNLRSTAYRLALATIILEQQEEDVEFM 806


>ref|XP_003633267.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleases P/MRP protein subunit
            POP1-like [Vitis vinifera]
          Length = 745

 Score =  209 bits (532), Expect = 4e-52
 Identities = 106/164 (64%), Positives = 130/164 (79%), Gaps = 1/164 (0%)
 Frame = +3

Query: 39   LNNDYRSCFTRVRIHAYKDGVFEDGAVVCAPHLSDLAILTSR-SDTDKFELQISPILLKS 215
            +N++   CF RV +HAYK+G FE+GAVVCAPHLSD+++ TSR S + +  LQI    ++S
Sbjct: 582  INSERNLCFLRVLLHAYKEGSFEEGAVVCAPHLSDISMWTSRXSRSTETGLQIPQSSVRS 641

Query: 216  YFVQQPSGKWDLHQSSDSVVGESHRWPIGFVTTGFVYGSKKPVAGALCEAVLLARLREEQ 395
            YF +Q SGKW+L    D+V  ES+R PIGFVTTGFV GSKK  A ALCEA+LLARLREEQ
Sbjct: 642  YFKEQSSGKWELQIPEDTVTRESNRQPIGFVTTGFVRGSKKLKAEALCEAILLARLREEQ 701

Query: 396  WNALPAKRRRKEIYVLVRNLRSTAYRLALAEIVLEQQQHDLDYM 527
            WN +P K RRKEIYVLVRNLRSTAYRLALA I+LEQQ+ D+++M
Sbjct: 702  WNEMPMKERRKEIYVLVRNLRSTAYRLALATIILEQQEEDVEFM 745


>ref|XP_002515263.1| hypothetical protein RCOM_1346560 [Ricinus communis]
            gi|223545743|gb|EEF47247.1| hypothetical protein
            RCOM_1346560 [Ricinus communis]
          Length = 838

 Score =  198 bits (504), Expect = 7e-49
 Identities = 98/160 (61%), Positives = 125/160 (78%)
 Frame = +3

Query: 48   DYRSCFTRVRIHAYKDGVFEDGAVVCAPHLSDLAILTSRSDTDKFELQISPILLKSYFVQ 227
            D + CF RV +HA K+GVFE+GAV+CAP L DL++ TSRS+ ++   QI      SYF +
Sbjct: 680  DCKLCFVRVLLHACKEGVFEEGAVICAPCLGDLSLWTSRSERNEAGFQIPQSYGSSYFKE 739

Query: 228  QPSGKWDLHQSSDSVVGESHRWPIGFVTTGFVYGSKKPVAGALCEAVLLARLREEQWNAL 407
            Q SG+W+L    +++  ES+RWPIGFVTTGFV GSKKPVA ALCEAVLLARLRE+QWN +
Sbjct: 740  QSSGRWELQLPENAIARESYRWPIGFVTTGFVRGSKKPVAEALCEAVLLARLREKQWNEI 799

Query: 408  PAKRRRKEIYVLVRNLRSTAYRLALAEIVLEQQQHDLDYM 527
              ++RRKEIYVLVRNLRS+ YRL +A IVLEQQ+ DL+++
Sbjct: 800  SVQQRRKEIYVLVRNLRSSTYRLGVASIVLEQQE-DLEFL 838


>ref|XP_004168460.1| PREDICTED: uncharacterized protein LOC101229548 [Cucumis sativus]
          Length = 845

 Score =  182 bits (461), Expect = 7e-44
 Identities = 92/160 (57%), Positives = 119/160 (74%), Gaps = 2/160 (1%)
 Frame = +3

Query: 54   RSCFTRVRIHAYKDGVFEDGAVVCAPHLSDLAILTSRSDTDKFELQISPILLKSYFV--Q 227
            +SCF RV + AYK G FE+GAV+CAP  +DL++ TSRS  ++  LQI    +K YF   Q
Sbjct: 687  KSCFLRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSVDEERALQIPESAVKHYFKLKQ 746

Query: 228  QPSGKWDLHQSSDSVVGESHRWPIGFVTTGFVYGSKKPVAGALCEAVLLARLREEQWNAL 407
            Q    W+L    D V  E HRWPIGFVTTGFV+GSKKPVA  LCEA LLARLR +QW+ +
Sbjct: 747  QSPSMWELQLPEDDVAREYHRWPIGFVTTGFVHGSKKPVAEGLCEATLLARLRVQQWDGM 806

Query: 408  PAKRRRKEIYVLVRNLRSTAYRLALAEIVLEQQQHDLDYM 527
             AK ++++IYVLVRNLRS+AYR+ALA ++LEQ++ DL++M
Sbjct: 807  FAK-KKEQIYVLVRNLRSSAYRVALATVILEQREDDLEFM 845


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